Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20436 Utricularia gibba HOM05D006000 ORTHO05D007749 9.4e-300 1032.7 509 100.0
Migut.D02037 Erythranthe guttata HOM05D006000 ORTHO05D007749 6.1e-158 561.6 482 59.8
MSTRG.4336 Avicennia marina HOM05D006000 ORTHO05D007749 1.0e-149 534.3 481 57.0
Oeu053502.2 Olea europaea HOM05D006000 ORTHO05D007749 5.4e-138 495.4 479 54.1
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 6.0e-137 491.9 466 54.5
SalBow8G1380 Salvia bowleyana HOM05D006000 ORTHO05D007749 1.0e-128 464.5 505 51.7
Actinidia36773 Actinidia chinensis HOM05D006000 ORTHO05D007749 2.7e-113 413.3 486 46.1
Nitab4.5_0006717g0030 Nicotiana tabacum HOM05D006000 ORTHO05D007749 2.4e-109 400.2 485 46.2
Nitab4.5_0001360g0160 Nicotiana tabacum HOM05D006000 ORTHO05D007749 6.9e-109 398.7 484 45.9
Lj9C473G6 Lonicera japonica HOM05D006000 ORTHO05D007749 1.7e-107 394.0 489 47.2
CAN.G472.50 Capsicum annuum HOM05D006000 ORTHO05D007749 4.9e-107 392.5 482 45.6
Atru.chr9.985 Acer truncatum HOM05D006000 ORTHO05D007749 1.9e-106 390.6 479 45.9
Prupe.5G160400 Prunus persica HOM05D006000 ORTHO05D007749 1.9e-106 390.6 483 45.1
Peaxi162Scf00089g00935 Petunia axillaris HOM05D006000 ORTHO05D007749 2.4e-106 390.2 481 46.4
Sopen03g030780 Solanum pennellii HOM05D006000 ORTHO05D007749 2.4e-106 390.2 482 45.9
MD14G1166100 Malus domestica HOM05D006000 ORTHO05D007749 3.2e-106 389.8 481 45.5
GSVIVG01007577001 Vitis vinifera HOM05D006000 ORTHO05D007749 3.2e-106 389.8 487 45.4
Solyc03g111660.3 Solanum lycopersicum HOM05D006000 ORTHO05D007749 5.4e-106 389.0 483 45.8
MD06G1160100 Malus domestica HOM05D006000 ORTHO05D007749 1.2e-105 387.9 482 45.6
HanXRQChr05g0156141 Helianthus annuus HOM05D006000 ORTHO05D007749 2.1e-105 387.1 484 46.5
CSS0006429 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 4.6e-105 386.0 483 44.9
Cfa018908 Carpinus fangiana HOM05D006000 ORTHO05D007749 4.6e-105 386.0 478 43.7
PGSC0003DMG400015231 Solanum tuberosum HOM05D006000 ORTHO05D007749 6.0e-105 385.6 482 45.6
RcHm_v2.0_Chr7g0191691 Rosa chinensis HOM05D006000 ORTHO05D007749 5.1e-104 382.5 486 45.5
Cc04_g10700 Coffea canephora HOM05D006000 ORTHO05D007749 2.5e-103 380.2 490 46.1
CSS0019701 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 4.3e-103 379.4 483 44.5
Lsat_1_v5_gn_5_13060 Lactuca sativa HOM05D006000 ORTHO05D007749 4.3e-103 379.4 478 45.8
ECA246G4586 Erigeron canadensis HOM05D006000 ORTHO05D007749 7.4e-103 378.6 486 44.7
TAR622G0802 Trochodendron aralioides HOM05D006000 ORTHO05D007749 6.2e-102 375.6 479 43.8
Gohir.D03G103100 Gossypium hirsutum HOM05D006000 ORTHO05D007749 2.4e-101 373.6 479 44.5
Ca_16102_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 4.5e-100 369.4 483 44.5
Ca_30078_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 4.5e-100 369.4 483 44.5
Nn4g22511 Nelumbo nucifera HOM05D006000 ORTHO05D007749 5.8e-100 369.0 479 43.0
Gohir.A03G063200 Gossypium hirsutum HOM05D006000 ORTHO05D007749 7.6e-100 368.6 479 44.1
Gorai.003G108600 Gossypium raimondii HOM05D006000 ORTHO05D007749 7.6e-100 368.6 488 44.7
EL10Ac7g18048 Beta vulgaris HOM05D006000 ORTHO05D007749 1.3e-99 367.9 477 44.4
FvH4_5g06990 Fragaria vesca HOM05D006000 ORTHO05D007749 2.9e-99 366.7 477 44.2
ClCG03G003330 Citrullus lanatus HOM05D006000 ORTHO05D007749 3.8e-99 366.3 481 43.7
Sabra15G0111200 Salix brachista HOM05D006000 ORTHO05D007749 3.8e-99 366.3 483 44.1
Haze_07292 Corylus avellana HOM05D006000 ORTHO05D007749 1.4e-98 364.4 510 41.2
Potri.015G088200 Populus trichocarpa HOM05D006000 ORTHO05D007749 1.9e-98 364.0 485 43.3
Medtr3g075250 Medicago truncatula HOM05D006000 ORTHO05D007749 2.5e-98 363.6 482 43.6
FAN18G3028 Fragaria x ananassa HOM05D006000 ORTHO05D007749 3.2e-98 363.2 478 43.9
QL10p005632 Quercus lobata HOM05D006000 ORTHO05D007749 4.2e-98 362.8 484 41.7
Phvul.009G170100 Phaseolus vulgaris HOM05D006000 ORTHO05D007749 5.5e-98 362.5 484 42.4
VMungo1309G2614 Vigna mungo HOM05D006000 ORTHO05D007749 5.5e-98 362.5 484 42.8
MELO3C002321.2 Cucumis melo HOM05D006000 ORTHO05D007749 1.2e-97 361.3 468 43.8
PSO782G4995 Papaver somniferum HOM05D006000 ORTHO05D007749 1.6e-97 360.9 483 43.1
Ciclev10024180m.g Citrus clementina HOM05D006000 ORTHO05D007749 2.7e-97 360.1 473 44.0
TWI39G0152 Tripterygium wilfordii HOM05D006000 ORTHO05D007749 3.5e-97 359.8 483 42.0
FAN08G3509 Fragaria x ananassa HOM05D006000 ORTHO05D007749 1.0e-96 358.2 486 42.8
Manes.06G113400 Manihot esculenta HOM05D006000 ORTHO05D007749 3.9e-96 356.3 483 43.5
Hund05620 Selenicereus undatus HOM05D006000 ORTHO05D007749 3.9e-96 356.3 480 41.9
Psat5g139520 Pisum sativum HOM05D006000 ORTHO05D007749 5.1e-96 355.9 462 44.4
Eucgr.B00167 Eucalyptus grandis HOM05D006000 ORTHO05D007749 8.7e-96 355.1 484 42.4
AL5G27780 Arabidopsis lyrata HOM05D006000 ORTHO05D007749 1.1e-95 354.8 484 43.4
AT3G48380 Arabidopsis thaliana HOM05D006000 ORTHO05D007749 1.1e-95 354.8 484 43.4
THA.LOC104818202 Tarenaya hassleriana HOM05D006000 ORTHO05D007749 2.5e-95 353.6 481 43.7
Aa31LG4G16970 Aethionema arabicum HOM05D006000 ORTHO05D007749 5.6e-95 352.4 483 42.9
Sp5g13670 Schrenkiella parvula HOM05D006000 ORTHO05D007749 5.6e-95 352.4 481 42.4
Carub.0005s1454 Capsella rubella HOM05D006000 ORTHO05D007749 7.4e-95 352.1 491 42.6
Lj1g0007517 Lotus japonicus HOM05D006000 ORTHO05D007749 7.4e-95 352.1 484 42.8
Sed0018918 Sechium edule HOM05D006000 ORTHO05D007749 7.4e-95 352.1 481 41.8
BcaC07g39322 Brassica carinata HOM05D006000 ORTHO05D007749 9.6e-95 351.7 480 40.8
BcaB01g00818 Brassica carinata HOM05D006000 ORTHO05D007749 2.8e-94 350.1 482 41.1
BraA06t25013Z Brassica rapa HOM05D006000 ORTHO05D007749 2.8e-94 350.1 481 40.7
CANSAT80G1864 Cannabis sativa HOM05D006000 ORTHO05D007749 6.2e-94 349.0 484 41.7
vmacro16696 Vaccinium macrocarpon HOM05D006000 ORTHO05D007749 1.1e-93 348.2 489 42.9
C08p23370 Brassica napus HOM05D006000 ORTHO05D007749 1.8e-93 347.4 481 40.7
BolC8t49966H Brassica oleracea HOM05D006000 ORTHO05D007749 1.8e-93 347.4 481 40.7
CsaV3_1G009140 Cucumis sativus L. HOM05D006000 ORTHO05D007749 1.8e-93 347.4 480 42.1
arahy.Tifrunner.gnm1.ann1.1AQ6ST Arachis hypogaea HOM05D006000 ORTHO05D007749 3.1e-93 346.7 465 44.9
A06p19300 Brassica napus HOM05D006000 ORTHO05D007749 5.3e-93 345.9 482 40.5
Thhalv10010185m.g Eutrema salsugineum HOM05D006000 ORTHO05D007749 9.0e-93 345.1 487 42.5
arahy.Tifrunner.gnm1.ann1.9XY5HM Arachis hypogaea HOM05D006000 ORTHO05D007749 1.2e-92 344.7 464 44.4
Dinv11120 Davidia involucrata HOM05D006000 ORTHO05D007749 2.6e-92 343.6 428 46.5
Glyma.06G174400 Glycine max HOM05D006000 ORTHO05D007749 1.0e-91 341.7 483 41.0
Glyma.04G191400 Glycine max HOM05D006000 ORTHO05D007749 4.9e-91 339.3 483 40.8
PGR083G2177 Punica granatum HOM05D006000 ORTHO05D007749 4.9e-91 339.3 487 41.5
CARHR157150 Cardamine hirsuta HOM05D006000 ORTHO05D007749 8.4e-91 338.6 481 41.6
Lalb_Chr11g0069771 Lupinus albus HOM05D006000 ORTHO05D007749 3.5e-89 333.2 462 42.2
FAN04G1552 Fragaria x ananassa HOM05D006000 ORTHO05D007749 1.3e-88 331.3 476 41.8
Sc10g0010320 Simmondsia chinensis HOM05D006000 ORTHO05D007749 3.9e-88 329.7 486 40.7
AUR62001257 Chenopodium quinoa HOM05D006000 ORTHO05D007749 3.3e-87 326.6 477 40.3
Rhsim12G0171000 Rhododendron simsii HOM05D006000 ORTHO05D007749 3.7e-86 323.2 446 44.2
HPP92_027096 Vanilla planifolia HOM05D006000 ORTHO05D007749 5.9e-84 315.8 480 40.2
CDE09G0792 Ceratophyllum demersum HOM05D006000 ORTHO05D007749 1.6e-81 307.8 476 37.8
Thecc.03G120400 Theobroma cacao HOM05D006000 ORTHO05D007749 1.6e-81 307.8 480 39.2
ATR0824G112 Amborella trichopoda HOM05D006000 ORTHO05D007749 3.0e-80 303.5 479 38.8
Os12g0285500 Oryza sativa ssp. japonica HOM05D006000 ORTHO05D007749 1.1e-77 295.0 480 38.8
TPR.G38611 Trifolium pratense HOM05D006000 ORTHO05D007749 1.5e-76 291.2 483 38.5
CiPaw.12G034200 Carya illinoinensis HOM05D006000 ORTHO05D007749 8.5e-75 285.4 370 43.2
Ah.15g095430 Amaranthus hybridus HOM05D006000 ORTHO05D007749 6.7e-72 275.8 477 36.1
DCAR_016429 Daucus carota HOM05D006000 ORTHO05D007749 1.4e-69 268.1 428 38.8
Zm00001eb133430 Zea mays HOM05D006000 ORTHO05D007749 9.4e-66 255.4 521 33.0
Actinidia08849 Actinidia chinensis HOM05D006000 ORTHO05D007749 1.1e-63 248.4 486 34.8
HPP92_021434 Vanilla planifolia HOM05D006000 ORTHO05D007749 1.7e-59 234.6 411 36.0
Cpa.g.sc4.40 Carica papaya HOM05D006000 ORTHO05D007749 8.0e-57 225.7 356 37.1
Mapoly0004s0201 Marchantia polymorpha HOM05D006000 ORTHO05D007749 1.6e-49 201.4 488 29.3
Dinv12561 Davidia involucrata HOM05D006000 ORTHO05D007749 1.6e-44 184.9 302 38.4
Pp3c6_16550 Physcomitrium patens HOM05D006000 ORTHO05D007749 1.1e-42 178.7 451 30.6
SMO201G0062 Selaginella moellendorffii HOM05D006000 ORTHO05D007749 5.5e-42 176.4 467 29.6
FvH4_5g06921 Fragaria vesca HOM05D006000 ORTHO05D007749 5.7e-39 166.4 254 38.2
FvH4_5g06950 Fragaria vesca HOM05D006000 ORTHO05D007749 2.3e-35 154.5 213 39.4
arahy.Tifrunner.gnm1.ann1.HVEI7F Arachis hypogaea HOM05D006000 ORTHO05D007749 1.0e-32 145.6 164 48.2
CBR_g41805 Chara braunii HOM05D006000 ORTHO05D007749 3.9e-27 127.1 204 37.3
DCAR_016428 Daucus carota HOM05D006000 ORTHO05D007749 1.3e-22 112.1 75 72.0
AagrBONN_evm.TU.Sc2ySwM_362.2604 Anthoceros agrestis HOM05D006000 ORTHO05D007749 1.7e-22 111.7 461 26.2
TAR622G0554 Trochodendron aralioides HOM05D006000 ORTHO05D007749 6.6e-19 99.8 159 39.6
arahy.Tifrunner.gnm1.ann1.1X7LEL Arachis hypogaea HOM05D000074 ORTHO05D007749 3.6e-17 94.0 293 26.6
Cre03.g197900 Chlamydomonas reinhardtii HOM05D006000 ORTHO05D007749 8.9e-16 89.4 173 34.7
FvH4_5g06922 Fragaria vesca HOM05D006000 ORTHO05D007749 8.9e-16 89.4 90 52.2
arahy.Tifrunner.gnm1.ann1.XFG60B Arachis hypogaea HOM05D006000 ORTHO05D007749 8.4e-06 56.2 122 32.8


User provided reference genes

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