Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 2.6e-109 398.7 191 100.0
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 7.2e-43 177.9 225 46.2
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.7e-41 171.4 165 53.9
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.7e-41 171.4 165 53.9
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 5.7e-40 168.3 228 44.3
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.0e-36 157.5 172 49.4
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 4.2e-35 152.1 194 40.7
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 7.2e-35 151.4 183 45.9
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 7.2e-35 151.4 165 45.5
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 9.4e-35 151.0 165 45.5
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.6e-34 150.2 227 40.5
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.6e-34 150.2 165 44.8
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 2.1e-34 149.8 165 48.5
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.4e-33 147.1 209 40.2
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 1.4e-33 147.1 210 40.5
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.8e-33 146.7 229 40.6
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.3e-33 146.4 204 42.2
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 3.0e-33 146.0 163 44.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 8.8e-33 144.4 219 41.1
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 2.0e-32 143.3 216 40.3
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 2.0e-32 143.3 193 42.0
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.0e-32 143.3 176 44.9
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 5.7e-32 141.7 194 40.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 7.4e-32 141.4 148 48.0
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 9.7e-32 141.0 227 37.9
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 9.7e-32 141.0 196 39.8
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.7e-31 140.2 216 39.4
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 2.2e-31 139.8 213 41.8
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.2e-31 139.8 162 43.2
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 2.2e-31 139.8 158 48.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 2.8e-31 139.4 171 46.8
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 4.8e-31 138.7 146 49.3
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.4e-30 137.1 209 40.2
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.8e-30 136.7 167 44.3
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 1.8e-30 136.7 217 39.2
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.8e-30 136.7 205 41.0
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.8e-30 136.7 226 37.2
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.8e-30 136.7 180 43.3
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.3e-30 135.2 205 40.5
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.3e-30 135.2 205 41.0
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 5.3e-30 135.2 190 42.1
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 6.9e-30 134.8 148 45.3
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 9.1e-30 134.4 216 38.4
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.2e-29 134.0 211 39.8
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.5e-29 133.7 175 44.0
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 1.5e-29 133.7 161 43.5
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 3.4e-29 132.5 170 40.6
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 5.9e-29 131.7 150 48.0
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 5.9e-29 131.7 230 39.6
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 7.7e-29 131.3 163 44.8
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.3e-28 130.6 161 46.6
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.3e-28 130.6 216 36.6
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 2.2e-28 129.8 184 38.6
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.2e-28 129.8 172 45.9
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 3.8e-28 129.0 160 41.9
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.8e-28 129.0 162 42.0
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 6.5e-28 128.3 164 40.2
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.9e-27 126.7 213 38.5
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 2.7e-26 122.9 151 42.4
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 3.6e-26 122.5 160 42.5
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 3.6e-26 122.5 198 39.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 3.6e-26 122.5 202 36.6
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 6.1e-26 121.7 203 37.9
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 7.9e-26 121.3 209 36.8
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.0e-25 120.9 200 37.0
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.4e-25 120.6 196 38.8
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 1.4e-25 120.6 163 39.3
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.8e-25 120.2 168 41.1
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 3.9e-25 119.0 206 37.4
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 2.2e-23 113.2 148 39.9
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 2.8e-23 112.8 148 40.5
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 6.3e-23 111.7 163 38.0
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 6.3e-23 111.7 204 34.8
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 8.2e-23 111.3 210 36.7
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 1.8e-22 110.2 60 78.3
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.4e-22 109.8 156 41.0
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.4e-22 109.8 162 38.3
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 3.1e-22 109.4 167 36.5
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.1e-22 109.4 159 40.3
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 9.1e-22 107.8 180 37.2
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 2.2e-20 103.2 178 36.5
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.9e-20 102.8 173 33.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.1e-19 100.9 191 37.7
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.1e-19 100.9 75 61.3
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 4.2e-19 99.0 144 38.9
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.2e-18 97.4 52 80.8
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.0e-17 94.4 53 73.6
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 8.8e-17 91.3 85 52.9
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 2.6e-16 89.7 173 34.1
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 4.4e-16 89.0 146 34.2
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.7e-15 85.9 67 59.7
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 4.8e-15 85.5 130 36.9
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 2.2e-07 60.1 57 45.6
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.8e-07 59.7 43 60.5


User provided reference genes

Program Settings