Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20502 Utricularia gibba HOM05D005389 ORTHO05D008484 3.5e-111 404.8 186 100.0
Migut.H00153 Erythranthe guttata HOM05D005389 ORTHO05D008484 8.5e-57 224.2 108 92.6
GSVIVG01032529001 Vitis vinifera HOM05D005389 ORTHO05D008484 2.5e-56 222.6 108 92.6
CSS0036605 Camellia sinensis var. sinensis HOM05D005389 ORTHO05D008484 3.2e-56 222.2 114 88.6
SalBow1G5751 Salvia bowleyana HOM05D005389 ORTHO05D008484 7.2e-56 221.1 108 90.7
Sp3g00690 Schrenkiella parvula HOM05D005389 ORTHO05D008484 1.2e-55 220.3 108 88.9
Sc06g0002580 Simmondsia chinensis HOM05D005389 ORTHO05D008484 1.2e-55 220.3 108 88.9
SGA_v2.0_scaffold135G34838 Striga asiatica HOM05D005389 ORTHO05D008484 1.6e-55 219.9 108 91.7
Cc07_g02570 Coffea canephora HOM05D005389 ORTHO05D008484 2.1e-55 219.5 108 90.7
Thhalv10021056m.g Eutrema salsugineum HOM05D005389 ORTHO05D008484 2.1e-55 219.5 113 86.7
CARHR075590 Cardamine hirsuta HOM05D005389 ORTHO05D008484 2.7e-55 219.2 108 88.9
Lj1g0011358 Lotus japonicus HOM05D005389 ORTHO05D008484 2.7e-55 219.2 108 90.7
Ah.16g106960 Amaranthus hybridus HOM05D005389 ORTHO05D008484 3.6e-55 218.8 108 89.8
Hma1.2p1_0697F.1_g204985 Hydrangea macrophylla HOM05D005389 ORTHO05D008484 4.7e-55 218.4 108 89.8
Aa31LG5G10500 Aethionema arabicum HOM05D005389 ORTHO05D008484 6.1e-55 218.0 108 87.0
BolC5t35145H Brassica oleracea HOM05D005389 ORTHO05D008484 6.1e-55 218.0 114 83.3
Duzib264G0565 Durio zibethinus HOM05D005389 ORTHO05D008484 6.1e-55 218.0 108 89.8
Thhalv10022528m.g Eutrema salsugineum HOM05D005389 ORTHO05D008484 6.1e-55 218.0 108 88.0
Cfa007465 Carpinus fangiana HOM05D005389 ORTHO05D008484 7.9e-55 217.6 108 88.9
ECA232G1242 Erigeron canadensis HOM05D005389 ORTHO05D008484 7.9e-55 217.6 108 89.8
BcaC05g30466 Brassica carinata HOM05D005389 ORTHO05D008484 1.0e-54 217.2 114 82.5
A05p44600 Brassica napus HOM05D005389 ORTHO05D008484 1.0e-54 217.2 114 82.5
Manes.17G118300 Manihot esculenta HOM05D005389 ORTHO05D008484 1.0e-54 217.2 109 89.0
Eucgr.I01836 Eucalyptus grandis HOM05D005389 ORTHO05D008484 1.8e-54 216.5 108 88.0
Lsat_1_v5_gn_4_181101 Lactuca sativa HOM05D005389 ORTHO05D008484 1.8e-54 216.5 108 88.9
MBI14_g02685_MAGBIO Magnolia biondii HOM05D005389 ORTHO05D008484 1.8e-54 216.5 114 86.0
MD09G1038400 Malus domestica HOM05D005389 ORTHO05D008484 1.8e-54 216.5 108 89.8
MD17G1039500 Malus domestica HOM05D005389 ORTHO05D008484 1.8e-54 216.5 108 89.8
Ciclev10010988m.g Citrus clementina HOM05D005389 ORTHO05D008484 2.3e-54 216.1 109 88.1
Aqoxy3G00899 Aquilegia oxysepala HOM05D005389 ORTHO05D008484 3.0e-54 215.7 108 88.0
BraA05t23196Z Brassica rapa HOM05D005389 ORTHO05D008484 3.0e-54 215.7 114 82.5
COL.COLO4_06141 Corchorus olitorius HOM05D005389 ORTHO05D008484 3.0e-54 215.7 115 84.3
QL02p077913 Quercus lobata HOM05D005389 ORTHO05D008484 3.0e-54 215.7 108 88.0
Thecc.04G003900 Theobroma cacao HOM05D005389 ORTHO05D008484 3.0e-54 215.7 108 88.0
AUR62032098 Chenopodium quinoa HOM05D005389 ORTHO05D008484 3.9e-54 215.3 108 88.0
AUR62037862 Chenopodium quinoa HOM05D005389 ORTHO05D008484 3.9e-54 215.3 108 88.0
Cpa.g.sc14.89 Carica papaya HOM05D005389 ORTHO05D008484 5.1e-54 214.9 108 88.9
Haze_14630 Corylus avellana HOM05D005389 ORTHO05D008484 5.1e-54 214.9 108 87.0
C09p75190 Brassica napus HOM05D005389 ORTHO05D008484 6.7e-54 214.5 108 86.1
CiPaw.03G035000 Carya illinoinensis HOM05D005389 ORTHO05D008484 6.7e-54 214.5 108 87.0
C07p01310 Brassica napus HOM05D005389 ORTHO05D008484 8.8e-54 214.2 114 82.5
Lalb_Chr21g0316351 Lupinus albus HOM05D005389 ORTHO05D008484 8.8e-54 214.2 108 87.0
AL3G10820 Arabidopsis lyrata HOM05D005389 ORTHO05D008484 1.1e-53 213.8 108 87.0
Carub.0003s0071 Capsella rubella HOM05D005389 ORTHO05D008484 1.1e-53 213.8 108 87.0
Solyc02g087170.4 Solanum lycopersicum HOM05D005389 ORTHO05D008484 1.1e-53 213.8 108 86.1
Sopen02g031910 Solanum pennellii HOM05D005389 ORTHO05D008484 1.1e-53 213.8 108 86.1
PGSC0003DMG400000509 Solanum tuberosum HOM05D005389 ORTHO05D008484 1.1e-53 213.8 114 82.5
AT3G01380 Arabidopsis thaliana HOM05D005389 ORTHO05D008484 1.5e-53 213.4 108 86.1
Gohir.D07G225200 Gossypium hirsutum HOM05D005389 ORTHO05D008484 1.5e-53 213.4 108 87.0
Gorai.001G259600 Gossypium raimondii HOM05D005389 ORTHO05D008484 1.5e-53 213.4 108 87.0
vmacro05794 Vaccinium macrocarpon HOM05D005389 ORTHO05D008484 1.5e-53 213.4 108 87.0
arahy.Tifrunner.gnm1.ann1.D3X87A Arachis hypogaea HOM05D005389 ORTHO05D008484 2.0e-53 213.0 108 85.2
arahy.Tifrunner.gnm1.ann1.T59QJ9 Arachis hypogaea HOM05D005389 ORTHO05D008484 2.0e-53 213.0 108 85.2
THA.LOC104821073 Tarenaya hassleriana HOM05D005389 ORTHO05D008484 2.0e-53 213.0 114 83.3
Atru.chr8.2421 Acer truncatum HOM05D005389 ORTHO05D008484 2.6e-53 212.6 108 87.0
Potri.001G350700 Populus trichocarpa HOM05D005389 ORTHO05D008484 2.6e-53 212.6 108 86.1
Sabra16G0230200 Salix brachista HOM05D005389 ORTHO05D008484 2.6e-53 212.6 108 86.1
Rhsim10G0027600 Rhododendron simsii HOM05D005389 ORTHO05D008484 3.3e-53 212.2 108 86.1
Lju41A31T33 Lonicera japonica HOM05D005389 ORTHO05D008484 5.7e-53 211.5 108 87.0
PGR142G1957 Punica granatum HOM05D005389 ORTHO05D008484 5.7e-53 211.5 114 82.5
CAN.G206.54 Capsicum annuum HOM05D005389 ORTHO05D008484 7.4e-53 211.1 108 85.2
Gohir.A07G218100 Gossypium hirsutum HOM05D005389 ORTHO05D008484 7.4e-53 211.1 108 86.1
TWI36G1051 Tripterygium wilfordii HOM05D005389 ORTHO05D008484 7.4e-53 211.1 108 86.1
CDE04G3020 Ceratophyllum demersum HOM05D005389 ORTHO05D008484 9.7e-53 210.7 108 83.3
HanXRQChr09g0265861 Helianthus annuus HOM05D005389 ORTHO05D008484 1.3e-52 210.3 108 87.0
FAN09G2300 Fragaria x ananassa HOM05D005389 ORTHO05D008484 1.7e-52 209.9 108 87.0
Medtr7g030060 Medicago truncatula HOM05D005389 ORTHO05D008484 1.7e-52 209.9 108 84.3
Medtr7g038700 Medicago truncatula HOM05D005389 ORTHO05D008484 1.7e-52 209.9 108 84.3
PSO478G0736 Papaver somniferum HOM05D005389 ORTHO05D008484 1.7e-52 209.9 109 85.3
RcHm_v2.0_Chr2g0170441 Rosa chinensis HOM05D005389 ORTHO05D008484 1.7e-52 209.9 108 87.0
DCAR_013961 Daucus carota HOM05D005389 ORTHO05D008484 2.2e-52 209.5 108 85.2
Ca_19612_v3 Cicer arietinum L. HOM05D005389 ORTHO05D008484 2.8e-52 209.1 108 84.3
Psat3g165760 Pisum sativum HOM05D005389 ORTHO05D008484 2.8e-52 209.1 108 84.3
TAR374G1603 Trochodendron aralioides HOM05D005389 ORTHO05D008484 3.7e-52 208.8 108 86.1
FvH4_6g50180 Fragaria vesca HOM05D005389 ORTHO05D008484 6.3e-52 208.0 108 86.1
FAN02G4477 Fragaria x ananassa HOM05D005389 ORTHO05D008484 6.3e-52 208.0 108 86.1
FAN05G2940 Fragaria x ananassa HOM05D005389 ORTHO05D008484 6.3e-52 208.0 108 86.1
FAN14G3523 Fragaria x ananassa HOM05D005389 ORTHO05D008484 6.3e-52 208.0 108 86.1
Nitab4.5_0001952g0170 Nicotiana tabacum HOM05D005389 ORTHO05D008484 6.3e-52 208.0 110 84.5
Nitab4.5_0005206g0050 Nicotiana tabacum HOM05D005389 ORTHO05D008484 6.3e-52 208.0 110 84.5
PSO161G0132 Papaver somniferum HOM05D005389 ORTHO05D008484 1.4e-51 206.8 109 84.4
Prupe.3G279400 Prunus persica HOM05D005389 ORTHO05D008484 1.4e-51 206.8 108 84.3
Glyma.01G077400 Glycine max HOM05D005389 ORTHO05D008484 4.1e-51 205.3 108 84.3
VMungo1383G0108 Vigna mungo HOM05D005389 ORTHO05D008484 5.3e-51 204.9 108 83.3
ATR0800G105 Amborella trichopoda HOM05D005389 ORTHO05D008484 1.5e-50 203.4 108 83.3
Os02g0581000 Oryza sativa ssp. japonica HOM05D005389 ORTHO05D008484 1.5e-50 203.4 108 84.3
Phvul.008G153100 Phaseolus vulgaris HOM05D005389 ORTHO05D008484 1.5e-50 203.4 108 83.3
Zm00001eb245310 Zea mays HOM05D005389 ORTHO05D008484 2.0e-50 203.0 108 83.3
Prupe.2G019300 Prunus persica HOM05D005389 ORTHO05D008484 1.7e-49 199.9 108 81.5
AagrBONN_evm.TU.Sc2ySwM_368.926 Anthoceros agrestis HOM05D005389 ORTHO05D008484 5.0e-49 198.4 109 82.6
Pp3c17_22750 Physcomitrium patens HOM05D005389 ORTHO05D008484 4.2e-48 195.3 114 77.2
Hund19981 Selenicereus undatus HOM05D005389 ORTHO05D008484 4.7e-47 191.8 108 76.9
Mapoly0007s0201 Marchantia polymorpha HOM05D005389 ORTHO05D008484 1.4e-46 190.3 109 79.8
Hma1.2p1_1975F.1_g309760 Hydrangea macrophylla HOM05D005389 ORTHO05D008484 3.3e-45 185.7 121 72.7
HPP92_017062 Vanilla planifolia HOM05D005389 ORTHO05D008484 3.3e-45 185.7 108 75.9
SMO244G0055 Selaginella moellendorffii HOM05D005389 ORTHO05D008484 4.8e-44 181.8 109 76.1
RcHm_v2.0_Chr7g0219581 Rosa chinensis HOM05D005389 ORTHO05D008484 8.3e-36 154.5 108 70.4
MCO14G282 Micromonas commoda HOM05D005389 ORTHO05D008484 8.0e-31 137.9 113 56.6
Cfa024795 Carpinus fangiana HOM05D005389 ORTHO05D008484 1.2e-29 134.0 110 62.7
Peaxi162Scf00129g00824 Petunia axillaris HOM05D005389 ORTHO05D008484 1.7e-25 120.2 87 66.7
SEGI_22900 Sequoiadendron giganteum HOM05D005389 ORTHO05D008484 6.1e-23 111.7 64 81.2
TPR.G39126 Trifolium pratense HOM05D005389 ORTHO05D008484 5.0e-17 92.0 44 84.1
Gohir.D01G051322 Gossypium hirsutum HOM05D005389 ORTHO05D017049 4.7e-07 58.9 41 63.4
Gohir.D01G103701 Gossypium hirsutum HOM05D005389 ORTHO05D017049 4.7e-07 58.9 41 63.4
Gohir.D07G069451 Gossypium hirsutum HOM05D005389 ORTHO05D017049 4.7e-07 58.9 41 63.4
Gohir.D07G180351 Gossypium hirsutum HOM05D005389 ORTHO05D017049 4.7e-07 58.9 41 63.4
Gorai.010G191700 Gossypium raimondii HOM05D005389 ORTHO05D017049 4.7e-07 58.9 41 63.4
Gohir.D11G253466 Gossypium hirsutum HOM05D005389 ORTHO05D017049 1.1e-06 57.8 33 72.7
Gorai.007G272300 Gossypium raimondii HOM05D005389 ORTHO05D017049 1.1e-06 57.8 33 72.7
Gorai.008G095000 Gossypium raimondii HOM05D005389 ORTHO05D017049 1.1e-06 57.8 41 61.0
Gohir.D11G223028 Gossypium hirsutum HOM05D005389 ORTHO05D017049 1.4e-06 57.4 33 69.7
Gorai.009G374100 Gossypium raimondii HOM05D005389 ORTHO05D017049 6.8e-06 55.1 41 61.0


User provided reference genes

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