Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 1.0e-279 966.1 482 100.0
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 1.4e-180 636.7 535 61.1
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 1.4e-180 636.7 478 66.9
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 8.6e-178 627.5 499 62.9
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 4.0e-175 618.6 502 61.8
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 1.5e-174 616.7 502 62.0
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 6.4e-173 611.3 494 62.3
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 6.4e-173 611.3 509 60.5
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 1.3e-170 603.6 502 60.4
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.6e-166 589.3 501 59.3
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 3.4e-166 589.0 509 59.1
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 3.2e-164 582.4 501 58.7
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 5.4e-164 581.6 516 58.7
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 6.0e-163 578.2 506 58.5
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 1.7e-162 576.6 495 59.4
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 5.1e-162 575.1 501 58.7
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.1e-161 573.9 521 56.8
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 2.5e-161 572.8 508 58.1
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 5.6e-161 571.6 501 58.7
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 1.8e-159 566.6 503 56.3
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 1.2e-158 563.9 511 58.5
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 9.9e-158 560.8 507 57.0
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 8.4e-157 557.8 506 57.3
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 1.1e-156 557.4 507 56.0
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 1.1e-156 557.4 506 56.9
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 1.4e-156 557.0 506 57.3
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 1.4e-156 557.0 506 57.7
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 1.9e-156 556.6 511 56.2
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 1.9e-156 556.6 506 57.1
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 2.4e-156 556.2 513 56.1
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 5.4e-156 555.1 508 56.7
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 5.4e-156 555.1 500 57.4
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 7.1e-156 554.7 501 56.5
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 1.6e-155 553.5 509 57.4
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 2.7e-155 552.7 524 55.5
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 4.6e-155 552.0 508 56.9
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 4.6e-155 552.0 506 56.9
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 1.7e-154 550.1 503 56.9
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 2.3e-154 549.7 534 53.9
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 1.1e-153 547.4 505 56.8
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.5e-153 547.0 503 57.1
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 3.3e-153 545.8 508 56.3
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 3.3e-153 545.8 504 55.4
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 3.6e-152 542.3 513 55.2
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 3.6e-152 542.3 562 51.8
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 8.1e-152 541.2 496 58.9
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 3.1e-151 539.3 516 55.0
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 4.0e-151 538.9 506 54.7
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 5.3e-151 538.5 507 54.6
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 5.3e-151 538.5 507 54.6
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 5.3e-151 538.5 517 54.0
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 2.6e-150 536.2 513 55.6
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 3.4e-150 535.8 514 55.1
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 1.7e-149 533.5 507 54.2
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 1.7e-149 533.5 484 56.8
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.9e-149 532.7 507 54.0
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 2.9e-149 532.7 519 53.4
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 3.8e-149 532.3 537 52.5
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 3.8e-149 532.3 525 54.3
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 3.8e-149 532.3 514 53.9
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 4.9e-149 531.9 507 56.0
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.4e-148 530.4 507 53.6
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 3.5e-147 525.8 506 54.0
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 4.6e-147 525.4 515 53.8
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 1.1e-145 520.8 399 65.9
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 9.6e-145 517.7 587 49.4
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 1.3e-144 517.3 479 55.7
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 8.1e-144 514.6 514 53.5
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 1.2e-142 510.8 509 54.2
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 1.6e-139 500.4 535 50.8
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 1.6e-139 500.4 512 52.3
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 2.3e-138 496.5 519 50.3
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 2.3e-138 496.5 492 54.3
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 3.0e-138 496.1 517 50.1
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 1.1e-137 494.2 550 50.5
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 6.2e-136 488.4 542 47.8
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 1.5e-134 483.8 529 48.6
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 4.5e-134 482.3 535 48.0
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 4.9e-133 478.8 533 47.8
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 1.9e-132 476.9 525 48.2
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 1.9e-132 476.9 525 48.2
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 4.2e-132 475.7 525 48.0
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 4.2e-132 475.7 364 65.1
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 2.1e-131 473.4 523 47.8
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 7.9e-131 471.5 523 47.6
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 3.0e-130 469.5 569 44.5
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 7.7e-126 454.9 462 51.3
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.2e-123 447.6 401 58.4
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 3.6e-123 446.0 456 51.5
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 4.5e-118 429.1 353 61.5
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 5.1e-114 415.6 491 49.9
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 4.4e-105 386.0 380 54.2
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.7e-104 384.0 444 50.7
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 2.7e-99 366.7 264 68.9
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 5.2e-98 362.5 501 43.5
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 5.0e-93 345.9 463 45.8
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 4.2e-92 342.8 244 71.7
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 2.2e-88 330.5 498 40.4
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 9.1e-87 325.1 508 38.8
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 2.3e-82 310.5 264 59.1
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 4.0e-74 283.1 560 34.1
CDE04G1283 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 9.2e-71 271.9 245 58.0
Cpa.g.sc15.20 Carica papaya HOM05D005847 ORTHO05D007143 8.3e-64 248.8 204 59.8
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 6.2e-59 232.6 234 50.9
Nn1g00324 Nelumbo nucifera HOM05D005847 ORTHO05D007143 8.1e-59 232.3 223 56.1
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 5.8e-57 226.1 201 54.7
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 1.9e-55 221.1 416 36.8
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 2.4e-55 220.7 247 47.4
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 8.6e-53 212.2 259 43.6
SEGI_09534 Sequoiadendron giganteum HOM05D005847 ORTHO05D007143 6.9e-42 176.0 161 52.8
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.9e-39 167.9 443 27.5
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 1.2e-38 165.2 229 41.5
Aqoxy5G04303 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 6.0e-38 162.9 220 44.1
CDE04G2319 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 1.1e-34 152.1 178 43.8
Cpa.g.c33268 Carica papaya HOM05D005847 ORTHO05D007143 3.2e-31 140.6 146 54.1
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 3.3e-28 130.6 320 31.9
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 4.3e-28 130.2 225 39.1
Cpa.g.sc15.22 Carica papaya HOM05D005847 ORTHO05D007143 4.0e-26 123.6 82 69.5
AUR62019891 Chenopodium quinoa HOM05D005847 ORTHO05D007143 2.2e-24 117.9 102 54.9
RcHm_v2.0_Chr7g0205551 Rosa chinensis HOM05D005847 ORTHO05D007143 1.8e-21 108.2 224 35.7
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 2.3e-21 107.8 503 24.3
Atru.chr1.1468 Acer truncatum HOM05D005847 ORTHO05D007143 8.2e-19 99.4 97 50.5
Os10g0520950 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 9.0e-18 95.9 121 44.6
Nn1g00325 Nelumbo nucifera HOM05D005847 ORTHO05D007143 3.8e-16 90.5 93 49.5
QL02p028460 Quercus lobata HOM05D005847 ORTHO05D007143 1.5e-12 78.6 126 37.3
Cre05.g237600 Chlamydomonas reinhardtii HOM05D005847 ORTHO05D007143 1.6e-11 75.1 126 35.7
Lj3g0011757 Lotus japonicus HOM05D005847 ORTHO05D007143 6.3e-11 73.2 188 33.5
Medtr8g040720 Medicago truncatula HOM05D005847 ORTHO05D007143 6.3e-11 73.2 53 54.7


User provided reference genes

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