Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 0.0e+00 1327.0 691 100.0
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 8.4e-227 790.8 756 61.4
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 1.4e-226 790.0 759 61.4
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 1.9e-226 789.6 673 67.6
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 1.0e-219 767.3 736 61.7
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 1.0e-219 767.3 736 61.7
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 1.1e-218 763.8 772 59.6
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 6.1e-209 731.5 755 57.1
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 2.0e-207 726.5 762 56.8
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 3.3e-207 725.7 757 56.7
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 7.4e-207 724.5 759 57.0
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 4.1e-205 718.8 770 56.1
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 2.0e-204 716.5 759 55.9
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 4.5e-204 715.3 760 56.7
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.7e-203 713.4 767 56.2
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 2.5e-202 709.5 769 55.9
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 9.4e-202 707.6 770 55.1
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 2.1e-201 706.4 756 56.6
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 4.7e-201 705.3 760 55.5
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 8.0e-201 704.5 786 55.5
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.4e-200 703.7 765 55.6
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 3.0e-200 702.6 778 55.0
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 8.8e-200 701.0 777 54.6
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 8.8e-200 701.0 778 54.8
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 8.8e-200 701.0 773 55.1
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 3.3e-199 699.1 741 56.1
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 5.7e-199 698.4 768 56.2
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 7.4e-199 698.0 760 56.4
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 1.3e-198 697.2 772 54.3
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.7e-198 696.8 778 54.6
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 2.8e-198 696.0 739 56.6
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 2.8e-198 696.0 758 56.3
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 2.4e-197 693.0 749 56.1
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 7.0e-197 691.4 776 54.4
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 9.1e-197 691.0 762 54.7
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.6e-196 690.3 746 56.2
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 2.6e-196 689.5 759 55.1
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 1.3e-195 687.2 759 55.1
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 2.9e-195 686.0 759 55.3
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 8.5e-195 684.5 771 53.7
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 1.5e-194 683.7 780 54.1
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 1.5e-194 683.7 770 54.0
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 1.9e-194 683.3 803 53.9
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 2.5e-194 682.9 747 55.2
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 2.5e-194 682.9 771 52.5
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 3.2e-194 682.6 758 53.4
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 4.7e-193 678.7 762 54.3
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 6.1e-193 678.3 770 53.1
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 4.0e-192 675.6 779 54.4
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 5.2e-192 675.2 752 53.7
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 5.2e-192 675.2 771 52.8
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 2.0e-191 673.3 763 53.9
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 2.0e-191 673.3 754 53.1
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 2.6e-191 672.9 763 54.0
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 4.4e-191 672.2 769 54.4
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 4.4e-191 672.2 781 54.0
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 5.7e-191 671.8 768 53.5
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 1.3e-190 670.6 772 52.3
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 1.7e-190 670.2 762 53.8
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 1.7e-190 670.2 762 54.1
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 2.8e-190 669.5 771 52.9
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 3.7e-190 669.1 769 53.2
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.4e-189 667.2 731 55.4
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 1.8e-189 666.8 767 52.4
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 1.8e-189 666.8 769 52.4
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 3.1e-189 666.0 768 52.7
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 4.1e-189 665.6 767 52.7
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 4.1e-189 665.6 785 53.2
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 7.0e-189 664.8 765 53.3
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 1.2e-188 664.1 773 54.3
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 1.2e-188 664.1 769 53.2
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 1.2e-188 664.1 768 52.6
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 1.2e-188 664.1 722 55.3
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 3.5e-188 662.5 776 53.2
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 3.5e-188 662.5 749 53.8
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 5.9e-188 661.8 765 53.2
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 1.0e-187 661.0 760 53.7
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 1.0e-187 661.0 766 53.7
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 1.3e-187 660.6 769 52.7
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 1.3e-187 660.6 771 52.7
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 1.7e-187 660.2 769 52.4
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 1.7e-187 660.2 773 53.6
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 6.5e-187 658.3 767 52.2
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 1.5e-186 657.1 768 52.3
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 2.5e-186 656.4 768 52.0
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 5.5e-186 655.2 756 53.2
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 5.5e-186 655.2 762 53.1
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 7.2e-186 654.8 762 53.0
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 9.4e-186 654.4 746 52.8
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 1.2e-185 654.1 760 53.7
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 2.7e-185 652.9 759 52.8
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 3.6e-185 652.5 764 53.4
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 4.7e-185 652.1 764 52.9
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 8.0e-185 651.4 732 53.8
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 1.0e-184 651.0 767 52.0
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 1.0e-184 651.0 762 53.0
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 1.0e-184 651.0 767 52.9
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 1.4e-184 650.6 767 51.9
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 4.0e-184 649.0 772 52.7
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 7.5e-183 644.8 728 52.9
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 1.3e-182 644.0 753 52.5
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 1.7e-182 643.7 763 52.4
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 1.7e-182 643.7 758 51.3
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 2.8e-182 642.9 767 52.7
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 3.7e-182 642.5 762 52.4
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 4.8e-182 642.1 758 52.2
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 1.6e-180 637.1 766 52.2
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 1.7e-179 633.6 775 52.3
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.7e-179 633.6 740 53.0
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 2.3e-179 633.3 773 51.5
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.5e-178 630.6 784 51.3
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 1.5e-178 630.6 760 52.6
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 4.2e-178 629.0 720 53.1
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 5.5e-178 628.6 758 51.7
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 2.8e-177 626.3 740 53.0
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 4.7e-177 625.5 762 51.6
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 4.7e-177 625.5 756 51.2
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 6.1e-177 625.2 784 51.0
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 1.0e-176 624.4 763 52.3
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 1.2e-175 620.9 751 52.5
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 1.5e-175 620.5 758 51.6
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 3.4e-175 619.4 812 49.6
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 3.4e-175 619.4 772 50.8
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 2.4e-173 613.2 758 51.3
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 2.4e-173 613.2 770 51.0
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 2.7e-172 609.8 740 49.7
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 3.6e-169 599.4 739 51.7
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 2.9e-166 589.7 759 50.1
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 5.0e-163 578.9 727 51.4
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 4.3e-162 575.9 763 49.8
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 8.0e-161 571.6 766 48.4
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.0e-155 554.7 556 57.6
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 5.0e-155 552.4 768 47.7
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 1.1e-149 534.6 739 48.3
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 5.4e-149 532.3 753 47.9
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 8.9e-144 515.0 554 56.7
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 4.4e-143 512.7 821 45.7
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 1.6e-140 504.2 720 46.4
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 1.0e-139 501.5 736 46.6
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 8.1e-129 465.3 463 59.0
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 1.6e-113 414.5 394 59.1
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 9.7e-90 335.5 750 35.9
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.0e-83 315.5 650 37.1
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 1.4e-83 315.1 394 48.7
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 1.8e-80 304.7 307 57.0
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.4e-80 304.3 769 33.6
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.4e-80 304.3 769 33.6
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 1.6e-79 301.6 430 45.3
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 5.9e-79 299.7 778 33.9
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 8.0e-76 289.3 520 38.8
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 7.5e-74 282.7 357 49.0
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 2.9e-62 244.2 360 46.7
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 3.6e-60 237.3 587 33.0
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 8.3e-57 226.1 249 51.8
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.2e-55 222.2 248 56.5
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 1.9e-53 214.9 183 65.6
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 2.5e-53 214.5 256 52.7
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 3.2e-48 197.6 445 37.1
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 1.7e-46 191.8 312 38.5
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 1.5e-42 178.7 213 52.6
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 6.2e-36 156.8 127 63.0
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 2.6e-34 151.4 628 29.6
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 3.7e-33 147.5 144 55.6
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 1.2e-31 142.5 131 58.0
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 5.8e-26 123.6 91 67.0
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 1.7e-25 122.1 90 66.7
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 3.0e-22 111.3 87 65.5
DCAR_011288 Daucus carota HOM05D003681 ORTHO05D004703 8.1e-20 103.2 168 44.6
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 3.1e-19 101.3 51 92.2
RcHm_v2.0_Chr2g0166591 Rosa chinensis HOM05D003681 ORTHO05D004703 1.2e-18 99.4 57 82.5
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 2.4e-16 91.7 51 84.3
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 3.0e-14 84.7 91 50.5
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 8.7e-14 83.2 87 52.9
ECA247G3396 Erigeron canadensis HOM05D003681 ORTHO05D004703 1.9e-13 82.0 71 57.7
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 5.6e-13 80.5 329 28.3
SMO275G0001 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 5.6e-13 80.5 108 47.2
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 9.6e-13 79.7 41 87.8
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 6.2e-12 77.0 110 41.8
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 2.6e-10 71.6 192 32.8
SEGI_23209 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 2.2e-09 68.6 300 29.0
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 7.1e-08 63.5 215 27.9
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 7.9e-07 60.1 232 25.9


User provided reference genes

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