Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20608 Utricularia gibba HOM05D003422 ORTHO05D004263 1.8e-130 469.5 283 100.0
Oeu041425.1 Olea europaea HOM05D003422 ORTHO05D004263 1.7e-96 356.7 294 68.4
Cfa012129 Carpinus fangiana HOM05D003422 ORTHO05D004263 2.9e-93 345.9 294 71.1
Nn8g39875 Nelumbo nucifera HOM05D003422 ORTHO05D004263 1.1e-92 344.0 291 66.3
Haze_12250 Corylus avellana HOM05D003422 ORTHO05D004263 1.5e-92 343.6 299 70.6
Haze_08919 Corylus avellana HOM05D003422 ORTHO05D004263 4.2e-92 342.0 294 70.4
Cfa009213 Carpinus fangiana HOM05D003422 ORTHO05D004263 1.6e-91 340.1 299 69.9
Dinv15231 Davidia involucrata HOM05D003422 ORTHO05D004263 1.6e-91 340.1 308 63.3
CiPaw.05G181800 Carya illinoinensis HOM05D003422 ORTHO05D004263 2.8e-91 339.3 302 66.6
Hma1.2p1_3343F.1_g335440 Hydrangea macrophylla HOM05D003422 ORTHO05D004263 3.6e-91 339.0 299 63.2
Sc14g0008740 Simmondsia chinensis HOM05D003422 ORTHO05D004263 4.7e-91 338.6 298 63.1
CSS0036067 Camellia sinensis var. sinensis HOM05D003422 ORTHO05D004263 6.1e-91 338.2 297 62.0
TWI23G0208 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 8.0e-91 337.8 293 66.2
Ciclev10032237m.g Citrus clementina HOM05D003422 ORTHO05D004263 1.8e-90 336.7 300 63.3
Prupe.1G244800 Prunus persica HOM05D003422 ORTHO05D004263 2.3e-90 336.3 300 64.0
Atru.chr2.1587 Acer truncatum HOM05D003422 ORTHO05D004263 3.0e-90 335.9 300 62.3
CiPaw.05G159400 Carya illinoinensis HOM05D003422 ORTHO05D004263 3.0e-90 335.9 300 66.0
GSVIVG01021879001 Vitis vinifera HOM05D003422 ORTHO05D004263 6.8e-90 334.7 294 63.9
Sed0026406 Sechium edule HOM05D003422 ORTHO05D004263 8.9e-90 334.3 212 78.3
TWI39G0719 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 8.9e-90 334.3 291 66.3
QL03p058012 Quercus lobata HOM05D003422 ORTHO05D004263 1.2e-89 334.0 214 81.3
TAR622G0502 Trochodendron aralioides HOM05D003422 ORTHO05D004263 1.2e-89 334.0 295 63.1
GSVIVG01007655001 Vitis vinifera HOM05D003422 ORTHO05D004263 2.0e-89 333.2 295 64.1
Atru.chr3.1581 Acer truncatum HOM05D003422 ORTHO05D004263 2.6e-89 332.8 214 77.1
Manes.13G024200 Manihot esculenta HOM05D003422 ORTHO05D004263 2.6e-89 332.8 298 65.4
QL03p061510 Quercus lobata HOM05D003422 ORTHO05D004263 1.3e-88 330.5 297 65.0
Cc11_g15770 Coffea canephora HOM05D003422 ORTHO05D004263 2.2e-88 329.7 294 65.6
CANSAT64G0467 Cannabis sativa HOM05D003422 ORTHO05D004263 6.3e-88 328.2 215 78.1
Nn2g13933 Nelumbo nucifera HOM05D003422 ORTHO05D004263 6.3e-88 328.2 217 81.1
Hund06028 Selenicereus undatus HOM05D003422 ORTHO05D004263 1.4e-87 327.0 292 64.0
Nn8g40815 Nelumbo nucifera HOM05D003422 ORTHO05D004263 2.4e-87 326.2 290 66.2
Cpa.g.sc33.23 Carica papaya HOM05D003422 ORTHO05D004263 1.2e-86 323.9 210 78.6
Peaxi162Scf00128g00219 Petunia axillaris HOM05D003422 ORTHO05D004263 2.0e-86 323.2 214 75.7
Sed0010066 Sechium edule HOM05D003422 ORTHO05D004263 2.0e-86 323.2 208 76.9
PGSC0003DMG400032131 Solanum tuberosum HOM05D003422 ORTHO05D004263 2.7e-86 322.8 214 75.7
Solyc01g005810.3 Solanum lycopersicum HOM05D003422 ORTHO05D004263 5.9e-86 321.6 214 75.7
Sopen01g001810 Solanum pennellii HOM05D003422 ORTHO05D004263 5.9e-86 321.6 214 75.7
Dinv38208 Davidia involucrata HOM05D003422 ORTHO05D004263 7.8e-86 321.2 209 78.5
MD03G1198200 Malus domestica HOM05D003422 ORTHO05D004263 1.0e-85 320.9 296 60.1
Phvul.011G000100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 1.7e-85 320.1 295 66.1
Nitab4.5_0001565g0060 Nicotiana tabacum HOM05D003422 ORTHO05D004263 2.3e-85 319.7 305 59.0
Nitab4.5_0009109g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 2.3e-85 319.7 304 59.2
Nitab4.5_0016963g0010 Nicotiana tabacum HOM05D003422 ORTHO05D004263 2.3e-85 319.7 303 59.4
Eucgr.B00992 Eucalyptus grandis HOM05D003422 ORTHO05D004263 2.9e-85 319.3 300 67.7
Glyma.12G119800 Glycine max HOM05D003422 ORTHO05D004263 2.9e-85 319.3 300 67.7
Phvul.010G035100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 3.8e-85 318.9 295 66.4
Glyma.06G286100 Glycine max HOM05D003422 ORTHO05D004263 5.0e-85 318.5 300 67.0
Prupe.8G016700 Prunus persica HOM05D003422 ORTHO05D004263 5.0e-85 318.5 288 62.5
arahy.Tifrunner.gnm1.ann1.G4VR7T Arachis hypogaea HOM05D003422 ORTHO05D004263 1.1e-84 317.4 297 61.3
ClCG07G015410 Citrullus lanatus HOM05D003422 ORTHO05D004263 1.1e-84 317.4 200 78.0
FAN07G0682 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.1e-84 317.4 289 64.7
MELO3C017744.2 Cucumis melo HOM05D003422 ORTHO05D004263 1.5e-84 317.0 200 77.5
RcHm_v2.0_Chr4g0433011 Rosa chinensis HOM05D003422 ORTHO05D004263 1.5e-84 317.0 295 60.0
Eucgr.K01009 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.9e-84 316.6 304 66.8
PGR102G0689 Punica granatum HOM05D003422 ORTHO05D004263 1.9e-84 316.6 201 77.1
CsaV3_4G003000 Cucumis sativus L. HOM05D003422 ORTHO05D004263 3.3e-84 315.8 200 77.0
RcHm_v2.0_Chr7g0190541 Rosa chinensis HOM05D003422 ORTHO05D004263 3.3e-84 315.8 294 59.2
Aqoxy5G03760 Aquilegia oxysepala HOM05D003422 ORTHO05D004263 4.3e-84 315.5 292 63.0
MD11G1214400 Malus domestica HOM05D003422 ORTHO05D004263 9.5e-84 314.3 296 59.5
Actinidia15098 Actinidia chinensis HOM05D003422 ORTHO05D004263 2.1e-83 313.2 301 62.8
Migut.E00204 Erythranthe guttata HOM05D003422 ORTHO05D004263 2.8e-83 312.8 200 77.0
FvH4_4g25580 Fragaria vesca HOM05D003422 ORTHO05D004263 3.6e-83 312.4 296 66.9
TAR374G1409 Trochodendron aralioides HOM05D003422 ORTHO05D004263 1.0e-82 310.8 301 60.8
arahy.Tifrunner.gnm1.ann1.I3QT17 Arachis hypogaea HOM05D003422 ORTHO05D004263 1.8e-82 310.1 297 61.3
FAN22G1899 Fragaria x ananassa HOM05D003422 ORTHO05D004263 3.0e-82 309.3 294 62.9
Lalb_Chr10g0099861 Lupinus albus HOM05D003422 ORTHO05D004263 3.0e-82 309.3 203 83.3
FAN17G2514 Fragaria x ananassa HOM05D003422 ORTHO05D004263 4.0e-82 308.9 294 64.3
HPP92_014432 Vanilla planifolia HOM05D003422 ORTHO05D004263 6.8e-82 308.1 215 75.3
CAN.G158.25 Capsicum annuum HOM05D003422 ORTHO05D004263 3.4e-81 305.8 192 77.1
Potri.012G085300 Populus trichocarpa HOM05D003422 ORTHO05D004263 3.4e-81 305.8 298 63.1
THA.LOC104822989 Tarenaya hassleriana HOM05D003422 ORTHO05D004263 9.8e-81 304.3 202 77.7
Lalb_Chr04g0254851 Lupinus albus HOM05D003422 ORTHO05D004263 2.9e-80 302.8 298 66.8
Sabra15G0107000 Salix brachista HOM05D003422 ORTHO05D004263 3.7e-80 302.4 300 62.7
Potri.015G083700 Populus trichocarpa HOM05D003422 ORTHO05D004263 1.1e-79 300.8 294 62.6
TPR.G28314 Trifolium pratense HOM05D003422 ORTHO05D004263 3.2e-79 299.3 298 56.0
BcaB05g24600 Brassica carinata HOM05D003422 ORTHO05D004263 4.1e-79 298.9 204 73.5
BcaC08g45809 Brassica carinata HOM05D003422 ORTHO05D004263 1.6e-78 297.0 202 72.8
A07p31020 Brassica napus HOM05D003422 ORTHO05D004263 1.6e-78 297.0 202 72.8
C06p36020 Brassica napus HOM05D003422 ORTHO05D004263 1.6e-78 297.0 202 72.8
BolC6t38723H Brassica oleracea HOM05D003422 ORTHO05D004263 1.6e-78 297.0 202 72.8
BcaC03g15214 Brassica carinata HOM05D003422 ORTHO05D004263 2.7e-78 296.2 202 73.3
C02p28010 Brassica napus HOM05D003422 ORTHO05D004263 2.7e-78 296.2 202 73.3
BolC2t08844H Brassica oleracea HOM05D003422 ORTHO05D004263 2.7e-78 296.2 202 73.3
BcaB03g15550 Brassica carinata HOM05D003422 ORTHO05D004263 4.6e-78 295.4 202 72.3
BraA02t06729Z Brassica rapa HOM05D003422 ORTHO05D004263 4.6e-78 295.4 204 72.1
FAN06G1621 Fragaria x ananassa HOM05D003422 ORTHO05D004263 4.6e-78 295.4 201 72.1
Sp5g25830 Schrenkiella parvula HOM05D003422 ORTHO05D004263 4.6e-78 295.4 296 61.1
A02p16750 Brassica napus HOM05D003422 ORTHO05D004263 7.8e-78 294.7 204 73.0
Psat7g167080 Pisum sativum HOM05D003422 ORTHO05D004263 1.0e-77 294.3 302 57.0
SEGI_07600 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 1.0e-77 294.3 308 53.6
DCAR_026512 Daucus carota HOM05D003422 ORTHO05D004263 1.7e-77 293.5 300 58.0
HanXRQChr06g0172831 Helianthus annuus HOM05D003422 ORTHO05D004263 1.7e-77 293.5 296 58.8
Carub.0001s2287 Capsella rubella HOM05D003422 ORTHO05D004263 3.9e-77 292.4 296 60.8
CARHR023720 Cardamine hirsuta HOM05D003422 ORTHO05D004263 6.6e-77 291.6 193 72.0
Aa31LG7G7310 Aethionema arabicum HOM05D003422 ORTHO05D004263 8.6e-77 291.2 300 62.7
Rhsim02G0001300 Rhododendron simsii HOM05D003422 ORTHO05D004263 8.6e-77 291.2 241 64.3
AT1G23280 Arabidopsis thaliana HOM05D003422 ORTHO05D004263 1.9e-76 290.0 215 69.8
Duzib068G0444 Durio zibethinus HOM05D003422 ORTHO05D004263 1.9e-76 290.0 295 63.4
VMungo1127G0899 Vigna mungo HOM05D003422 ORTHO05D004263 1.9e-76 290.0 297 60.9
Ca_20120_v3 Cicer arietinum L. HOM05D003422 ORTHO05D004263 2.5e-76 289.7 204 79.9
Thhalv10008312m.g Eutrema salsugineum HOM05D003422 ORTHO05D004263 2.5e-76 289.7 298 56.4
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 3.3e-76 289.3 192 84.9
Lsat_1_v5_gn_8_152261 Lactuca sativa HOM05D003422 ORTHO05D004263 1.6e-75 287.0 213 69.5
ATR0824G091 Amborella trichopoda HOM05D003422 ORTHO05D004263 6.2e-75 285.0 204 71.6
PSO017G4826 Papaver somniferum HOM05D003422 ORTHO05D004263 6.2e-75 285.0 219 64.8
COL.COLO4_05559 Corchorus olitorius HOM05D003422 ORTHO05D004263 1.4e-74 283.9 292 64.0
Sabra12G0061400 Salix brachista HOM05D003422 ORTHO05D004263 1.4e-74 283.9 248 68.5
PSO017G5618 Papaver somniferum HOM05D003422 ORTHO05D004263 1.8e-74 283.5 294 53.7
Rhsim12G0110100 Rhododendron simsii HOM05D003422 ORTHO05D004263 1.8e-74 283.5 325 52.6
Eucgr.K00985 Eucalyptus grandis HOM05D003422 ORTHO05D004263 4.0e-74 282.3 191 78.5
Zm00001eb364260 Zea mays HOM05D003422 ORTHO05D004263 4.0e-74 282.3 209 67.0
PSO478G1628 Papaver somniferum HOM05D003422 ORTHO05D004263 5.2e-74 282.0 204 66.7
Atru.chr3.1559 Acer truncatum HOM05D003422 ORTHO05D004263 6.8e-74 281.6 277 59.6
Os07g0270900 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 1.5e-73 280.4 199 68.3
Medtr2g103560 Medicago truncatula HOM05D003422 ORTHO05D004263 2.0e-73 280.0 329 55.6
Gohir.A12G199400 Gossypium hirsutum HOM05D003422 ORTHO05D004263 2.6e-73 279.6 211 77.7
Thecc.03G025100 Theobroma cacao HOM05D003422 ORTHO05D004263 2.6e-73 279.6 288 64.2
BcaC01g03409 Brassica carinata HOM05D003422 ORTHO05D004263 3.4e-73 279.3 295 54.9
C03p52870 Brassica napus HOM05D003422 ORTHO05D004263 3.4e-73 279.3 295 54.9
Lj1g0018398 Lotus japonicus HOM05D003422 ORTHO05D004263 7.5e-73 278.1 293 59.4
arahy.Tifrunner.gnm1.ann1.FFB06F Arachis hypogaea HOM05D003422 ORTHO05D004263 2.9e-72 276.2 277 59.6
Gohir.D12G202200 Gossypium hirsutum HOM05D003422 ORTHO05D004263 2.9e-72 276.2 296 63.9
Gorai.008G217200 Gossypium raimondii HOM05D003422 ORTHO05D004263 4.9e-72 275.4 294 63.9
AL1G31870 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 6.4e-72 275.0 215 67.0
TPR.G37166 Trifolium pratense HOM05D003422 ORTHO05D004263 6.4e-72 275.0 222 64.0
BolC3t17554H Brassica oleracea HOM05D003422 ORTHO05D004263 1.1e-71 274.2 297 53.9
Lsat_1_v5_gn_5_166341 Lactuca sativa HOM05D003422 ORTHO05D004263 4.1e-71 272.3 212 67.0
vmacro17129 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 5.4e-71 271.9 219 63.9
BraA03t13450Z Brassica rapa HOM05D003422 ORTHO05D004263 9.2e-71 271.2 298 54.4
ECA233G3049 Erigeron canadensis HOM05D003422 ORTHO05D004263 1.6e-70 270.4 297 61.6
EL10Ac6g13812 Beta vulgaris HOM05D003422 ORTHO05D004263 6.0e-70 268.5 295 52.5
SpUn0343_0020 Schrenkiella parvula HOM05D003422 ORTHO05D004263 6.0e-70 268.5 278 60.8
Rhsim06G0078600 Rhododendron simsii HOM05D003422 ORTHO05D004263 1.7e-69 266.9 394 43.4
Mapoly0061s0104 Marchantia polymorpha HOM05D003422 ORTHO05D004263 1.1e-68 264.2 223 59.6
A03p43080 Brassica napus HOM05D003422 ORTHO05D004263 1.5e-68 263.8 324 49.1
AL1G37060 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 1.9e-68 263.5 215 65.1
CDE02G2608 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 1.9e-68 263.5 193 74.1
SMO331G0073 Selaginella moellendorffii HOM05D003422 ORTHO05D004263 4.7e-67 258.8 235 59.1
Pp3c2_4220 Physcomitrium patens HOM05D003422 ORTHO05D004263 5.2e-66 255.4 216 59.7
CBR_g32274 Chara braunii HOM05D003422 ORTHO05D004263 1.5e-65 253.8 227 62.1
Actinidia27808 Actinidia chinensis HOM05D003422 ORTHO05D004263 3.2e-63 246.1 214 62.1
A01p32170 Brassica napus HOM05D003422 ORTHO05D004263 7.1e-63 245.0 214 61.7
BcaC09g49229 Brassica carinata HOM05D003422 ORTHO05D004263 3.5e-62 242.7 281 52.7
AUR62003555 Chenopodium quinoa HOM05D003422 ORTHO05D004263 7.8e-62 241.5 301 49.2
AUR62017869 Chenopodium quinoa HOM05D003422 ORTHO05D004263 3.0e-61 239.6 300 48.3
Nitab4.5_0000979g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 4.3e-60 235.7 154 76.0
BraA01t03342Z Brassica rapa HOM05D003422 ORTHO05D004263 5.6e-60 235.3 218 59.2
vmacro16194 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 3.6e-59 232.6 204 60.3
CDE05G1364 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 1.4e-58 230.7 128 83.6
Medtr4g079190 Medicago truncatula HOM05D003422 ORTHO05D004263 1.4e-58 230.7 301 49.2
SEGI_01875 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 6.8e-58 228.4 128 84.4
ATR0996G003 Amborella trichopoda HOM05D003422 ORTHO05D004263 2.6e-57 226.5 197 59.9
Cre02.g145231 Chlamydomonas reinhardtii HOM05D003422 ORTHO05D004263 2.2e-56 223.4 202 54.0
PRCOL_00004566 Prasinoderma coloniale HOM05D003422 ORTHO05D004263 2.4e-55 219.9 192 55.2
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 1.3e-53 214.2 155 83.9
FvH4_7g31100 Fragaria vesca HOM05D003422 ORTHO05D004263 4.3e-52 209.1 192 56.2
Prupe.8G011700 Prunus persica HOM05D003422 ORTHO05D004263 9.0e-50 201.4 238 56.7
Pp3c1_36430 Physcomitrium patens HOM05D003422 ORTHO05D004263 3.8e-48 196.1 217 47.9
Actinidia01349 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.9e-47 193.7 271 54.2
MCO01G280 Micromonas commoda HOM05D003422 ORTHO05D004263 1.1e-42 177.9 207 52.7
Cfa026988 Carpinus fangiana HOM05D003422 ORTHO05D004263 5.8e-41 172.2 186 48.4
Eucgr.K00976 Eucalyptus grandis HOM05D003422 ORTHO05D004263 6.4e-40 168.7 213 52.1
Haze_26253 Corylus avellana HOM05D003422 ORTHO05D004263 8.4e-40 168.3 206 50.5
Lj1A759T42 Lonicera japonica HOM05D003422 ORTHO05D004263 7.9e-30 135.2 117 72.6
BolC1t04073H Brassica oleracea HOM05D003422 ORTHO05D004263 2.3e-29 133.7 71 81.7
C01p41190 Brassica napus HOM05D003422 ORTHO05D004263 3.9e-29 132.9 71 80.3
Eucgr.B00881 Eucalyptus grandis HOM05D003422 ORTHO05D004263 5.6e-28 129.0 71 90.1
AagrBONN_evm.TU.Sc2ySwM_344.1527 Anthoceros agrestis HOM05D003422 ORTHO05D004263 1.7e-24 117.5 167 48.5
Os07g0271600 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 2.2e-24 117.1 77 71.4
BolC4t24676H Brassica oleracea HOM05D003422 ORTHO05D004263 6.5e-24 115.5 116 58.6
BcaB04g17046 Brassica carinata HOM05D003422 ORTHO05D004263 1.3e-21 107.8 72 76.4
Ah.04g165080 Amaranthus hybridus HOM05D002611 ORTHO05D002822 3.0e-21 106.7 111 57.7
FAN06G3710 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.3e-19 101.3 46 91.3
BcaB01g03637 Brassica carinata HOM05D003422 ORTHO05D004263 2.2e-19 100.5 77 71.4
BcaB07g33435 Brassica carinata HOM05D003422 ORTHO05D004263 4.5e-17 92.8 77 67.5
Oeu036040.1 Olea europaea HOM05D003422 ORTHO05D004263 1.2e-14 84.7 130 43.1
BcaB01g02833 Brassica carinata HOM05D003422 ORTHO05D004263 3.0e-13 80.1 76 60.5
BcaC02g10230 Brassica carinata HOM05D003422 ORTHO05D004263 2.0e-12 77.4 73 61.6
FAN10G4221 Fragaria x ananassa HOM05D003422 ORTHO05D004263 2.5e-12 77.0 84 52.4
Nitab4.5_0000979g0020 Nicotiana tabacum HOM05D003422 ORTHO05D004263 1.0e-08 65.1 81 48.1
SEGI_38458 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 1.0e-08 65.1 168 31.0
vmacro17128 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 8.5e-08 62.0 129 36.4
TWI60G0838 Tripterygium wilfordii HOM05D003422 ORTHO05D413943 9.4e-07 58.5 36 77.8
BcaC09g49085 Brassica carinata HOM05D001456 ORTHO05D015898 3.6e-06 56.6 108 38.9


User provided reference genes

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