Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.9e-33 145.2 71 100.0
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.6e-30 134.8 69 92.8
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 2.6e-30 134.8 69 92.8
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.6e-30 134.8 69 92.8
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.6e-30 134.8 71 88.7
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 4.4e-30 134.0 71 87.3
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 5.8e-30 133.7 69 92.8
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 5.8e-30 133.7 71 88.7
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 7.5e-30 133.3 70 88.6
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 7.5e-30 133.3 71 88.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.3e-29 132.5 70 87.1
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.3e-29 132.5 70 87.1
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 1.3e-29 132.5 70 87.1
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 89.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.7e-29 132.1 70 90.0
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 1.7e-29 132.1 69 88.4
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.7e-29 132.1 71 87.3
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.7e-29 132.1 71 87.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.2e-29 131.7 71 87.3
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.2e-29 131.7 71 88.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 2.2e-29 131.7 71 85.9
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 2.2e-29 131.7 71 87.3
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.2e-29 131.7 71 87.3
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.2e-29 131.7 71 87.3
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 2.9e-29 131.3 70 88.6
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.7e-29 131.0 71 85.9
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.7e-29 131.0 71 87.3
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 4.9e-29 130.6 69 89.9
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 4.9e-29 130.6 69 88.4
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 4.9e-29 130.6 69 88.4
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.9e-29 130.6 70 87.1
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 4.9e-29 130.6 69 88.4
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 4.9e-29 130.6 70 85.7
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 6.4e-29 130.2 70 87.1
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 6.4e-29 130.2 70 87.1
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.4e-29 130.2 69 88.4
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.4e-29 130.2 69 88.4
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 6.4e-29 130.2 69 88.4
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 6.4e-29 130.2 70 87.1
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 6.4e-29 130.2 70 87.1
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 6.4e-29 130.2 70 87.1
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 6.4e-29 130.2 70 87.1
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 8.3e-29 129.8 69 88.4
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 8.3e-29 129.8 69 87.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 8.3e-29 129.8 70 87.1
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.1e-28 129.4 70 85.7
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.1e-28 129.4 70 85.7
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.1e-28 129.4 71 84.5
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.1e-28 129.4 71 85.9
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.1e-28 129.4 71 87.3
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.1e-28 129.4 70 85.7
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.1e-28 129.4 70 85.7
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.1e-28 129.4 70 87.1
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.1e-28 129.4 71 87.3
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.1e-28 129.4 71 85.9
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.4e-28 129.0 70 85.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.4e-28 129.0 70 87.1
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.4e-28 129.0 71 85.9
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.4e-28 129.0 69 85.5
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.4e-28 129.0 70 84.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.4e-28 129.0 70 88.6
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.9e-28 128.6 71 85.9
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.9e-28 128.6 71 85.9
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.9e-28 128.6 71 85.9
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.9e-28 128.6 69 88.4
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 84.3
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 85.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 84.3
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 85.7
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 84.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 84.3
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 87.1
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.4e-28 128.3 70 84.3
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 4.1e-28 127.5 69 87.0
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 4.1e-28 127.5 71 85.9
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 4.1e-28 127.5 70 85.7
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 5.4e-28 127.1 70 84.3
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 5.4e-28 127.1 70 82.9
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 5.4e-28 127.1 70 82.9
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.4e-28 127.1 70 82.9
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.4e-28 127.1 70 82.9
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.4e-28 127.1 70 85.7
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 5.4e-28 127.1 69 87.0
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 7.0e-28 126.7 70 84.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.6e-27 125.6 70 82.9
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.6e-27 125.6 69 85.5
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.5e-27 124.4 71 81.7
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 3.5e-27 124.4 70 80.0
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 4.6e-27 124.0 69 85.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 6.0e-27 123.6 70 81.4
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 7.8e-27 123.2 70 82.9
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 7.8e-27 123.2 70 82.9
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 7.8e-27 123.2 68 83.8
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 7.8e-27 123.2 71 81.7
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.9e-25 118.6 69 84.1
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 2.1e-24 115.2 63 87.3
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 6.2e-24 113.6 70 77.1
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 8.0e-24 113.2 69 73.9
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 8.9e-23 109.8 69 72.5
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.2e-22 109.4 69 69.6
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 4.4e-22 107.5 69 71.0
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.3e-21 105.9 69 63.8
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 7.8e-19 96.7 56 82.1
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 5.1e-18 94.0 48 85.4
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.1e-15 86.3 69 53.6
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.2e-14 82.8 44 84.1
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 2.6e-14 81.6 43 86.0
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 7.5e-14 80.1 68 51.5
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.6e-11 70.9 44 70.5


User provided reference genes

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