Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20963 Utricularia gibba HOM05D005340 ORTHO05D006693 1.4e-57 226.1 113 100.0
Migut.H00210 Erythranthe guttata HOM05D005340 ORTHO05D006693 5.2e-25 117.9 111 54.1
Cc07_g08850 Coffea canephora HOM05D005340 ORTHO05D006693 2.2e-23 112.5 110 53.6
SalBow3G0764 Salvia bowleyana HOM05D005340 ORTHO05D006693 2.9e-23 112.1 110 51.8
Lj2A443T58 Lonicera japonica HOM05D005340 ORTHO05D006693 6.4e-23 110.9 115 50.4
Ah.16g101850 Amaranthus hybridus HOM05D005340 ORTHO05D006693 3.2e-22 108.6 110 51.8
Dinv34831 Davidia involucrata HOM05D005340 ORTHO05D006693 5.4e-22 107.8 114 50.9
SGA_v2.0_scaffold33G13479 Striga asiatica HOM05D005340 ORTHO05D006693 5.4e-22 107.8 110 52.7
CiPaw.06G148800 Carya illinoinensis HOM05D005340 ORTHO05D006693 1.2e-21 106.7 109 49.5
QL02p098613 Quercus lobata HOM05D005340 ORTHO05D006693 1.2e-21 106.7 110 46.4
GSVIVG01031043001 Vitis vinifera HOM05D005340 ORTHO05D006693 2.7e-21 105.5 113 48.7
Sopen02g030540 Solanum pennellii HOM05D005340 ORTHO05D006693 3.5e-21 105.1 111 48.6
PGSC0003DMG400012671 Solanum tuberosum HOM05D005340 ORTHO05D006693 5.9e-21 104.4 111 47.7
Nitab4.5_0001569g0090 Nicotiana tabacum HOM05D005340 ORTHO05D006693 1.0e-20 103.6 111 49.5
DCAR_025917 Daucus carota HOM05D005340 ORTHO05D006693 3.0e-20 102.1 113 46.9
Eucgr.F02485 Eucalyptus grandis HOM05D005340 ORTHO05D006693 3.0e-20 102.1 112 48.2
Rhsim08G0081700 Rhododendron simsii HOM05D005340 ORTHO05D006693 3.0e-20 102.1 113 49.6
vmacro18081 Vaccinium macrocarpon HOM05D005340 ORTHO05D006693 3.9e-20 101.7 114 50.9
Atru.chr1.1714 Acer truncatum HOM05D005340 ORTHO05D006693 6.6e-20 100.9 114 51.8
MD15G1418600 Malus domestica HOM05D005340 ORTHO05D006693 6.6e-20 100.9 110 45.5
CiPaw.05G042900 Carya illinoinensis HOM05D005340 ORTHO05D006693 1.1e-19 100.1 109 45.9
CAN.G625.8 Capsicum annuum HOM05D005340 ORTHO05D006693 1.5e-19 99.8 113 46.0
TAR371G0529 Trochodendron aralioides HOM05D005340 ORTHO05D006693 1.9e-19 99.4 113 46.9
Haze_01628 Corylus avellana HOM05D005340 ORTHO05D006693 2.5e-19 99.0 111 45.9
Actinidia17633 Actinidia chinensis HOM05D005340 ORTHO05D006693 3.3e-19 98.6 114 49.1
Oeu030776.1 Olea europaea HOM05D005340 ORTHO05D006693 3.3e-19 98.6 99 52.5
Duzib151G0269 Durio zibethinus HOM05D005340 ORTHO05D006693 4.3e-19 98.2 129 46.5
Manes.01G109700 Manihot esculenta HOM05D005340 ORTHO05D006693 4.3e-19 98.2 119 48.7
Nitab4.5_0005199g0080 Nicotiana tabacum HOM05D005340 ORTHO05D006693 5.6e-19 97.8 111 45.9
Hund16143 Selenicereus undatus HOM05D005340 ORTHO05D006693 9.5e-19 97.1 110 47.3
EL10Ac2g04584 Beta vulgaris HOM05D005340 ORTHO05D006693 2.8e-18 95.5 112 48.2
Cfa015491 Carpinus fangiana HOM05D005340 ORTHO05D006693 2.8e-18 95.5 111 45.9
FAN04G0654 Fragaria x ananassa HOM05D005340 ORTHO05D006693 2.8e-18 95.5 98 45.9
FAN08G3454 Fragaria x ananassa HOM05D005340 ORTHO05D006693 2.8e-18 95.5 98 45.9
Gohir.D09G205800 Gossypium hirsutum HOM05D005340 ORTHO05D006693 2.8e-18 95.5 130 46.2
Gorai.006G229700 Gossypium raimondii HOM05D005340 ORTHO05D006693 2.8e-18 95.5 130 46.2
Peaxi162Scf00814g00228 Petunia axillaris HOM05D005340 ORTHO05D006693 2.8e-18 95.5 96 51.0
TWI74G0404 Tripterygium wilfordii HOM05D005340 ORTHO05D006693 2.8e-18 95.5 115 44.3
TAR622G0300 Trochodendron aralioides HOM05D005340 ORTHO05D006693 3.6e-18 95.1 114 45.6
AUR62023320 Chenopodium quinoa HOM05D005340 ORTHO05D006693 4.7e-18 94.7 112 48.2
FvH4_5g30090 Fragaria vesca HOM05D005340 ORTHO05D006693 4.7e-18 94.7 98 45.9
CSS0006515 Camellia sinensis var. sinensis HOM05D005340 ORTHO05D006693 6.2e-18 94.4 102 51.0
COL.COLO4_05461 Corchorus olitorius HOM05D005340 ORTHO05D006693 6.2e-18 94.4 129 45.0
Potri.017G114100 Populus trichocarpa HOM05D005340 ORTHO05D006693 6.2e-18 94.4 118 47.5
CANSAT54G1996 Cannabis sativa HOM05D005340 ORTHO05D006693 8.0e-18 94.0 113 46.0
PSO541G3461 Papaver somniferum HOM05D005340 ORTHO05D006693 8.0e-18 94.0 113 49.6
PSO675G0345 Papaver somniferum HOM05D005340 ORTHO05D006693 8.0e-18 94.0 113 49.6
RcHm_v2.0_Chr7g0224281 Rosa chinensis HOM05D005340 ORTHO05D006693 8.0e-18 94.0 110 44.5
FAN13G0075 Fragaria x ananassa HOM05D005340 ORTHO05D006693 1.1e-17 93.6 98 44.9
Thecc.04G135300 Theobroma cacao HOM05D005340 ORTHO05D006693 1.1e-17 93.6 129 45.0
PSO782G4549 Papaver somniferum HOM05D005340 ORTHO05D006693 1.4e-17 93.2 113 49.6
HanXRQChr11g0325001 Helianthus annuus HOM05D005340 ORTHO05D006693 2.3e-17 92.4 118 46.6
Prupe.1G562700 Prunus persica HOM05D005340 ORTHO05D006693 3.1e-17 92.0 110 42.7
AUR62008983 Chenopodium quinoa HOM05D005340 ORTHO05D006693 8.9e-17 90.5 112 46.4
Gohir.A09G212300 Gossypium hirsutum HOM05D005340 ORTHO05D006693 8.9e-17 90.5 129 41.9
PGR142G3832 Punica granatum HOM05D005340 ORTHO05D006693 1.2e-16 90.1 113 46.0
Lsat_1_v5_gn_4_153740 Lactuca sativa HOM05D005340 ORTHO05D006693 2.0e-16 89.4 111 45.9
Aqoxy5G01062 Aquilegia oxysepala HOM05D005340 ORTHO05D006693 4.4e-16 88.2 113 41.6
Glyma.13G046500 Glycine max HOM05D005340 ORTHO05D006693 4.4e-16 88.2 110 45.5
Phvul.002G243400 Phaseolus vulgaris HOM05D005340 ORTHO05D006693 4.4e-16 88.2 113 45.1
TWI77G0603 Tripterygium wilfordii HOM05D005340 ORTHO05D006693 4.4e-16 88.2 115 45.2
Sp7g03590 Schrenkiella parvula HOM05D005340 ORTHO05D006693 5.8e-16 87.8 119 42.0
VMungo1127G2281 Vigna mungo HOM05D005340 ORTHO05D006693 7.5e-16 87.4 114 44.7
CARHR291850 Cardamine hirsuta HOM05D005340 ORTHO05D006693 1.7e-15 86.3 108 45.4
ClCG05G011750 Citrullus lanatus HOM05D005340 ORTHO05D006693 1.7e-15 86.3 110 42.7
Sed0021828 Sechium edule HOM05D005340 ORTHO05D006693 1.7e-15 86.3 111 41.4
arahy.Tifrunner.gnm1.ann1.HD0QD7 Arachis hypogaea HOM05D005340 ORTHO05D006693 2.2e-15 85.9 116 44.0
Sabra04G0079500 Salix brachista HOM05D005340 ORTHO05D006693 2.2e-15 85.9 113 43.4
MELO3C023794.2 Cucumis melo HOM05D005340 ORTHO05D006693 2.9e-15 85.5 109 41.3
MELO3C031783.2 Cucumis melo HOM05D005340 ORTHO05D006693 2.9e-15 85.5 109 41.3
Os07g0164500 Oryza sativa ssp. japonica HOM05D005340 ORTHO05D006693 2.9e-15 85.5 110 39.1
ATR0618G222 Amborella trichopoda HOM05D005340 ORTHO05D006693 3.7e-15 85.1 106 44.3
Potri.004G100500 Populus trichocarpa HOM05D005340 ORTHO05D006693 3.7e-15 85.1 119 43.7
Aa31LG9G17070 Aethionema arabicum HOM05D005340 ORTHO05D006693 6.4e-15 84.3 116 42.2
AL7G52120 Arabidopsis lyrata HOM05D005340 ORTHO05D006693 8.3e-15 84.0 119 40.3
BcaB06g27224 Brassica carinata HOM05D005340 ORTHO05D006693 8.3e-15 84.0 119 41.2
AT5G38460 Arabidopsis thaliana HOM05D005340 ORTHO05D006693 1.1e-14 83.6 119 40.3
Thhalv10027717m.g Eutrema salsugineum HOM05D005340 ORTHO05D006693 1.1e-14 83.6 108 42.6
Sc10g0001220 Simmondsia chinensis HOM05D005340 ORTHO05D006693 1.1e-14 83.6 100 46.0
arahy.Tifrunner.gnm1.ann1.2X25WT Arachis hypogaea HOM05D005340 ORTHO05D006693 1.4e-14 83.2 106 45.3
Carub.0007s3744 Capsella rubella HOM05D005340 ORTHO05D006693 1.4e-14 83.2 119 40.3
Nn8g41264 Nelumbo nucifera HOM05D005340 ORTHO05D006693 2.4e-14 82.4 113 38.9
Ciclev10011466m.g Citrus clementina HOM05D005340 ORTHO05D006693 4.1e-14 81.6 120 41.7
Lj2g0006310 Lotus japonicus HOM05D005340 ORTHO05D006693 4.1e-14 81.6 115 44.3
CsaV3_3G020610 Cucumis sativus L. HOM05D005340 ORTHO05D006693 5.4e-14 81.3 110 41.8
Phvul.004G064500 Phaseolus vulgaris HOM05D005340 ORTHO05D006693 2.7e-13 79.0 114 42.1
TPR.G32458 Trifolium pratense HOM05D005340 ORTHO05D006693 2.7e-13 79.0 117 42.7
Lalb_Chr06g0174621 Lupinus albus HOM05D005340 ORTHO05D006693 3.5e-13 78.6 113 43.4
Psat1g075120 Pisum sativum HOM05D005340 ORTHO05D006693 4.6e-13 78.2 117 40.2
BcaC02g09648 Brassica carinata HOM05D005340 ORTHO05D006693 6.0e-13 77.8 114 43.9
THA.LOC104823863 Tarenaya hassleriana HOM05D005340 ORTHO05D006693 6.0e-13 77.8 123 39.8
C04p45110 Brassica napus HOM05D005340 ORTHO05D006693 1.0e-12 77.0 114 43.9
BolC4t26090H Brassica oleracea HOM05D005340 ORTHO05D006693 1.0e-12 77.0 114 43.9
SHI22415 Sapria himalayana HOM05D005340 ORTHO05D006693 1.3e-12 76.6 99 46.5
A04p11420 Brassica napus HOM05D005340 ORTHO05D006693 6.6e-12 74.3 117 39.3
BraA04t16805Z Brassica rapa HOM05D005340 ORTHO05D006693 6.6e-12 74.3 117 39.3
Mapoly0037s0055 Marchantia polymorpha HOM05D005340 ORTHO05D006693 9.5e-11 70.5 105 38.1
Solyc02g085860.4 Solanum lycopersicum HOM05D005340 ORTHO05D006693 9.5e-11 70.5 65 55.4
Pp3c19_22340 Physcomitrium patens HOM05D005340 ORTHO05D006693 1.2e-10 70.1 119 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1419 Anthoceros agrestis HOM05D005340 ORTHO05D006693 2.8e-10 68.9 102 40.2
arahy.Tifrunner.gnm1.ann1.LI5PMJ Arachis hypogaea HOM05D005340 ORTHO05D006693 1.4e-09 66.6 89 43.8
SMO196G0061 Selaginella moellendorffii HOM05D005340 ORTHO05D006693 2.0e-08 62.8 110 39.1
TAR362G0130 Trochodendron aralioides HOM05D005340 ORTHO05D006693 1.1e-06 57.0 68 47.1


User provided reference genes

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