Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 3.4e-166 588.2 284 100.0
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 6.3e-128 461.1 285 80.4
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.5e-126 456.4 287 79.8
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 1.5e-126 456.4 284 81.0
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.0e-126 456.1 286 78.7
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 1.7e-125 453.0 287 79.1
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 1.1e-124 450.3 287 78.4
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 1.1e-124 450.3 287 78.4
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.5e-124 449.1 289 78.2
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 3.2e-124 448.7 287 78.4
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 7.2e-124 447.6 237 88.2
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 4.7e-123 444.9 287 76.3
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 4.7e-123 444.9 288 76.7
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 1.0e-122 443.7 288 76.0
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.4e-122 443.4 287 77.7
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.4e-122 443.4 287 77.7
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 1.4e-122 443.4 287 76.7
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 1.4e-122 443.4 287 78.0
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 2.3e-122 442.6 288 75.7
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 3.0e-122 442.2 286 78.3
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 5.2e-122 441.4 283 76.0
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 5.2e-122 441.4 287 76.0
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 6.7e-122 441.0 284 76.4
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 8.8e-122 440.7 287 75.6
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 1.5e-121 439.9 290 75.2
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 2.0e-121 439.5 283 77.4
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.0e-121 439.5 287 76.0
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 2.6e-121 439.1 286 76.6
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 2.6e-121 439.1 286 76.2
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 3.3e-121 438.7 286 76.9
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 3.3e-121 438.7 286 76.9
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 5.7e-121 438.0 286 77.6
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 7.5e-121 437.6 287 74.9
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 7.5e-121 437.6 289 74.7
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 1.3e-120 436.8 287 75.3
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 1.3e-120 436.8 281 75.8
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 1.7e-120 436.4 286 75.9
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 1.7e-120 436.4 237 84.8
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 1.7e-120 436.4 287 74.6
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 2.8e-120 435.6 295 73.9
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 3.7e-120 435.3 287 75.3
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 4.8e-120 434.9 286 76.2
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 4.8e-120 434.9 287 73.9
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 6.3e-120 434.5 286 75.2
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 6.3e-120 434.5 287 75.3
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 8.2e-120 434.1 286 75.2
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 1.1e-119 433.7 287 74.9
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.4e-119 433.3 287 75.3
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 1.4e-119 433.3 287 75.3
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.8e-119 433.0 287 75.3
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.8e-119 433.0 287 74.2
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 2.4e-119 432.6 286 74.5
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.2e-118 430.3 286 74.1
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 1.6e-118 429.9 285 73.7
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 2.0e-118 429.5 286 73.1
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 2.6e-118 429.1 236 83.5
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.6e-118 429.1 285 74.4
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 3.5e-118 428.7 286 74.1
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 4.5e-118 428.3 288 75.0
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 7.7e-118 427.6 287 73.2
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 1.7e-117 426.4 287 74.2
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 2.9e-117 425.6 291 73.2
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 2.9e-117 425.6 237 84.4
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 3.8e-117 425.2 286 72.7
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 5.0e-117 424.9 287 73.5
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 8.5e-117 424.1 236 82.6
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 8.5e-117 424.1 287 72.8
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 8.5e-117 424.1 285 73.7
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 1.1e-116 423.7 235 83.8
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.9e-116 422.9 305 71.1
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 2.5e-116 422.5 286 72.7
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 3.2e-116 422.2 286 71.7
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 4.2e-116 421.8 284 72.2
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 5.5e-116 421.4 287 74.2
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 9.4e-116 420.6 237 82.7
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 9.4e-116 420.6 295 69.8
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 9.4e-116 420.6 284 72.5
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 9.4e-116 420.6 285 73.3
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.2e-115 420.2 285 73.3
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 1.6e-115 419.9 237 82.3
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 1.6e-115 419.9 287 72.1
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.6e-115 419.9 287 73.2
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 2.1e-115 419.5 285 73.7
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 2.1e-115 419.5 285 73.7
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 6.1e-115 417.9 286 73.8
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 8.0e-115 417.5 296 70.6
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.0e-114 417.2 288 71.5
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 1.4e-114 416.8 286 72.0
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 1.4e-114 416.8 287 73.2
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 1.4e-114 416.8 287 73.2
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 2.3e-114 416.0 287 72.5
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 4.0e-114 415.2 287 72.5
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 1.2e-113 413.7 287 72.5
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 1.5e-113 413.3 287 72.8
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 2.0e-113 412.9 280 72.1
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 4.4e-113 411.8 289 71.6
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.5e-113 411.0 295 68.8
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 7.5e-113 411.0 235 79.1
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 7.5e-113 411.0 287 73.5
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 9.8e-113 410.6 236 80.5
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 9.8e-113 410.6 236 80.5
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 2.2e-112 409.5 294 68.7
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 2.4e-111 406.0 281 69.0
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 3.5e-110 402.1 299 67.6
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.0e-109 400.6 297 67.3
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 1.3e-109 400.2 285 67.7
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 3.2e-108 395.6 287 68.6
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 1.8e-106 389.8 248 72.6
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 4.0e-106 388.7 286 69.2
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 1.2e-105 387.1 279 68.8
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 1.2e-105 387.1 291 63.2
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 1.3e-101 373.6 249 75.5
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 8.6e-101 370.9 287 65.5
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 2.5e-100 369.4 237 75.1
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 7.5e-97 357.8 235 70.6
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 3.7e-96 355.5 236 71.6
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 3.5e-94 349.0 291 62.2
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 1.7e-93 346.7 238 67.2
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 4.1e-87 325.5 235 70.6
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 2.0e-81 306.6 218 69.7
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 2.9e-80 302.8 241 62.2
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 3.5e-78 295.8 197 74.6
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 2.7e-70 269.6 236 52.5
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 3.0e-69 266.2 263 55.1
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 5.6e-60 235.3 244 51.6
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 7.3e-60 235.0 167 72.5
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 1.6e-59 233.8 121 88.4
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 8.1e-59 231.5 232 49.6
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 2.0e-57 226.9 212 53.3
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 4.2e-55 219.2 236 49.2
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 4.2e-47 192.6 115 75.7
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 6.9e-42 175.3 104 75.0
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 1.8e-13 80.9 51 74.5
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 2.2e-11 73.9 56 57.1
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 1.4e-10 71.2 55 63.6
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 2.1e-06 57.4 39 74.4


User provided reference genes

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