Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20674 Utricularia gibba HOM05D004369 ORTHO05D004907 1.2e-108 396.7 225 100.0
MSTRG.6296 Avicennia marina HOM05D004369 ORTHO05D004907 5.9e-28 128.6 232 42.2
MSTRG.19768 Avicennia marina HOM05D004369 ORTHO05D004907 1.4e-26 124.0 238 42.0
Migut.J01607 Erythranthe guttata HOM05D004369 ORTHO05D004907 7.2e-26 121.7 241 40.7
MSTRG.26187 Avicennia marina HOM05D004369 ORTHO05D004907 1.0e-24 117.9 246 39.4
Oeu009515.1 Olea europaea HOM05D004369 ORTHO05D004907 1.4e-24 117.5 240 40.0
Cc00_g08990 Coffea canephora HOM05D004369 ORTHO05D004907 1.5e-23 114.0 256 38.7
Oeu057811.1 Olea europaea HOM05D004369 ORTHO05D004907 4.3e-23 112.5 229 39.3
SalBow6G6868 Salvia bowleyana HOM05D004369 ORTHO05D004907 3.7e-22 109.4 216 40.3
CiPaw.09G052400 Carya illinoinensis HOM05D004369 ORTHO05D004907 8.2e-22 108.2 240 37.1
Nn7g37071 Nelumbo nucifera HOM05D004369 ORTHO05D004907 1.4e-21 107.5 237 35.4
Duzib106G1975 Durio zibethinus HOM05D004369 ORTHO05D004907 1.8e-21 107.1 241 36.5
Atru.chr1.1512 Acer truncatum HOM05D004369 ORTHO05D004907 2.4e-21 106.7 244 35.7
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 3.1e-21 106.3 241 38.2
Thecc.05G119700 Theobroma cacao HOM05D004369 ORTHO05D004907 5.3e-21 105.5 253 41.9
unitig_744.g24165 Utricularia gibba HOM05D004369 ORTHO05D004907 3.4e-20 102.8 87 64.4
Oeu060762.1 Olea europaea HOM05D004369 ORTHO05D004907 4.5e-20 102.4 245 36.7
Duzib128G0931 Durio zibethinus HOM05D004369 ORTHO05D004907 3.8e-19 99.4 244 36.5
PGR142G3989 Punica granatum HOM05D004369 ORTHO05D004907 6.5e-19 98.6 273 33.3
SalBow1G6186 Salvia bowleyana HOM05D004369 ORTHO05D004907 6.5e-19 98.6 241 38.6
MBI13_g13129_MAGBIO Magnolia biondii HOM05D004369 ORTHO05D004907 1.1e-18 97.8 236 33.5
Sabra16G0033500 Salix brachista HOM05D004369 ORTHO05D004907 1.1e-18 97.8 260 35.0
Sc19g0007900 Simmondsia chinensis HOM05D004369 ORTHO05D004907 1.1e-18 97.8 237 35.0
VMungo1383G1978 Vigna mungo HOM05D004369 ORTHO05D004907 1.1e-18 97.8 262 32.4
Dinv06038 Davidia involucrata HOM05D004369 ORTHO05D004907 1.4e-18 97.4 240 34.6
unitig_744.g24166 Utricularia gibba HOM05D004369 ORTHO05D004907 1.4e-18 97.4 116 55.2
Oeu044231.1 Olea europaea HOM05D004369 ORTHO05D004907 1.9e-18 97.1 247 36.8
ClCG10G016480 Citrullus lanatus HOM05D004369 ORTHO05D004907 2.5e-18 96.7 248 35.5
Manes.09G001100 Manihot esculenta HOM05D004369 ORTHO05D004907 2.5e-18 96.7 243 35.4
Potri.016G029600 Populus trichocarpa HOM05D004369 ORTHO05D004907 5.5e-18 95.5 263 34.2
Migut.K00167 Erythranthe guttata HOM05D004369 ORTHO05D004907 7.2e-18 95.1 219 39.3
Gohir.D01G183200 Gossypium hirsutum HOM05D004369 ORTHO05D004907 7.2e-18 95.1 215 42.8
Glyma.03G120700 Glycine max HOM05D004369 ORTHO05D004907 1.2e-17 94.4 254 31.9
Sabra06G0021600 Salix brachista HOM05D004369 ORTHO05D004907 1.2e-17 94.4 263 33.8
Gorai.002G226300 Gossypium raimondii HOM05D004369 ORTHO05D004907 1.6e-17 94.0 216 41.2
Phvul.001G116900 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 1.6e-17 94.0 262 31.7
MSTRG.10776 Avicennia marina HOM05D004369 ORTHO05D004907 2.1e-17 93.6 219 37.0
Peaxi162Scf00607g00054 Petunia axillaris HOM05D004369 ORTHO05D004907 2.1e-17 93.6 246 34.1
PGSC0003DMG400028198 Solanum tuberosum HOM05D004369 ORTHO05D004907 2.1e-17 93.6 244 34.0
MD04G1191900 Malus domestica HOM05D004369 ORTHO05D004907 2.7e-17 93.2 267 34.5
TWI74G0038 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 3.6e-17 92.8 249 32.9
Cpa.g.sc33.191 Carica papaya HOM05D004369 ORTHO05D004907 4.7e-17 92.4 245 33.9
Gohir.A01G192900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 4.7e-17 92.4 216 40.7
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 6.1e-17 92.0 238 34.5
Phvul.002G069001 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 6.1e-17 92.0 232 32.3
PGSC0003DMG400007200 Solanum tuberosum HOM05D004369 ORTHO05D004907 6.1e-17 92.0 237 36.3
Oeu023004.1 Olea europaea HOM05D004369 ORTHO05D004907 7.9e-17 91.7 215 35.8
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 1.0e-16 91.3 247 33.2
Nitab4.5_0000062g0280 Nicotiana tabacum HOM05D004369 ORTHO05D004907 1.4e-16 90.9 253 37.2
Nitab4.5_0000123g0220 Nicotiana tabacum HOM05D004369 ORTHO05D004907 1.8e-16 90.5 242 36.0
DCAR_013523 Daucus carota HOM05D004369 ORTHO05D004907 2.3e-16 90.1 219 34.2
Nitab4.5_0001270g0170 Nicotiana tabacum HOM05D004369 ORTHO05D004907 3.0e-16 89.7 242 36.0
Prupe.6G310500 Prunus persica HOM05D004369 ORTHO05D004907 3.9e-16 89.4 263 33.1
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 5.1e-16 89.0 238 34.0
Solyc10g077130.1 Solanum lycopersicum HOM05D004369 ORTHO05D004907 5.1e-16 89.0 237 35.9
Sopen10g031550 Solanum pennellii HOM05D004369 ORTHO05D004907 5.1e-16 89.0 252 33.3
TWI53G1196 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 1.1e-15 87.8 247 32.8
Lsat_1_v5_gn_8_109221 Lactuca sativa HOM05D004369 ORTHO05D004907 2.6e-15 86.7 250 35.2
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 3.3e-15 86.3 238 33.2
Oeu034749.1 Olea europaea HOM05D004369 ORTHO05D004907 3.3e-15 86.3 250 34.0
Potri.006G032300 Populus trichocarpa HOM05D004369 ORTHO05D004907 3.3e-15 86.3 267 33.7
SGA_v2.0_scaffold106G30551 Striga asiatica HOM05D004369 ORTHO05D004907 3.3e-15 86.3 210 37.6
EL10Ac3g07333 Beta vulgaris HOM05D004369 ORTHO05D004907 4.4e-15 85.9 247 32.8
Lalb_Chr22g0357981 Lupinus albus HOM05D004369 ORTHO05D004907 4.4e-15 85.9 251 32.7
PGR042G0777 Punica granatum HOM05D004369 ORTHO05D004907 4.4e-15 85.9 239 32.2
Sopen10g028810 Solanum pennellii HOM05D004369 ORTHO05D004907 4.4e-15 85.9 237 35.0
Actinidia37863 Actinidia chinensis HOM05D004369 ORTHO05D004907 5.7e-15 85.5 149 43.6
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 7.4e-15 85.1 264 33.0
Lalb_Chr14g0365411 Lupinus albus HOM05D004369 ORTHO05D004907 1.3e-14 84.3 252 31.3
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 1.3e-14 84.3 256 34.8
Oeu034750.1 Olea europaea HOM05D004369 ORTHO05D004907 2.8e-14 83.2 248 33.9
FvH4_6g07790 Fragaria vesca HOM05D004369 ORTHO05D004907 1.4e-13 80.9 265 32.5
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 1.8e-13 80.5 266 32.3
MELO3C009728.2 Cucumis melo HOM05D004369 ORTHO05D004907 2.4e-13 80.1 250 32.8
FAN09G2868 Fragaria x ananassa HOM05D004369 ORTHO05D004907 3.1e-13 79.7 264 31.8
CANSAT80G1482 Cannabis sativa HOM05D004369 ORTHO05D004907 4.1e-13 79.3 131 39.7
Glyma.19G125300 Glycine max HOM05D004369 ORTHO05D004907 4.1e-13 79.3 251 28.7
CAN.G959.22 Capsicum annuum HOM05D004369 ORTHO05D004907 5.3e-13 79.0 149 40.3
Ah.13g077330 Amaranthus hybridus HOM05D004369 ORTHO05D004907 7.0e-13 78.6 210 31.4
CsaV3_3G039860 Cucumis sativus L. HOM05D004369 ORTHO05D004907 1.2e-12 77.8 258 32.2
HanXRQChr09g0258571 Helianthus annuus HOM05D004369 ORTHO05D004907 1.2e-12 77.8 231 33.8
Ciclev10012618m.g Citrus clementina HOM05D004369 ORTHO05D004907 1.6e-12 77.4 249 30.9
Gohir.D11G321000 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.6e-12 77.4 138 37.7
Lj1g0025044 Lotus japonicus HOM05D004369 ORTHO05D004907 1.6e-12 77.4 235 31.1
Eucgr.K01686 Eucalyptus grandis HOM05D004369 ORTHO05D004907 2.0e-12 77.0 288 31.2
Gorai.007G351200 Gossypium raimondii HOM05D004369 ORTHO05D004907 2.0e-12 77.0 132 38.6
TPR.G22743 Trifolium pratense HOM05D004369 ORTHO05D004907 2.6e-12 76.6 168 35.7
Gohir.A11G305500 Gossypium hirsutum HOM05D004369 ORTHO05D004907 3.5e-12 76.3 123 43.9
SGA_v2.0_scaffold66G22309 Striga asiatica HOM05D004369 ORTHO05D004907 3.5e-12 76.3 254 31.5
QL07p014155 Quercus lobata HOM05D004369 ORTHO05D004907 4.5e-12 75.9 174 35.6
Gohir.D11G320900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 5.9e-12 75.5 119 42.0
Gorai.007G351100 Gossypium raimondii HOM05D004369 ORTHO05D004907 5.9e-12 75.5 119 42.0
Psat0ss9348g0120 Pisum sativum HOM05D004369 ORTHO05D004907 5.9e-12 75.5 266 29.3
BolC8t50831H Brassica oleracea HOM05D004369 ORTHO05D004907 1.0e-11 74.7 253 32.4
AUR62021003 Chenopodium quinoa HOM05D004369 ORTHO05D004907 1.3e-11 74.3 241 34.0
RcHm_v2.0_Chr3g0457501 Rosa chinensis HOM05D004369 ORTHO05D004907 1.3e-11 74.3 193 35.2
Ah.04g150390 Amaranthus hybridus HOM05D004369 ORTHO05D004907 1.7e-11 73.9 158 35.4
Gohir.A11G305600 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.7e-11 73.9 121 43.0
Medtr7g088620 Medicago truncatula HOM05D004369 ORTHO05D004907 1.7e-11 73.9 254 34.6
AUR62018430 Chenopodium quinoa HOM05D004369 ORTHO05D004907 2.2e-11 73.6 142 39.4
Sp5g05710 Schrenkiella parvula HOM05D004369 ORTHO05D004907 2.2e-11 73.6 256 30.5
BcaC07g40000 Brassica carinata HOM05D004369 ORTHO05D004907 3.8e-11 72.8 254 31.9
C08p32120 Brassica napus HOM05D004369 ORTHO05D004907 3.8e-11 72.8 254 31.9
Thhalv10006505m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 3.8e-11 72.8 250 30.4
ATR1096G063 Amborella trichopoda HOM05D004369 ORTHO05D004907 5.0e-11 72.4 219 30.6
DCAR_020610 Daucus carota HOM05D004369 ORTHO05D004907 5.0e-11 72.4 143 37.8
Sc25g0005580 Simmondsia chinensis HOM05D004369 ORTHO05D004907 6.5e-11 72.0 123 39.8
A09p49750 Brassica napus HOM05D004369 ORTHO05D004907 8.5e-11 71.6 256 29.7
BraA09t40428Z Brassica rapa HOM05D004369 ORTHO05D004907 8.5e-11 71.6 256 29.7
CiPaw.10G044100 Carya illinoinensis HOM05D004369 ORTHO05D004907 8.5e-11 71.6 190 34.7
BcaC02g09876 Brassica carinata HOM05D004369 ORTHO05D004907 1.9e-10 70.5 252 30.2
C04p35650 Brassica napus HOM05D004369 ORTHO05D004907 1.9e-10 70.5 252 30.2
BolC4t25239H Brassica oleracea HOM05D004369 ORTHO05D004907 1.9e-10 70.5 252 30.2
Ca_08356_v3 Cicer arietinum L. HOM05D004369 ORTHO05D004907 1.9e-10 70.5 251 29.9
THA.LOC104824387 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 1.9e-10 70.5 248 27.4
ECA236G2438 Erigeron canadensis HOM05D004369 ORTHO05D004907 3.2e-10 69.7 132 38.6
BcaC07g40111 Brassica carinata HOM05D004369 ORTHO05D004907 7.2e-10 68.6 246 29.3
Aa31LG10G11730 Aethionema arabicum HOM05D004369 ORTHO05D004907 1.2e-09 67.8 168 37.5
Carub.0005s2361 Capsella rubella HOM05D004369 ORTHO05D004907 1.6e-09 67.4 264 28.0
Aqoxy2G00033 Aquilegia oxysepala HOM05D004369 ORTHO05D004907 2.1e-09 67.0 263 30.0
CiPaw.12G092400 Carya illinoinensis HOM05D004369 ORTHO05D004907 2.1e-09 67.0 167 35.3
Sed0018866 Sechium edule HOM05D004369 ORTHO05D004907 2.1e-09 67.0 135 37.8
A04p03590 Brassica napus HOM05D004369 ORTHO05D004907 2.7e-09 66.6 249 29.7
SGA_v2.0_scaffold69G23192 Striga asiatica HOM05D004369 ORTHO05D004907 2.7e-09 66.6 242 31.0
THA.LOC104803243 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 3.6e-09 66.2 219 30.1
BraA04t16076Z Brassica rapa HOM05D004369 ORTHO05D004907 4.7e-09 65.9 249 29.3
AL4G38990 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 6.1e-09 65.5 158 31.6
AT3G56880 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 6.1e-09 65.5 165 33.3
CDE09G1065 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 6.1e-09 65.5 144 38.2
C04p68730 Brassica napus HOM05D004369 ORTHO05D004907 1.0e-08 64.7 228 28.9
BolC4t28378H Brassica oleracea HOM05D004369 ORTHO05D004907 1.0e-08 64.7 228 28.9
HPP92_012446 Vanilla planifolia HOM05D004369 ORTHO05D004907 1.0e-08 64.7 218 28.9
BraA04t18590Z Brassica rapa HOM05D004369 ORTHO05D004907 1.4e-08 64.3 231 30.3
Peaxi162Scf00003g05315 Petunia axillaris HOM05D004369 ORTHO05D004907 1.4e-08 64.3 158 34.2
BcaB02g08344 Brassica carinata HOM05D004369 ORTHO05D004907 1.8e-08 63.9 249 28.5
Carub.0004s2334 Capsella rubella HOM05D004369 ORTHO05D004907 2.3e-08 63.5 142 34.5
Os01g0278000 Oryza sativa ssp. japonica HOM05D004369 ORTHO05D004907 2.3e-08 63.5 86 47.7
AL5G38270 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 4.0e-08 62.8 154 34.4
AT2G41010 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 4.0e-08 62.8 162 30.9
BcaC02g12874 Brassica carinata HOM05D004369 ORTHO05D004907 4.0e-08 62.8 233 28.8
CARHR136130 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.0e-08 62.8 230 27.4
HPP92_014347 Vanilla planifolia HOM05D004369 ORTHO05D004907 5.2e-08 62.4 170 30.0
Thhalv10017173m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 2.0e-07 60.5 136 32.4
A04p31330 Brassica napus HOM05D004369 ORTHO05D004907 2.6e-07 60.1 154 35.1
Sp4g23330 Schrenkiella parvula HOM05D004369 ORTHO05D004907 2.6e-07 60.1 236 26.7
CAN.G128.96 Capsicum annuum HOM05D004369 ORTHO05D004907 4.4e-07 59.3 79 48.1
CARHR167030 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.4e-07 59.3 267 28.5
HanXRQChr03g0086901 Helianthus annuus HOM05D004369 ORTHO05D004907 7.5e-07 58.5 241 33.6
SHI12275 Sapria himalayana HOM05D004369 ORTHO05D004907 2.2e-06 57.0 36 75.0
THA.LOC104815333 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 3.7e-06 56.2 244 26.6
HPP92_028709 Vanilla planifolia HOM05D004369 ORTHO05D004907 6.3e-06 55.5 55 52.7


User provided reference genes

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