Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20485 Utricularia gibba HOM05D001177 ORTHO05D007091 3.6e-160 568.2 281 100.0
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 2.4e-31 140.2 197 45.2
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 1.2e-30 137.9 201 44.8
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.2e-30 137.9 202 42.1
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 1.6e-30 137.5 203 42.9
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 1.6e-30 137.5 188 44.7
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 1.6e-30 137.5 188 44.7
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 2.1e-30 137.1 205 44.9
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 4.6e-30 136.0 202 42.1
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 1.0e-29 134.8 200 43.0
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 1.0e-29 134.8 191 48.2
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 1.7e-29 134.0 202 44.6
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 1.7e-29 134.0 203 43.8
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 1.7e-29 134.0 203 44.8
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 5.1e-29 132.5 195 44.6
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 5.1e-29 132.5 205 42.4
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 8.7e-29 131.7 201 41.8
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 8.7e-29 131.7 200 41.0
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 1.1e-28 131.3 206 41.7
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 1.1e-28 131.3 204 44.1
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 1.9e-28 130.6 202 44.1
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 3.3e-28 129.8 210 42.4
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 3.3e-28 129.8 204 43.1
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 4.3e-28 129.4 206 43.7
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 4.3e-28 129.4 211 40.8
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 7.3e-28 128.6 187 43.3
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 9.6e-28 128.3 218 40.4
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 9.6e-28 128.3 195 46.2
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 9.6e-28 128.3 217 39.6
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 1.2e-27 127.9 204 44.6
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 1.2e-27 127.9 208 42.8
SHI03853 Sapria himalayana HOM05D001177 ORTHO05D007091 1.2e-27 127.9 211 38.9
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 1.6e-27 127.5 195 39.5
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 1.6e-27 127.5 214 43.5
Aa31LG2G5370 Aethionema arabicum HOM05D001177 ORTHO05D001507 2.1e-27 127.1 204 41.7
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 2.1e-27 127.1 177 45.8
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.1e-27 127.1 241 38.2
Cfa007285 Carpinus fangiana HOM05D001177 ORTHO05D007091 2.8e-27 126.7 187 41.2
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.8e-27 126.7 241 38.2
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 3.6e-27 126.3 219 38.8
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 4.7e-27 125.9 213 41.3
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 6.2e-27 125.6 206 40.3
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 8.1e-27 125.2 191 42.4
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 8.1e-27 125.2 198 40.9
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 1.1e-26 124.8 208 41.3
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 1.4e-26 124.4 208 41.8
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 1.8e-26 124.0 186 41.4
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 1.8e-26 124.0 205 38.5
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 1.8e-26 124.0 213 42.3
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 2.4e-26 123.6 207 38.6
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 2.4e-26 123.6 231 39.4
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 6.9e-26 122.1 190 40.5
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 9.0e-26 121.7 206 38.3
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 9.0e-26 121.7 213 39.0
C02p54100 Brassica napus HOM05D001177 ORTHO05D001507 1.2e-25 121.3 143 46.2
BolC2t11472H Brassica oleracea HOM05D001177 ORTHO05D001507 1.2e-25 121.3 143 46.2
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 1.5e-25 120.9 234 38.5
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 2.0e-25 120.6 243 38.7
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 2.6e-25 120.2 205 38.0
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 3.4e-25 119.8 189 39.2
FAN14G2882 Fragaria x ananassa HOM05D001177 ORTHO05D007091 3.4e-25 119.8 195 39.0
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 3.4e-25 119.8 210 38.6
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 4.4e-25 119.4 133 52.6
A02p35380 Brassica napus HOM05D001177 ORTHO05D007091 5.8e-25 119.0 143 44.8
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 5.8e-25 119.0 199 40.7
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 5.8e-25 119.0 207 39.1
Gorai.006G037700 Gossypium raimondii HOM05D001177 ORTHO05D007091 5.8e-25 119.0 187 41.2
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 5.8e-25 119.0 212 39.6
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 7.6e-25 118.6 199 38.7
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 9.9e-25 118.2 209 39.7
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 1.7e-24 117.5 196 38.3
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 1.7e-24 117.5 199 38.7
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 2.2e-24 117.1 148 46.6
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 2.2e-24 117.1 187 42.2
MBI11_g40895_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D007091 2.9e-24 116.7 237 37.6
FAN05G3425 Fragaria x ananassa HOM05D001177 ORTHO05D007091 3.8e-24 116.3 199 39.2
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 4.9e-24 115.9 195 41.0
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 4.9e-24 115.9 195 41.0
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.9e-24 115.9 194 37.6
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.9e-24 115.9 194 37.6
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 4.9e-24 115.9 162 47.5
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 4.9e-24 115.9 200 39.5
Hund24909 Selenicereus undatus HOM05D001177 ORTHO05D007091 4.9e-24 115.9 204 38.7
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 6.4e-24 115.5 175 41.7
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 6.4e-24 115.5 214 39.3
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 8.4e-24 115.2 135 48.1
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 1.1e-23 114.8 132 50.8
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 1.4e-23 114.4 139 48.2
FvH4_6g52470 Fragaria vesca HOM05D001177 ORTHO05D007091 1.4e-23 114.4 192 38.0
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 1.9e-23 114.0 201 38.8
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 1.9e-23 114.0 203 37.9
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 4.2e-23 112.8 132 50.0
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 5.4e-23 112.5 154 44.8
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 5.4e-23 112.5 135 50.4
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 9.3e-23 111.7 167 43.7
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.6e-22 110.9 226 36.3
PSO017G0460 Papaver somniferum HOM05D001177 ORTHO05D007091 3.5e-22 109.8 191 38.7
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 4.6e-22 109.4 195 40.5
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 6.0e-22 109.0 211 39.3
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 6.0e-22 109.0 198 37.9
PSO063G4178 Papaver somniferum HOM05D001177 ORTHO05D007091 1.0e-21 108.2 146 44.5
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 1.7e-21 107.5 125 48.0
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 2.3e-21 107.1 138 44.2
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 6.6e-21 105.5 124 50.0
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 8.7e-21 105.1 140 45.0
Zm00001eb111820 Zea mays HOM05D001177 ORTHO05D007091 1.9e-20 104.0 126 48.4
Thecc.04G025000 Theobroma cacao HOM05D001177 ORTHO05D007091 2.5e-20 103.6 165 41.2
Gohir.D09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 7.3e-20 102.1 71 70.4
Nitab4.5_0001544g0170 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.3e-19 101.3 119 48.7
Zm00001eb331370 Zea mays HOM05D001177 ORTHO05D007091 2.1e-19 100.5 198 38.4
Peaxi162Scf00080g01722 Petunia axillaris HOM05D001177 ORTHO05D007091 1.4e-18 97.8 170 39.4
ECA232G2835 Erigeron canadensis HOM05D003414 ORTHO05D003913 1.8e-18 97.4 73 61.6
Nitab4.5_0001544g0160 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.4e-18 97.1 58 75.9
PSO339G1540 Papaver somniferum HOM05D001177 ORTHO05D007091 9.0e-18 95.1 76 61.8
HPP92_004596 Vanilla planifolia HOM05D001177 ORTHO05D007091 2.0e-17 94.0 135 40.7
Nitab4.5_0005587g0090 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.9e-16 90.1 93 52.7
Cpa.g.sc1097.2 Carica papaya HOM05D001177 ORTHO05D007091 5.6e-12 75.9 197 31.0
Medtr7g035455 Medicago truncatula HOM05D001177 ORTHO05D007091 8.1e-11 72.0 122 38.5
SEGI_15562 Sequoiadendron giganteum HOM05D001177 ORTHO05D007091 8.1e-11 72.0 117 37.6
Mapoly0006s0009 Marchantia polymorpha HOM05D001177 ORTHO05D007091 1.1e-10 71.6 238 28.2
Medtr0044s0160 Medicago truncatula HOM05D001177 ORTHO05D007091 1.4e-10 71.2 56 60.7
CBR_g51805 Chara braunii HOM05D001177 ORTHO05D007091 3.1e-10 70.1 139 34.5
C07p39030 Brassica napus HOM05D001177 ORTHO05D007091 1.5e-09 67.8 144 30.6
Pp3c9_11850 Physcomitrium patens HOM05D001177 ORTHO05D007091 1.5e-09 67.8 53 60.4
Pp3c9_11853 Physcomitrium patens HOM05D001177 ORTHO05D007091 1.5e-09 67.8 53 60.4
Nn6g31539 Nelumbo nucifera HOM05D001177 ORTHO05D007091 2.6e-09 67.0 197 28.9
Medtr1g093975 Medicago truncatula HOM05D001177 ORTHO05D007091 1.4e-07 61.2 75 38.7
Medtr1g094005 Medicago truncatula HOM05D001177 ORTHO05D007091 1.4e-07 61.2 75 38.7
BcaC03g14536 Brassica carinata HOM05D001177 ORTHO05D007091 1.9e-07 60.8 129 31.0
Lj2g0025677 Lotus japonicus HOM05D005483 ORTHO05D007091 5.5e-07 59.3 46 67.4
AUR62005578 Chenopodium quinoa HOM05D001177 ORTHO05D007091 2.7e-06 57.0 157 28.7
CDE04G1204 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 4.6e-06 56.2 44 61.4


User provided reference genes

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