Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 4.8e-115 417.9 224 100.0
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 2.6e-68 262.7 207 66.7
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 2.4e-66 256.1 204 66.7
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 9.5e-63 244.2 203 63.5
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 6.8e-61 238.0 207 63.3
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 6.8e-61 238.0 205 62.9
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 1.2e-60 237.3 196 63.8
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.5e-60 236.9 202 64.4
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 2.0e-60 236.5 202 63.4
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 2.0e-60 236.5 202 63.9
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 5.8e-60 235.0 206 61.7
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 5.8e-60 235.0 207 62.3
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 9.9e-60 234.2 203 62.6
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 9.9e-60 234.2 201 63.2
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 1.7e-59 233.4 212 60.8
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.7e-59 233.4 209 60.8
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 3.7e-59 232.3 207 61.4
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 4.9e-59 231.9 187 64.7
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 6.4e-59 231.5 206 61.2
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 6.4e-59 231.5 206 61.2
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 8.4e-59 231.1 202 62.9
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 8.4e-59 231.1 204 62.3
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 1.1e-58 230.7 210 61.0
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 4.1e-58 228.8 204 59.8
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 5.4e-58 228.4 224 56.7
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 7.1e-58 228.0 201 61.7
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 7.1e-58 228.0 211 60.2
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 9.2e-58 227.6 202 61.4
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 1.2e-57 227.3 206 62.6
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 1.6e-57 226.9 202 60.9
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.6e-57 225.3 209 58.9
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 6.0e-57 224.9 186 62.9
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 1.0e-56 224.2 202 61.4
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 1.3e-56 223.8 202 60.9
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 1.7e-56 223.4 207 61.4
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 1.7e-56 223.4 209 60.3
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 2.3e-56 223.0 204 59.3
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 3.0e-56 222.6 206 61.7
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 6.6e-56 221.5 206 60.7
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 8.6e-56 221.1 206 59.2
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 8.6e-56 221.1 202 60.4
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 3.3e-55 219.2 202 62.4
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 7.3e-55 218.0 214 56.1
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 7.3e-55 218.0 206 59.7
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 7.3e-55 218.0 202 59.9
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 1.2e-54 217.2 202 60.4
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 2.1e-54 216.5 203 60.6
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 2.8e-54 216.1 205 58.5
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 2.8e-54 216.1 208 58.7
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 4.7e-54 215.3 202 57.9
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.2e-54 214.9 205 58.0
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 8.1e-54 214.5 203 57.1
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 1.1e-53 214.2 192 59.4
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 1.1e-53 214.2 203 57.1
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 1.1e-53 214.2 216 57.4
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 1.1e-53 214.2 203 58.1
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.4e-53 213.8 203 57.6
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 1.4e-53 213.8 184 60.9
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.4e-53 213.8 203 57.6
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 1.4e-53 213.8 184 60.9
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.4e-53 213.8 202 57.4
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.4e-53 213.8 202 57.4
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 1.8e-53 213.4 203 57.1
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 1.8e-53 213.4 203 58.6
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.8e-53 213.4 203 57.6
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.8e-53 213.4 205 58.0
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.8e-53 213.4 202 57.4
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.4e-53 213.0 205 57.6
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.1e-53 212.6 202 57.4
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.1e-53 212.6 202 57.4
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 4.0e-53 212.2 205 57.6
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 5.2e-53 211.8 202 59.4
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 8.9e-53 211.1 202 56.4
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 8.9e-53 211.1 202 56.4
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 1.2e-52 210.7 202 55.4
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 1.2e-52 210.7 202 57.4
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 1.5e-52 210.3 206 57.8
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 2.0e-52 209.9 202 57.4
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 2.0e-52 209.9 203 57.1
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 2.6e-52 209.5 204 56.9
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 3.4e-52 209.1 205 56.1
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 4.4e-52 208.8 203 58.1
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 7.6e-52 208.0 203 55.7
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 7.6e-52 208.0 213 56.3
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 9.9e-52 207.6 204 56.4
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 2.2e-51 206.5 203 56.7
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.8e-51 205.7 202 55.4
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 3.8e-51 205.7 239 53.6
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 8.4e-51 204.5 216 52.8
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 8.4e-51 204.5 201 56.7
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 1.1e-50 204.1 202 55.9
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 1.9e-50 203.4 203 55.7
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 2.1e-49 199.9 189 56.1
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 2.1e-49 199.9 201 56.2
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 2.1e-49 199.9 219 52.5
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 2.7e-49 199.5 161 67.7
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 3.5e-49 199.1 205 53.7
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 1.1e-47 194.1 182 57.1
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 7.3e-47 191.4 140 72.9
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 2.8e-46 189.5 164 59.1
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.1e-45 187.6 215 53.0
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.8e-43 179.1 161 56.5
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.8e-43 179.1 161 56.5
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 7.1e-42 174.9 200 52.0
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 2.7e-41 172.9 157 54.1
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 6.6e-40 168.3 179 54.7
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 1.6e-38 163.7 118 73.7
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 8.1e-38 161.4 365 34.0
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 1.4e-37 160.6 157 54.8
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.5e-36 157.1 129 61.2
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 7.6e-36 154.8 124 71.8
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 3.8e-35 152.5 129 58.9
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 1.2e-33 147.5 188 45.7
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 2.5e-31 139.8 188 41.5
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 6.9e-29 131.7 114 64.9
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 1.7e-27 127.1 201 42.8
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 3.8e-27 125.9 147 53.7
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 5.5e-26 122.1 207 36.7
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 7.9e-25 118.2 107 58.9
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.5e-23 114.0 130 49.2
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.1e-22 110.2 127 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 2.2e-19 100.1 174 37.9
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.8e-16 90.5 76 68.4
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 2.3e-16 90.1 63 68.3
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 4.3e-15 85.9 77 66.2
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.6e-14 84.0 77 62.3
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 1.0e-11 74.7 208 29.8
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 8.5e-11 71.6 80 43.8
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 3.2e-10 69.7 50 70.0
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 2.7e-09 66.6 60 61.7
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.4e-08 64.3 47 72.3


User provided reference genes

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