Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.0e-142 510.0 250 100.0
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 1.9e-99 366.3 214 79.4
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 4.1e-99 365.2 215 80.0
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 4.1e-99 365.2 215 79.5
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 7.8e-98 360.9 215 78.6
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 7.8e-98 360.9 215 78.1
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 1.0e-97 360.5 214 79.0
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.3e-97 360.1 215 78.1
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.7e-97 359.8 215 79.1
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 2.3e-97 359.4 214 79.0
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 3.9e-97 358.6 214 79.0
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 6.6e-97 357.8 215 78.1
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 6.6e-97 357.8 215 77.2
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.1e-96 357.1 215 78.1
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.9e-96 356.3 215 77.7
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 1.9e-96 356.3 215 77.7
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 2.5e-96 355.9 215 76.3
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 4.3e-96 355.1 215 77.2
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 4.3e-96 355.1 215 76.7
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 4.3e-96 355.1 215 76.3
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 5.6e-96 354.8 215 76.3
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.6e-96 354.8 215 77.2
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 5.6e-96 354.8 215 77.2
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 5.6e-96 354.8 215 76.7
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 7.3e-96 354.4 215 75.3
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 9.5e-96 354.0 214 78.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 9.5e-96 354.0 215 77.2
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.2e-95 353.6 215 76.3
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 1.6e-95 353.2 215 76.3
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 1.6e-95 353.2 215 76.3
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 2.8e-95 352.4 215 75.8
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.8e-95 352.4 215 77.2
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 3.6e-95 352.1 215 76.3
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 3.6e-95 352.1 215 77.7
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 3.6e-95 352.1 215 78.1
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.1e-94 350.5 214 75.7
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.3e-94 349.4 215 74.9
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 2.3e-94 349.4 215 76.3
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.3e-94 349.4 215 76.7
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 2.3e-94 349.4 214 74.8
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 3.1e-94 349.0 215 76.3
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.0e-94 348.6 215 75.8
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 6.8e-94 347.8 215 75.3
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 8.9e-94 347.4 214 75.7
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 8.9e-94 347.4 214 75.2
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 8.9e-94 347.4 215 76.7
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 8.9e-94 347.4 215 76.3
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.2e-93 347.1 214 75.2
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.2e-93 347.1 214 77.6
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.5e-93 346.7 215 75.8
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 2.0e-93 346.3 215 75.8
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 3.4e-93 345.5 215 74.9
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 4.4e-93 345.1 214 74.8
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 7.6e-93 344.4 214 76.2
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 7.6e-93 344.4 214 76.2
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 7.6e-93 344.4 214 76.2
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 7.6e-93 344.4 215 74.4
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 7.6e-93 344.4 215 74.9
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 9.9e-93 344.0 215 75.8
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.3e-92 343.6 215 74.4
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.3e-92 343.6 215 74.9
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.7e-92 343.2 215 74.9
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 1.7e-92 343.2 215 75.3
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.7e-92 343.2 215 75.3
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 2.2e-92 342.8 215 74.9
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.8e-92 342.0 215 74.9
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 3.8e-92 342.0 215 75.3
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.9e-92 341.7 214 75.2
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 4.9e-92 341.7 215 75.8
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 4.9e-92 341.7 214 73.4
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 6.4e-92 341.3 215 74.4
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 8.4e-92 340.9 215 74.9
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.1e-91 340.5 215 74.0
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.1e-91 340.5 215 74.4
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.1e-91 340.5 214 74.3
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 1.4e-91 340.1 215 72.6
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 1.4e-91 340.1 215 72.6
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.4e-91 340.1 215 74.9
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 1.4e-91 340.1 215 74.0
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 2.4e-91 339.3 215 74.0
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 2.4e-91 339.3 212 75.0
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 9.2e-91 337.4 215 74.0
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 2.1e-90 336.3 215 74.0
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 2.1e-90 336.3 215 71.6
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 3.5e-90 335.5 215 72.1
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 3.5e-90 335.5 215 72.1
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 4.6e-90 335.1 215 71.6
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 4.6e-90 335.1 215 71.6
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 4.6e-90 335.1 215 74.0
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 4.6e-90 335.1 215 74.0
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 6.0e-90 334.7 215 72.1
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 1.3e-89 333.6 203 77.3
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 3.0e-89 332.4 215 70.7
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 3.0e-89 332.4 215 70.7
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 6.6e-89 331.3 215 72.1
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 6.6e-89 331.3 215 73.5
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.5e-88 330.1 215 70.2
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 1.5e-88 330.1 210 71.4
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.3e-88 328.9 215 71.2
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 4.3e-88 328.6 215 73.0
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 5.6e-88 328.2 215 70.2
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 9.6e-88 327.4 273 60.1
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 1.1e-86 323.9 215 71.2
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 1.1e-86 323.9 215 71.2
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.4e-86 322.8 210 69.5
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.2e-85 320.5 210 72.9
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 2.0e-85 319.7 210 71.0
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.1e-83 313.9 214 67.8
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 4.2e-83 312.0 237 65.4
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.6e-82 310.1 215 66.5
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.9e-80 303.1 211 70.6
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.1e-79 299.7 215 67.0
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 2.8e-79 299.3 214 65.0
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.1e-78 295.8 214 62.6
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.1e-78 295.8 214 62.6
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 6.9e-78 294.7 201 68.2
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 3.4e-77 292.4 211 64.9
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 3.8e-76 288.9 214 61.7
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 2.4e-75 286.2 170 79.4
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 7.1e-75 284.6 214 64.0
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 8.7e-73 277.7 174 74.1
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 2.8e-71 272.7 174 71.8
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.8e-70 270.0 211 58.8
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 1.1e-62 244.2 239 54.8
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 9.6e-56 221.1 214 50.0
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 1.3e-47 194.1 213 46.0
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.2e-45 187.6 210 44.3
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 7.9e-42 174.9 213 43.7
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.3e-28 131.0 82 73.2
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.0e-25 121.3 82 67.1
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 3.0e-25 119.8 89 66.3
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-19 101.3 75 68.0
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.0e-13 80.5 66 57.6
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 7.7e-13 78.6 50 72.0
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 1.5e-11 74.3 42 71.4
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 1.6e-10 70.9 41 73.2
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 1.8e-09 67.4 42 66.7
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 2.2e-07 60.5 42 57.1


User provided reference genes

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