Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 1.2e-92 343.2 180 100.0
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 4.4e-18 95.5 186 36.0
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 5.4e-16 88.6 209 35.9
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 1.2e-15 87.4 201 36.3
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 1.2e-15 87.4 192 36.5
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 7.8e-15 84.7 202 33.2
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 1.0e-14 84.3 195 34.9
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 1.7e-14 83.6 185 35.7
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 1.7e-14 83.6 224 33.9
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 3.0e-14 82.8 205 33.2
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 3.0e-14 82.8 208 31.7
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 5.0e-14 82.0 174 36.2
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 6.6e-14 81.6 220 33.2
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 6.6e-14 81.6 224 32.6
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.1e-13 80.9 190 33.7
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.5e-13 80.5 202 33.7
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 3.3e-13 79.3 221 31.7
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 5.6e-13 78.6 208 33.7
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 7.3e-13 78.2 206 32.5
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 7.3e-13 78.2 206 32.5
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 7.3e-13 78.2 206 32.5
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 9.5e-13 77.8 227 30.8
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 1.2e-12 77.4 218 31.2
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 1.6e-12 77.0 214 32.2
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 2.1e-12 76.6 185 34.6
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 3.6e-12 75.9 174 32.8
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 4.7e-12 75.5 228 31.6
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 8.0e-12 74.7 217 30.9
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 1.4e-11 73.9 210 30.5
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.4e-11 73.9 244 30.3
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.1e-11 72.8 206 31.1
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 3.1e-11 72.8 206 33.0
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 4.0e-11 72.4 200 33.5
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.2e-10 70.9 199 32.7
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.2e-10 70.9 199 32.7
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 2.0e-10 70.1 197 31.5
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 2.0e-10 70.1 229 32.8
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.0e-10 70.1 243 32.1
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.0e-10 70.1 229 32.8
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 2.6e-10 69.7 212 30.7
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 3.4e-10 69.3 208 33.2
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 4.4e-10 68.9 224 33.0
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 4.4e-10 68.9 246 29.3
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 5.8e-10 68.6 221 31.2
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 9.8e-10 67.8 219 31.1
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 1.7e-09 67.0 118 41.5
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 2.2e-09 66.6 230 29.1
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 2.9e-09 66.2 191 30.9
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 4.9e-09 65.5 197 31.0
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 8.3e-09 64.7 221 28.1
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 3.2e-08 62.8 204 30.9
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 3.2e-08 62.8 181 30.4
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 4.1e-08 62.4 231 29.9
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 5.4e-08 62.0 234 28.2
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 7.0e-08 61.6 225 28.9
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.2e-07 60.8 215 27.4
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 1.2e-07 60.8 202 27.7
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.2e-07 60.8 197 29.4
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 2.0e-07 60.1 243 30.0
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 3.5e-07 59.3 122 36.9
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 4.6e-07 58.9 228 27.6
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 4.6e-07 58.9 276 27.5
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 6.0e-07 58.5 232 29.3
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 7.8e-07 58.2 271 27.7


User provided reference genes

Program Settings