Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 5.8e-115 417.5 208 100.0
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.3e-37 160.6 103 73.8
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.3e-37 160.6 102 73.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 2.9e-37 159.5 102 72.5
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 4.9e-37 158.7 101 73.3
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 4.9e-37 158.7 101 73.3
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 4.1e-36 155.6 101 70.3
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.1e-36 155.6 101 72.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 5.4e-36 155.2 101 69.3
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.7e-35 152.9 103 70.9
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 3.5e-35 152.5 101 78.2
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 3.5e-35 152.5 101 78.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 4.6e-35 152.1 104 72.1
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.6e-35 152.1 103 74.8
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 4.6e-35 152.1 101 70.3
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 4.6e-35 152.1 101 70.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 6.0e-35 151.8 105 68.6
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 6.0e-35 151.8 103 71.8
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 7.8e-35 151.4 101 71.3
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 7.8e-35 151.4 103 72.8
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.8e-35 151.4 103 72.8
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.3e-34 150.6 101 73.3
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.7e-34 150.2 101 77.2
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.3e-34 149.8 101 70.3
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 3.9e-34 149.1 101 70.3
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 5.1e-34 148.7 95 78.9
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 5.1e-34 148.7 102 70.6
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 5.1e-34 148.7 101 70.3
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 5.1e-34 148.7 101 66.3
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.5e-33 146.4 107 72.9
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.3e-33 146.0 104 74.0
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.6e-33 145.2 111 64.9
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 9.5e-33 144.4 96 68.8
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 9.5e-33 144.4 96 68.8
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.6e-32 143.7 112 65.2
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.6e-32 143.7 95 68.4
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 2.1e-32 143.3 102 65.7
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 2.1e-32 143.3 111 64.9
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 2.1e-32 143.3 102 73.5
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 2.8e-32 142.9 101 73.3
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.6e-32 142.5 96 77.1
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.6e-32 142.5 103 69.9
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 4.7e-32 142.1 104 72.1
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.7e-32 142.1 95 69.5
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 8.1e-32 141.4 101 64.4
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.1e-31 141.0 104 71.2
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.1e-31 141.0 102 70.6
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.1e-31 141.0 101 65.3
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.8e-31 140.2 108 65.7
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.1e-31 139.4 102 74.5
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 3.1e-31 139.4 103 69.9
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 8.9e-31 137.9 104 73.1
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.2e-30 137.5 101 68.3
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.2e-30 137.5 106 72.6
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.5e-30 137.1 107 71.0
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 3.4e-30 136.0 111 68.5
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.4e-30 136.0 97 67.0
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 4.4e-30 135.6 111 62.2
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 9.9e-30 134.4 102 69.6
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 9.9e-30 134.4 108 72.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.3e-29 134.0 108 62.0
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.2e-29 133.3 110 69.1
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 2.2e-29 133.3 102 64.7
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 2.9e-29 132.9 111 64.9
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 2.9e-29 132.9 111 64.9
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.9e-29 132.1 104 71.2
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 4.9e-29 132.1 96 67.7
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 8.4e-29 131.3 95 64.2
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 8.4e-29 131.3 114 66.7
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.1e-28 131.0 112 67.0
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.1e-28 131.0 112 67.0
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.1e-28 131.0 102 71.6
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.1e-28 131.0 102 71.6
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.1e-28 131.0 93 66.7
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.4e-28 130.6 113 66.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.9e-28 130.2 102 63.7
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 2.4e-28 129.8 94 69.1
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 3.2e-28 129.4 100 70.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 4.2e-28 129.0 107 72.9
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 5.4e-28 128.6 110 67.3
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 7.1e-28 128.3 110 68.2
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.2e-27 127.5 112 65.2
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 2.1e-27 126.7 113 65.5
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 3.5e-27 125.9 95 66.3
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 3.5e-27 125.9 110 60.0
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.3e-26 124.0 102 57.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 3.9e-26 122.5 108 63.0
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 6.6e-26 121.7 106 66.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 6.6e-26 121.7 106 66.0
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 8.7e-26 121.3 113 63.7
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.5e-25 120.6 106 65.1
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.9e-25 120.2 115 62.6
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 7.3e-25 118.2 89 71.9
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 7.3e-25 118.2 89 71.9
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 9.6e-25 117.9 84 72.6
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.6e-24 117.1 111 61.3
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.6e-24 117.1 113 61.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 2.1e-24 116.7 105 66.7
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.1e-24 116.7 108 64.8
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 4.7e-24 115.5 85 64.7
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 8.1e-24 114.8 106 63.2
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 6.9e-23 111.7 102 62.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 5.8e-22 108.6 111 56.8
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.3e-21 107.5 102 57.8
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.9e-21 106.3 108 60.2
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 6.4e-21 105.1 86 60.5
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 8.4e-21 104.8 110 56.4
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.4e-20 103.2 78 74.4
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 7.8e-19 98.2 95 54.7
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.1e-17 94.4 63 69.8
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 1.6e-16 90.5 86 66.3
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.7e-13 80.5 68 75.0
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.7e-13 80.5 81 65.4
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.9e-13 79.0 94 46.8
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 3.2e-12 76.3 104 51.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 8.7e-10 68.2 114 40.4
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 7.4e-09 65.1 55 76.4
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 7.4e-09 65.1 103 45.6
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.3e-08 64.3 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 3.1e-07 59.7 61 42.6
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 6.9e-07 58.5 50 58.0


User provided reference genes

Program Settings