Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 5.1e-108 394.4 201 100.0
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 1.1e-20 104.4 198 37.4
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 1.4e-20 104.0 199 37.2
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 1.8e-20 103.6 204 37.7
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.8e-20 103.6 201 38.3
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 2.6e-19 99.8 208 35.6
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.3e-15 87.4 82 53.7
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 1.3e-15 87.4 202 32.7
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 1.1e-14 84.3 83 53.0
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 1.1e-14 84.3 83 53.0
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 1.9e-14 83.6 83 53.0
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 2.1e-13 80.1 83 51.8
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 4.5e-11 72.4 88 43.2
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 3.8e-10 69.3 86 47.7
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 1.1e-09 67.8 74 48.6
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 1.4e-09 67.4 82 46.3
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.9e-09 67.0 110 36.4
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 2.4e-09 66.6 115 36.5
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 2.4e-09 66.6 74 47.3
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.6e-08 63.9 112 40.2
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 4.6e-08 62.4 191 28.8
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 7.9e-08 61.6 114 37.7
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 7.9e-08 61.6 112 39.3
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.0e-07 61.2 73 46.6
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.0e-07 61.2 99 36.4
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 1.3e-07 60.8 74 43.2
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.8e-07 60.5 105 40.0
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 2.3e-07 60.1 93 37.6
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 3.0e-07 59.7 210 28.6
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 3.9e-07 59.3 77 42.9
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 5.1e-07 58.9 74 44.6
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 5.1e-07 58.9 74 45.9
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 5.1e-07 58.9 77 45.5
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 5.1e-07 58.9 93 35.5
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 8.7e-07 58.2 69 44.9
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 8.7e-07 58.2 69 44.9
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 1.1e-06 57.8 77 44.2
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 1.1e-06 57.8 77 45.5
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.5e-06 57.4 91 37.4
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 1.5e-06 57.4 69 46.4
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 1.5e-06 57.4 74 45.9
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 1.9e-06 57.0 91 40.7
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 2.5e-06 56.6 68 47.1
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 2.5e-06 56.6 69 46.4
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 3.3e-06 56.2 69 43.5
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 4.3e-06 55.8 74 44.6
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 4.3e-06 55.8 70 45.7
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 5.6e-06 55.5 69 46.4
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 5.6e-06 55.5 69 44.9
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 5.6e-06 55.5 110 35.5
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 5.6e-06 55.5 69 43.5
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 5.6e-06 55.5 86 40.7
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 5.6e-06 55.5 96 42.7
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 9.6e-06 54.7 103 37.9
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 9.6e-06 54.7 69 47.8


User provided reference genes

Program Settings