Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 0.0e+00 2505.7 1277 100.0
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 1.1e-304 1050.4 1965 37.9
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 2.8e-260 902.9 1931 36.0
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 3.8e-233 812.8 2008 33.1
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 5.7e-229 798.9 1799 35.1
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 7.5e-229 798.5 2002 32.1
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 8.6e-225 785.0 2007 31.7
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 2.5e-224 783.5 2015 32.2
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 6.1e-223 778.9 1960 32.3
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 2.4e-219 766.9 1996 32.2
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 2.4e-219 766.9 1946 32.4
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 5.9e-218 762.3 1989 32.3
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 2.3e-217 760.4 1994 31.6
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.9e-217 760.0 2010 31.8
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.5e-216 756.9 2016 31.5
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 6.1e-215 752.3 2005 31.8
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 8.0e-215 751.9 1791 33.0
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 3.7e-212 743.0 1985 31.6
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 6.4e-212 742.3 1991 31.2
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 7.0e-211 738.8 2030 31.0
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 3.9e-209 733.0 2002 31.2
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 3.9e-209 733.0 1987 31.6
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 6.6e-209 732.3 1984 31.1
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 8.6e-209 731.9 1984 30.7
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 2.8e-207 726.9 1988 30.9
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 2.8e-207 726.9 1986 30.8
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 1.8e-206 724.2 1961 32.0
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 5.2e-206 722.6 2012 31.2
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 6.8e-206 722.2 1990 31.4
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 2.0e-205 720.7 1967 31.1
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 4.4e-205 719.5 2007 31.0
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 4.4e-205 719.5 2038 30.0
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 2.9e-204 716.8 1855 31.6
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 6.4e-204 715.7 2012 30.0
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 1.4e-203 714.5 1984 30.2
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 2.7e-202 710.3 2008 30.3
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 6.0e-202 709.1 2038 30.3
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 1.3e-201 708.0 1984 30.2
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 2.5e-200 703.7 2038 30.8
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 3.3e-200 703.4 2008 30.7
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 7.3e-200 702.2 1968 30.5
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 1.6e-199 701.0 2018 30.2
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 3.6e-199 699.9 1994 30.2
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 8.1e-199 698.7 1988 30.4
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 4.0e-198 696.4 2006 30.2
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 2.6e-197 693.7 1992 30.5
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 2.9e-196 690.3 2006 30.2
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 1.9e-195 687.6 1965 30.1
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 3.5e-194 683.3 1811 31.4
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 2.3e-193 680.6 1947 30.5
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 8.6e-193 678.7 1981 29.9
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 1.5e-192 677.9 1966 30.3
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 9.5e-192 675.2 1987 29.3
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 1.4e-190 671.4 1990 29.5
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 1.5e-189 667.9 1992 29.2
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 2.0e-189 667.5 1964 29.9
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 7.6e-189 665.6 1986 29.5
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 3.8e-188 663.3 1512 33.6
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 4.9e-188 662.9 2016 29.9
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 1.1e-187 661.8 1938 30.6
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 4.2e-187 659.8 1993 29.1
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 4.6e-186 656.4 1999 29.4
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 3.0e-185 653.7 1925 30.8
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 1.5e-184 651.4 1943 29.9
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 1.9e-184 651.0 1934 29.8
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 2.5e-184 650.6 1941 30.5
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 5.6e-184 649.4 1927 30.4
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 9.6e-184 648.7 1955 30.2
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 9.6e-184 648.7 1941 30.6
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 1.6e-183 647.9 1943 29.7
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 8.1e-183 645.6 1937 29.4
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 2.4e-182 644.0 1942 29.2
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 6.9e-182 642.5 2018 29.2
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 6.9e-182 642.5 1940 29.8
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 6.9e-182 642.5 1940 29.8
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 4.4e-181 639.8 1939 29.7
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.3e-180 638.3 1882 30.1
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.1e-179 635.2 1910 30.0
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 6.6e-177 625.9 1994 29.1
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 6.6e-177 625.9 2010 29.4
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 1.8e-174 617.8 1996 28.9
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 3.5e-170 603.6 2017 28.3
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 3.0e-169 600.5 1989 28.8
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 3.3e-168 597.0 2106 29.0
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 6.9e-166 589.3 1996 28.3
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 5.5e-163 579.7 2034 28.1
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 7.1e-163 579.3 1895 28.9
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 1.2e-162 578.6 1900 28.4
Oeu025571.1 Olea europaea HOM05D005412 ORTHO05D006096 1.0e-156 558.9 1113 36.7
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 2.9e-148 530.8 2043 27.2
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 1.8e-129 468.4 1924 25.6
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 8.0e-122 443.0 1242 31.2
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.2e-119 434.9 1244 30.6
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 6.1e-114 416.8 1095 31.2
Actinidia12956 Actinidia chinensis HOM05D005412 ORTHO05D006096 2.6e-112 411.4 396 56.8
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 3.4e-112 411.0 1090 31.4
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 7.0e-110 403.3 487 50.1
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 1.8e-105 388.7 495 47.3
Oeu025573.1 Olea europaea HOM05D005412 ORTHO05D006096 3.4e-104 384.4 267 71.5
TPR.G30829 Trifolium pratense HOM05D005412 ORTHO05D006096 1.3e-100 372.5 559 42.2
FvH4_2g06211 Fragaria vesca HOM05D005412 ORTHO05D006096 1.7e-100 372.1 275 68.4
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 1.1e-99 369.4 397 51.1
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 6.4e-95 353.6 443 47.2
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 4.6e-93 347.4 478 43.1
AUR62016617 Chenopodium quinoa HOM05D005412 ORTHO05D006096 8.6e-92 343.2 273 64.1
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 5.6e-91 340.5 460 41.7
HPP92_028321 Vanilla planifolia HOM05D005412 ORTHO05D006096 4.7e-90 337.4 1221 28.0
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 1.1e-89 336.3 2102 21.9
AUR62016618 Chenopodium quinoa HOM05D005412 ORTHO05D006096 2.0e-88 332.0 509 42.6
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 3.7e-87 327.8 385 46.5
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 4.3e-75 287.7 465 38.7
Actinidia00446 Actinidia chinensis HOM05D005412 ORTHO05D006096 2.4e-73 282.0 268 56.3
Oeu003689.1 Olea europaea HOM05D005412 ORTHO05D006096 1.5e-72 279.3 238 60.1
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 5.4e-70 270.8 419 38.9
TPR.G30995 Trifolium pratense HOM05D005412 ORTHO05D006096 2.6e-64 251.9 198 60.1
SHI05374 Sapria himalayana HOM05D005412 ORTHO05D006096 2.1e-61 242.3 502 34.5
Actinidia12957 Actinidia chinensis HOM05D005412 ORTHO05D006096 6.2e-58 230.7 821 28.6
SMO196G0062 Selaginella moellendorffii HOM05D005412 ORTHO05D006096 1.0e-52 213.4 265 46.0
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 1.4e-49 203.0 216 50.0
Migut.B00336 Erythranthe guttata HOM05D005412 ORTHO05D006096 6.7e-44 184.1 314 38.9
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 3.3e-35 155.2 295 32.9
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 1.7e-31 142.9 249 35.7
Migut.B00338 Erythranthe guttata HOM05D005412 ORTHO05D006096 1.9e-30 139.4 278 33.5
SHI05371 Sapria himalayana HOM05D005412 ORTHO05D006096 6.7e-28 131.0 173 47.4
Hma1.2p1_0028F.1_g017490 Hydrangea macrophylla HOM05D005412 ORTHO05D006096 4.2e-22 111.7 83 63.9
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 6.7e-20 104.4 65 76.9
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 8.8e-20 104.0 67 73.1
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 4.4e-19 101.7 68 69.1
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 5.7e-19 101.3 67 70.1
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 4.8e-18 98.2 66 72.7
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-16 93.2 101 42.6
CsaV3_3G018530 Cucumis sativus L. HOM05D005412 ORTHO05D006096 4.5e-16 91.7 62 67.7
SHI05373 Sapria himalayana HOM05D005412 ORTHO05D006096 5.0e-15 88.2 316 27.8
MBI18_g07589_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D006096 6.5e-15 87.8 112 41.1
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 5.5e-14 84.7 210 29.0
MBI11_g39905_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 1.2e-13 83.6 112 40.2
Rhsim11G0175200 Rhododendron simsii HOM05D063897 ORTHO05D006096 1.4e-12 80.1 101 47.5
Hma1.2p1_0027F.1_g017200 Hydrangea macrophylla HOM05D005412 ORTHO05D006096 5.2e-12 78.2 49 73.5
BcaNung06609 Brassica carinata HOM05D005412 ORTHO05D006096 1.5e-11 76.6 56 71.4
TPR.G30833 Trifolium pratense HOM05D005412 ORTHO05D006096 2.6e-11 75.9 57 70.2
SHI05372 Sapria himalayana HOM05D005412 ORTHO05D006096 1.3e-07 63.5 46 63.0
CBR_g37896 Chara braunii HOM05D012618 ORTHO05D000497 3.2e-06 58.9 37 67.6
Migut.B00337 Erythranthe guttata HOM05D005412 ORTHO05D006096 7.2e-06 57.8 68 48.5


User provided reference genes

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