Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20701 Utricularia gibba HOM05D004672 ORTHO05D005732 1.4e-60 236.1 120 100.0
unitig_744.g24197 Utricularia gibba HOM05D004672 ORTHO05D005732 9.8e-14 80.5 51 78.4
Migut.B00522 Erythranthe guttata HOM05D004672 ORTHO05D005732 7.7e-11 70.9 49 73.5
MSTRG.16633 Avicennia marina HOM05D004672 ORTHO05D005732 1.0e-10 70.5 51 68.6
SGA_v2.0_scaffold83G26394 Striga asiatica HOM05D004672 ORTHO05D005732 1.0e-10 70.5 51 70.6
SalBow6G5524 Salvia bowleyana HOM05D004672 ORTHO05D005732 1.3e-10 70.1 51 68.6
Oeu033795.2 Olea europaea HOM05D004672 ORTHO05D005732 1.5e-09 66.6 49 67.3
Oeu042393.4 Olea europaea HOM05D004672 ORTHO05D005732 5.5e-09 64.7 51 62.7
Peaxi162Scf00016g03462 Petunia axillaris HOM05D004672 ORTHO05D005732 1.2e-08 63.5 49 61.2
Nitab4.5_0005163g0030 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.6e-08 63.2 49 63.3
ClCG09G016480 Citrullus lanatus HOM05D004672 ORTHO05D005732 2.1e-08 62.8 51 62.7
MELO3C018559.2 Cucumis melo HOM05D004672 ORTHO05D005732 2.1e-08 62.8 51 62.7
CsaV3_7G007430 Cucumis sativus L. HOM05D004672 ORTHO05D005732 2.1e-08 62.8 51 62.7
Sed0001753 Sechium edule HOM05D004672 ORTHO05D005732 2.1e-08 62.8 51 62.7
Sed0014665 Sechium edule HOM05D004672 ORTHO05D005732 2.8e-08 62.4 51 60.8
Solyc01g106220.4 Solanum lycopersicum HOM05D004672 ORTHO05D005732 2.8e-08 62.4 49 63.3
Sopen01g048630 Solanum pennellii HOM05D004672 ORTHO05D005732 2.8e-08 62.4 49 63.3
Nitab4.5_0002335g0010 Nicotiana tabacum HOM05D004672 ORTHO05D005732 3.6e-08 62.0 49 61.2
Nitab4.5_0005163g0020 Nicotiana tabacum HOM05D004672 ORTHO05D005732 3.6e-08 62.0 49 61.2
PGSC0003DMG400010676 Solanum tuberosum HOM05D004672 ORTHO05D005732 3.6e-08 62.0 49 63.3
TWI59G0488 Tripterygium wilfordii HOM05D004672 ORTHO05D005732 3.6e-08 62.0 50 62.0
ECA240G2418 Erigeron canadensis HOM05D004672 ORTHO05D005732 4.7e-08 61.6 46 67.4
Lj9C342T12 Lonicera japonica HOM05D004672 ORTHO05D005732 4.7e-08 61.6 49 67.3
Potri.001G285600 Populus trichocarpa HOM05D004672 ORTHO05D005732 6.1e-08 61.2 49 63.3
CiPaw.06G160900 Carya illinoinensis HOM05D004672 ORTHO05D005732 8.0e-08 60.8 51 58.8
MBI16_g10454_MAGBIO Magnolia biondii HOM05D004672 ORTHO05D005732 8.0e-08 60.8 50 58.0
Manes.10G094200 Manihot esculenta HOM05D004672 ORTHO05D005732 1.0e-07 60.5 51 58.8
CSS0013617 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 1.4e-07 60.1 49 61.2
CAN.G504.43 Capsicum annuum HOM05D004672 ORTHO05D005732 1.4e-07 60.1 50 56.0
HanXRQChr03g0071051 Helianthus annuus HOM05D004672 ORTHO05D005732 1.4e-07 60.1 51 64.7
CSS0000676 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 1.8e-07 59.7 50 60.0
CANSAT54G0310 Cannabis sativa HOM05D004672 ORTHO05D005732 1.8e-07 59.7 83 43.4
Haze_10395 Corylus avellana HOM05D004672 ORTHO05D005732 1.8e-07 59.7 49 59.2
Dinv08968 Davidia involucrata HOM05D004672 ORTHO05D005732 1.8e-07 59.7 49 63.3
Sabra09G0061900 Salix brachista HOM05D004672 ORTHO05D005732 1.8e-07 59.7 49 61.2
GSVIVG01038520001 Vitis vinifera HOM05D004672 ORTHO05D005732 1.8e-07 59.7 50 62.0
Actinidia02411 Actinidia chinensis HOM05D004672 ORTHO05D005732 2.3e-07 59.3 49 59.2
EL10Ac9g22127 Beta vulgaris HOM05D004672 ORTHO05D005732 2.3e-07 59.3 78 43.6
Cc02_g20590 Coffea canephora HOM05D004672 ORTHO05D005732 2.3e-07 59.3 49 61.2
Hma1.2p1_0908F.1_g235670 Hydrangea macrophylla HOM05D004672 ORTHO05D005732 2.3e-07 59.3 49 57.1
Thhalv10003522m.g Eutrema salsugineum HOM05D004672 ORTHO05D005732 3.0e-07 58.9 49 61.2
Prupe.8G075100 Prunus persica HOM05D004672 ORTHO05D005732 3.0e-07 58.9 49 61.2
CARHR278390 Cardamine hirsuta HOM05D004672 ORTHO05D005732 4.0e-07 58.5 49 61.2
Potri.009G079900 Populus trichocarpa HOM05D004672 ORTHO05D005732 4.0e-07 58.5 49 61.2
C03p61860 Brassica napus HOM05D004672 ORTHO05D005732 5.2e-07 58.2 49 59.2
BolC3t18446H Brassica oleracea HOM05D004672 ORTHO05D005732 5.2e-07 58.2 49 59.2
AT5G64420 Arabidopsis thaliana HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
A06p31080 Brassica napus HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
BraA06t26051Z Brassica rapa HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
Lsat_1_v5_gn_9_113661 Lactuca sativa HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
Lsat_1_v5_gn_9_113760 Lactuca sativa HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
MD05G1049800 Malus domestica HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
MD10G1056900 Malus domestica HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
Thecc.02G125000 Theobroma cacao HOM05D004672 ORTHO05D005732 6.8e-07 57.8 49 59.2
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 8.9e-07 57.4 51 54.9
DCAR_021895 Daucus carota HOM05D004672 ORTHO05D005732 8.9e-07 57.4 49 61.2
Eucgr.I02582 Eucalyptus grandis HOM05D004672 ORTHO05D005732 8.9e-07 57.4 49 57.1
PGR142G1680 Punica granatum HOM05D004672 ORTHO05D005732 8.9e-07 57.4 49 57.1
QL11p026607 Quercus lobata HOM05D004672 ORTHO05D005732 8.9e-07 57.4 51 56.9
Sp2g27510 Schrenkiella parvula HOM05D004672 ORTHO05D005732 8.9e-07 57.4 49 57.1
THA.LOC104818461 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 1.2e-06 57.0 49 59.2
Nn1g07286 Nelumbo nucifera HOM05D004672 ORTHO05D005732 1.5e-06 56.6 50 58.0
Sabra16G0178000 Salix brachista HOM05D004672 ORTHO05D005732 1.5e-06 56.6 49 63.3
TAR628G0793 Trochodendron aralioides HOM05D004672 ORTHO05D005732 1.5e-06 56.6 50 58.0
vmacro19391 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 1.5e-06 56.6 49 57.1
Carub.0008s2522 Capsella rubella HOM05D004672 ORTHO05D005732 2.0e-06 56.2 49 57.1
Phvul.006G199700 Phaseolus vulgaris HOM05D004672 ORTHO05D005732 2.0e-06 56.2 51 56.9
AL8G41790 Arabidopsis lyrata HOM05D004672 ORTHO05D005732 2.6e-06 55.8 49 57.1
Os02g0135700 Oryza sativa ssp. japonica HOM05D004672 ORTHO05D005732 2.6e-06 55.8 39 64.1
Ca_00181_v3 Cicer arietinum L. HOM05D004672 ORTHO05D005732 3.4e-06 55.5 46 60.9
Duzib132G0551 Durio zibethinus HOM05D004672 ORTHO05D005732 3.4e-06 55.5 49 57.1
FvH4_2g11160 Fragaria vesca HOM05D004672 ORTHO05D005732 3.4e-06 55.5 73 46.6
FAN20G2876 Fragaria x ananassa HOM05D004672 ORTHO05D005732 3.4e-06 55.5 73 46.6
FAN24G1132 Fragaria x ananassa HOM05D004672 ORTHO05D005732 3.4e-06 55.5 73 46.6
VMungo0540G1852 Vigna mungo HOM05D004672 ORTHO05D005732 3.4e-06 55.5 49 59.2
Aa31LG1G17480 Aethionema arabicum HOM05D004672 ORTHO05D005732 4.4e-06 55.1 49 57.1
arahy.Tifrunner.gnm1.ann1.GE1IDC Arachis hypogaea HOM05D004672 ORTHO05D005732 4.4e-06 55.1 59 44.1
Gohir.D13G048000 Gossypium hirsutum HOM05D004672 ORTHO05D005732 4.4e-06 55.1 47 59.6
RcHm_v2.0_Chr6g0269481 Rosa chinensis HOM05D004672 ORTHO05D005732 4.4e-06 55.1 50 60.0
TPR.G32637 Trifolium pratense HOM05D004672 ORTHO05D005732 4.4e-06 55.1 62 51.6
BcaC03g18261 Brassica carinata HOM05D004672 ORTHO05D005732 5.7e-06 54.7 49 53.1
Glyma.13G254600 Glycine max HOM05D004672 ORTHO05D005732 5.7e-06 54.7 44 63.6
Aqoxy6G00637 Aquilegia oxysepala HOM05D004672 ORTHO05D005732 7.5e-06 54.3 49 55.1
arahy.Tifrunner.gnm1.ann1.BVLY6P Arachis hypogaea HOM05D004672 ORTHO05D005732 7.5e-06 54.3 49 55.1
Zm00001eb231630 Zea mays HOM05D004672 ORTHO05D005732 7.5e-06 54.3 44 54.5
Cpa.g.sc20.40 Carica papaya HOM05D004672 ORTHO05D005732 9.8e-06 53.9 49 55.1
AUR62030919 Chenopodium quinoa HOM05D004672 ORTHO05D005732 9.8e-06 53.9 68 44.1
FAN15G2368 Fragaria x ananassa HOM05D004672 ORTHO05D005732 9.8e-06 53.9 50 58.0
FAN27G2619 Fragaria x ananassa HOM05D004672 ORTHO05D005732 9.8e-06 53.9 50 58.0
Glyma.15G060100 Glycine max HOM05D004672 ORTHO05D005732 9.8e-06 53.9 51 54.9
Gorai.013G053600 Gossypium raimondii HOM05D004672 ORTHO05D005732 9.8e-06 53.9 47 57.4
THA.LOC104799703 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 9.8e-06 53.9 49 55.1


User provided reference genes

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