Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 1.6e-136 489.6 267 100.0
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 1.3e-18 97.8 149 51.0
unitig_744.g24164 Utricularia gibba HOM05D003084 ORTHO05D003580 4.2e-17 92.8 92 64.1
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.0e-15 88.2 131 46.6
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 1.4e-15 87.8 153 47.1
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 3.0e-15 86.7 95 52.6
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 8.8e-15 85.1 150 47.3
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 8.8e-15 85.1 180 43.3
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 1.5e-14 84.3 142 45.1
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 3.4e-14 83.2 147 46.9
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 9.8e-14 81.6 92 52.2
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 2.8e-13 80.1 150 42.0
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 3.7e-13 79.7 155 45.8
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.1e-12 78.2 90 55.6
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 7.0e-12 75.5 90 55.6
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 1.2e-11 74.7 158 44.3
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 2.0e-11 73.9 153 43.1
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 2.7e-11 73.6 101 52.5
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 3.5e-11 73.2 148 42.6
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 4.5e-11 72.8 91 53.8
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 4.5e-11 72.8 144 44.4
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 5.9e-11 72.4 95 60.0
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 1.0e-10 71.6 150 40.0
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 2.2e-10 70.5 153 45.8
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 2.2e-10 70.5 148 48.0
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 2.9e-10 70.1 102 52.9
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 3.8e-10 69.7 150 48.0
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 3.8e-10 69.7 90 55.6
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 6.5e-10 68.9 102 44.1
Actinidia05489 Actinidia chinensis HOM05D005060 ORTHO05D005975 8.5e-10 68.6 45 77.8
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.5e-09 67.8 112 51.8
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.9e-09 67.4 150 39.3
arahy.Tifrunner.gnm1.ann1.U3TF2Z Arachis hypogaea HOM05D005060 ORTHO05D005975 2.5e-09 67.0 61 67.2
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 4.2e-09 66.2 157 45.9
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 4.2e-09 66.2 148 41.9
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 5.5e-09 65.9 143 48.3
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 7.2e-09 65.5 76 52.6
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 9.4e-09 65.1 150 46.0
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 9.4e-09 65.1 150 46.0
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 9.4e-09 65.1 90 56.7
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 1.6e-08 64.3 152 42.8
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 2.1e-08 63.9 148 39.9
Glyma.03G120300 Glycine max HOM05D005060 ORTHO05D005975 2.1e-08 63.9 66 65.2
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 2.1e-08 63.9 152 37.5
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 2.7e-08 63.5 91 53.8
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 2.7e-08 63.5 152 37.5
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 2.7e-08 63.5 90 53.3
A07p23120 Brassica napus HOM05D005060 ORTHO05D005975 3.6e-08 63.2 162 45.1
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 3.6e-08 63.2 150 40.0
CARHR167060 Cardamine hirsuta HOM05D005060 ORTHO05D005975 6.1e-08 62.4 143 45.5
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 6.1e-08 62.4 181 41.4
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 8.0e-08 62.0 141 36.9
BcaC02g09878 Brassica carinata HOM05D005060 ORTHO05D005975 1.4e-07 61.2 146 44.5
C04p35630 Brassica napus HOM05D005060 ORTHO05D005975 1.4e-07 61.2 146 44.5
BolC4t25241H Brassica oleracea HOM05D005060 ORTHO05D005975 1.4e-07 61.2 146 44.5
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.8e-07 60.8 147 40.8
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 1.8e-07 60.8 150 36.0
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 2.3e-07 60.5 113 44.2
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 3.0e-07 60.1 143 44.1
BcaC07g40003 Brassica carinata HOM05D005060 ORTHO05D005975 4.0e-07 59.7 148 45.3
C08p32160 Brassica napus HOM05D005060 ORTHO05D005975 4.0e-07 59.7 148 45.3
BolC8t50834H Brassica oleracea HOM05D005060 ORTHO05D005975 4.0e-07 59.7 148 45.3
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 6.8e-07 58.9 146 39.0
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 6.8e-07 58.9 141 42.6
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 8.8e-07 58.5 145 42.8
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 1.2e-06 58.2 143 42.0
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.2e-06 58.2 89 51.7
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 1.2e-06 58.2 143 44.1
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 1.5e-06 57.8 148 43.2
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 1.5e-06 57.8 148 43.2
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 1.5e-06 57.8 65 61.5
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.5e-06 57.8 65 61.5
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 1.5e-06 57.8 65 61.5
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 1.5e-06 57.8 149 37.6
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 1.5e-06 57.8 146 40.4
arahy.Tifrunner.gnm1.ann1.3R5KQS Arachis hypogaea HOM05D005060 ORTHO05D005975 2.0e-06 57.4 145 42.1
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 2.0e-06 57.4 91 49.5
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 2.0e-06 57.4 132 42.4
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 2.6e-06 57.0 136 44.9
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 7.5e-06 55.5 75 54.7
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 7.5e-06 55.5 92 47.8
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 9.8e-06 55.1 91 49.5


User provided reference genes

Program Settings