Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 1.8e-165 585.9 296 100.0
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 7.1e-98 361.3 257 68.1
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 5.6e-95 351.7 275 63.6
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 7.3e-95 351.3 275 64.0
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 3.8e-91 339.0 253 65.2
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 4.9e-91 338.6 252 65.1
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 8.4e-91 337.8 263 63.1
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 7.1e-90 334.7 261 60.9
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.7e-89 332.8 264 61.7
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.7e-89 332.8 264 61.7
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 6.0e-89 331.6 268 59.7
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 6.0e-89 331.6 255 64.7
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 6.0e-89 331.6 269 59.5
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 6.0e-89 331.6 252 63.9
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 1.0e-88 330.9 278 58.6
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.7e-88 330.1 250 63.2
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 1.7e-88 330.1 252 62.7
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 3.0e-88 329.3 274 59.5
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 3.0e-88 329.3 264 61.0
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 3.9e-88 328.9 252 62.7
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 5.1e-88 328.6 272 59.6
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 6.6e-88 328.2 269 59.5
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 8.7e-88 327.8 264 61.0
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 1.1e-87 327.4 284 56.0
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.1e-87 327.4 252 61.9
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 1.1e-87 327.4 261 59.0
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 1.1e-87 327.4 248 63.3
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 1.5e-87 327.0 252 62.3
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 2.5e-87 326.2 252 63.1
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 3.3e-87 325.9 269 59.5
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 3.3e-87 325.9 252 62.3
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 4.3e-87 325.5 252 61.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 5.6e-87 325.1 269 58.4
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 5.6e-87 325.1 266 59.8
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 5.6e-87 325.1 252 60.3
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 9.6e-87 324.3 251 63.3
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 1.3e-86 323.9 252 61.1
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.3e-86 323.9 256 62.1
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 1.6e-86 323.6 250 62.4
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.6e-86 323.6 285 58.9
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 2.1e-86 323.2 269 58.0
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.1e-86 323.2 252 60.7
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 2.8e-86 322.8 295 56.9
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 4.8e-86 322.0 252 61.9
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 4.8e-86 322.0 251 62.2
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 6.2e-86 321.6 256 60.9
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 1.1e-85 320.9 252 60.3
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 1.1e-85 320.9 255 60.4
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 1.1e-85 320.9 254 61.0
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.4e-85 320.5 293 54.3
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 1.8e-85 320.1 263 61.6
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 1.8e-85 320.1 252 61.9
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 2.4e-85 319.7 266 58.6
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.4e-85 319.7 257 61.1
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 3.1e-85 319.3 252 61.5
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 3.1e-85 319.3 275 57.8
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 3.1e-85 319.3 275 58.9
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 5.3e-85 318.5 252 60.3
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 5.3e-85 318.5 251 61.0
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 9.0e-85 317.8 255 60.4
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 9.0e-85 317.8 250 61.6
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 9.0e-85 317.8 252 60.7
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 1.5e-84 317.0 270 57.4
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 1.5e-84 317.0 270 57.4
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.5e-84 317.0 252 60.3
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.5e-84 317.0 251 62.2
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 2.0e-84 316.6 276 58.0
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 9.9e-84 314.3 244 62.3
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.7e-83 313.5 250 59.2
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 1.1e-82 310.8 252 59.9
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 7.1e-82 308.1 250 60.4
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 9.3e-82 307.8 292 52.7
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.7e-81 306.2 276 56.9
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 4.6e-81 305.4 276 54.7
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 6.0e-81 305.1 257 58.0
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 7.9e-81 304.7 251 57.8
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 7.9e-81 304.7 252 58.3
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 2.3e-80 303.1 226 68.6
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.1e-79 300.8 238 60.9
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 7.4e-79 298.1 256 58.6
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.3e-78 297.4 252 57.5
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.3e-78 297.4 251 57.0
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.3e-78 297.4 240 61.7
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 6.2e-78 295.0 252 56.7
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 1.4e-77 293.9 281 55.2
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.5e-76 290.4 276 55.1
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 9.9e-76 287.7 252 56.3
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 4.9e-75 285.4 241 60.2
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 1.6e-73 280.4 277 53.1
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 3.5e-73 279.3 252 55.2
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 7.9e-73 278.1 250 54.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.3e-71 272.3 252 50.8
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 4.3e-71 272.3 212 62.3
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.6e-70 270.4 219 61.2
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.8e-69 266.9 202 64.9
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 5.3e-69 265.4 218 60.1
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 2.6e-68 263.1 263 51.0
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.3e-67 260.8 257 49.0
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 2.9e-67 259.6 250 51.6
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 6.7e-56 221.9 241 46.5
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.4e-52 209.5 231 50.2
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 8.8e-48 194.9 315 36.8
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 8.8e-48 194.9 315 36.8
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 1.1e-47 194.5 264 43.2
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 2.0e-47 193.7 150 62.0
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.4e-42 177.6 337 34.4
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 3.6e-41 172.9 124 68.5
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 9.1e-37 158.3 433 27.3
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 1.2e-36 157.9 168 50.6
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 2.2e-35 153.7 156 52.6
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 2.3e-32 143.7 84 79.8
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.0e-32 142.9 150 48.0
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 7.5e-31 138.7 162 43.2
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 9.1e-29 131.7 288 33.3
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 1.5e-26 124.4 119 47.9
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 2.0e-23 114.0 260 30.0
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 4.1e-13 79.7 71 57.7
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.2e-12 78.2 61 59.0
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.9e-10 70.9 51 72.5
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.2e-07 61.6 89 38.2
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.7e-06 56.6 99 38.4


User provided reference genes

Program Settings