Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 1.4e-57 226.1 113 100.0
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 2.3e-25 119.0 96 65.6
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 2.6e-24 115.5 107 61.7
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 7.8e-21 104.0 113 54.9
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 1.7e-20 102.8 112 52.7
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 8.6e-20 100.5 92 62.0
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 8.6e-20 100.5 99 56.6
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 2.5e-19 99.0 101 55.4
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 4.3e-19 98.2 100 59.0
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 5.6e-19 97.8 111 49.5
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 1.2e-18 96.7 96 55.2
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.2e-18 96.7 92 58.7
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 6.2e-18 94.4 103 53.4
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 1.8e-17 92.8 86 60.5
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 1.8e-17 92.8 100 52.0
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 1.8e-17 92.8 100 52.0
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 3.1e-17 92.0 120 48.3
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 6.8e-17 90.9 101 53.5
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 8.9e-17 90.5 101 53.5
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 8.9e-17 90.5 65 70.8
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 1.2e-16 90.1 107 53.3
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 1.2e-16 90.1 100 50.0
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 1.2e-16 90.1 110 49.1
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 1.5e-16 89.7 103 51.5
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.5e-16 89.7 114 46.5
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 2.0e-16 89.4 99 53.5
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 2.6e-16 89.0 93 52.7
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 2.6e-16 89.0 106 50.0
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 2.6e-16 89.0 87 56.3
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 2.6e-16 89.0 99 53.5
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 2.6e-16 89.0 109 54.1
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 2.6e-16 89.0 99 49.5
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 3.4e-16 88.6 97 49.5
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 4.4e-16 88.2 103 47.6
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 5.8e-16 87.8 86 58.1
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 7.5e-16 87.4 83 60.2
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 7.5e-16 87.4 103 47.6
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 9.8e-16 87.0 109 49.5
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 9.8e-16 87.0 60 73.3
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 9.8e-16 87.0 99 52.5
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.3e-15 86.7 86 55.8
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 1.7e-15 86.3 87 52.9
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 1.7e-15 86.3 87 52.9
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 1.7e-15 86.3 87 52.9
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 1.7e-15 86.3 107 51.4
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 2.2e-15 85.9 87 57.5
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 2.2e-15 85.9 65 64.6
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 2.2e-15 85.9 122 45.9
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 2.2e-15 85.9 109 48.6
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 2.9e-15 85.5 104 50.0
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 2.9e-15 85.5 69 65.2
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 2.9e-15 85.5 52 76.9
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 2.9e-15 85.5 103 46.6
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 2.9e-15 85.5 110 42.7
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 3.7e-15 85.1 86 55.8
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 3.7e-15 85.1 55 72.7
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 3.7e-15 85.1 91 50.5
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 4.9e-15 84.7 86 55.8
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 6.4e-15 84.3 86 54.7
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 6.4e-15 84.3 86 54.7
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 6.4e-15 84.3 73 57.5
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 8.3e-15 84.0 105 49.5
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 8.3e-15 84.0 60 73.3
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 8.3e-15 84.0 89 52.8
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 1.1e-14 83.6 104 49.0
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 1.4e-14 83.2 89 52.8
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.9e-14 82.8 87 51.7
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 1.9e-14 82.8 98 49.0
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 1.9e-14 82.8 52 76.9
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 2.4e-14 82.4 86 53.5
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 2.4e-14 82.4 104 49.0
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 2.4e-14 82.4 103 48.5
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 2.4e-14 82.4 104 49.0
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 4.1e-14 81.6 85 55.3
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 4.1e-14 81.6 52 76.9
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 4.1e-14 81.6 66 60.6
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 4.1e-14 81.6 66 60.6
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 5.4e-14 81.3 106 46.2
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 5.4e-14 81.3 101 47.5
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 5.4e-14 81.3 91 49.5
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 7.0e-14 80.9 71 59.2
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 7.0e-14 80.9 64 62.5
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 9.2e-14 80.5 65 61.5
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 9.2e-14 80.5 82 54.9
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.6e-13 79.7 66 59.1
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 2.0e-13 79.3 94 50.0
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.0e-13 79.3 57 70.2
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 2.7e-13 79.0 86 51.2
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 2.7e-13 79.0 94 52.1
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 3.5e-13 78.6 104 45.2
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 4.6e-13 78.2 85 48.2
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 6.0e-13 77.8 47 76.6
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 7.8e-13 77.4 117 46.2
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 2.3e-12 75.9 57 63.2
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 1.1e-11 73.6 53 62.3
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 2.5e-11 72.4 91 50.5
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 3.3e-11 72.0 39 82.1
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 4.3e-11 71.6 70 57.1
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 5.6e-11 71.2 99 44.4
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 7.3e-11 70.9 99 43.4
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 4.7e-10 68.2 87 47.1
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 4.7e-10 68.2 87 47.1
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 8.1e-10 67.4 43 74.4
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 6.8e-09 64.3 87 46.0
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 6.8e-09 64.3 57 56.1
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.2e-08 63.5 59 55.9
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 1.2e-08 63.5 48 58.3
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 4.4e-08 61.6 49 61.2
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 5.8e-08 61.2 81 43.2
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 1.3e-07 60.1 100 42.0


User provided reference genes

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