Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20358 Utricularia gibba HOM05D000792 ORTHO05D001021 5.1e-78 294.3 141 100.0
unitig_744.g24443 Utricularia gibba HOM05D000792 ORTHO05D001021 9.0e-51 203.8 128 75.8
SalBow6G3490 Salvia bowleyana HOM05D000792 ORTHO05D001021 2.9e-25 119.0 135 50.4
Migut.A00937 Erythranthe guttata HOM05D000792 ORTHO05D001021 3.2e-24 115.5 139 47.5
SGA_v2.0_scaffold286G47081 Striga asiatica HOM05D000792 ORTHO05D001021 1.0e-22 110.5 157 43.9
MSTRG.25584 Avicennia marina HOM05D000792 ORTHO05D001021 1.8e-22 109.8 130 47.7
Oeu039467.1 Olea europaea HOM05D000792 ORTHO05D001021 4.1e-19 98.6 133 44.4
Oeu062743.1 Olea europaea HOM05D000792 ORTHO05D001021 1.5e-18 96.7 131 40.5
Oeu062742.1 Olea europaea HOM05D000792 ORTHO05D001021 3.4e-18 95.5 123 41.5
Lj9A673G36 Lonicera japonica HOM05D000792 ORTHO05D001021 7.7e-18 94.4 129 41.9
QL03p000745 Quercus lobata HOM05D000792 ORTHO05D001021 1.3e-17 93.6 123 44.7
Cc02_g31160 Coffea canephora HOM05D000792 ORTHO05D001021 2.2e-17 92.8 129 39.5
Nitab4.5_0003397g0020 Nicotiana tabacum HOM05D000792 ORTHO05D001021 2.9e-17 92.4 134 39.6
Nitab4.5_0006443g0020 Nicotiana tabacum HOM05D000792 ORTHO05D001021 2.9e-17 92.4 127 43.3
Nitab4.5_0000653g0140 Nicotiana tabacum HOM05D000792 ORTHO05D001021 8.5e-17 90.9 126 43.7
QL03p000062 Quercus lobata HOM05D000792 ORTHO05D001021 8.5e-17 90.9 123 40.7
Haze_04305 Corylus avellana HOM05D000792 ORTHO05D001021 1.9e-16 89.7 115 41.7
Nitab4.5_0000245g0020 Nicotiana tabacum HOM05D000792 ORTHO05D001021 1.9e-16 89.7 127 42.5
Cfa006484 Carpinus fangiana HOM05D000792 ORTHO05D001021 4.2e-16 88.6 115 40.9
Prupe.6G336800 Prunus persica HOM05D000792 ORTHO05D001021 7.2e-16 87.8 128 42.2
Eucgr.H04409 Eucalyptus grandis HOM05D000792 ORTHO05D001021 9.4e-16 87.4 131 40.5
Rhsim05G0148600 Rhododendron simsii HOM05D000792 ORTHO05D001021 9.4e-16 87.4 126 42.1
Lj7A480G31 Lonicera japonica HOM05D000792 ORTHO05D001021 1.2e-15 87.0 119 41.2
Actinidia33835 Actinidia chinensis HOM05D000792 ORTHO05D001021 1.6e-15 86.7 123 43.1
QL03p000090 Quercus lobata HOM05D000792 ORTHO05D001021 4.7e-15 85.1 126 39.7
Cc00_g33700 Coffea canephora HOM05D000792 ORTHO05D001021 7.9e-15 84.3 134 39.6
Cc02_g31250 Coffea canephora HOM05D000792 ORTHO05D001021 7.9e-15 84.3 134 39.6
ECA240G0808 Erigeron canadensis HOM05D000792 ORTHO05D001021 1.8e-14 83.2 125 36.8
ECA240G3802 Erigeron canadensis HOM05D000792 ORTHO05D001021 1.8e-14 83.2 123 38.2
HanXRQChr15g0463101 Helianthus annuus HOM05D000792 ORTHO05D001021 1.8e-14 83.2 110 43.6
Lsat_1_v5_gn_6_79500 Lactuca sativa HOM05D000792 ORTHO05D001021 1.8e-14 83.2 95 45.3
CAN.G134.196 Capsicum annuum HOM05D000792 ORTHO05D001021 2.3e-14 82.8 70 51.4
RcHm_v2.0_Chr3g0452581 Rosa chinensis HOM05D000792 ORTHO05D001021 6.7e-14 81.3 123 39.8
CSS0005362 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D001021 1.1e-13 80.5 67 56.7
CSS0030690 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D001021 1.1e-13 80.5 67 56.7
Peaxi162Scf00225g00032 Petunia axillaris HOM05D000792 ORTHO05D001021 1.5e-13 80.1 106 44.3
CANSAT54G2845 Cannabis sativa HOM05D000792 ORTHO05D001021 2.0e-13 79.7 128 37.5
ClCG02G016320 Citrullus lanatus HOM05D000792 ORTHO05D001021 2.0e-13 79.7 59 59.3
FAN02G2161 Fragaria x ananassa HOM05D000792 ORTHO05D001021 2.6e-13 79.3 118 41.5
Lsat_1_v5_gn_2_64821 Lactuca sativa HOM05D000792 ORTHO05D001021 3.3e-13 79.0 116 42.2
vmacro19667 Vaccinium macrocarpon HOM05D000792 ORTHO05D001021 4.4e-13 78.6 127 41.7
Sopen01g041680 Solanum pennellii HOM05D000792 ORTHO05D001021 5.7e-13 78.2 98 43.9
FvH4_6g04000 Fragaria vesca HOM05D000792 ORTHO05D001021 7.4e-13 77.8 118 40.7
FAN14G0951 Fragaria x ananassa HOM05D000792 ORTHO05D004195 7.4e-13 77.8 118 40.7
DCAR_029740 Daucus carota HOM05D000792 ORTHO05D001021 9.7e-13 77.4 122 37.7
Sabra05G0042500 Salix brachista HOM05D000792 ORTHO05D001021 9.7e-13 77.4 151 37.7
Solyc01g098110.4 Solanum lycopersicum HOM05D000792 ORTHO05D001021 9.7e-13 77.4 86 45.3
TAR362G0178 Trochodendron aralioides HOM05D000792 ORTHO05D001021 9.7e-13 77.4 47 63.8
Gohir.D08G230866 Gossypium hirsutum HOM05D000792 ORTHO05D001021 1.3e-12 77.0 49 63.3
Oeu038577.1 Olea europaea HOM05D000792 ORTHO05D001021 1.3e-12 77.0 56 58.9
PGR004G1622 Punica granatum HOM05D000792 ORTHO05D001021 1.3e-12 77.0 50 60.0
PGR004G2499 Punica granatum HOM05D000792 ORTHO05D001021 1.3e-12 77.0 50 58.0
FAN05G0287 Fragaria x ananassa HOM05D000792 ORTHO05D004195 2.2e-12 76.3 114 42.1
FAN05G4001 Fragaria x ananassa HOM05D000792 ORTHO05D001021 2.2e-12 76.3 114 42.1
FAN09G2107 Fragaria x ananassa HOM05D000792 ORTHO05D004195 2.2e-12 76.3 118 39.8
Gohir.D02G211400 Gossypium hirsutum HOM05D000792 ORTHO05D001021 2.2e-12 76.3 123 34.1
Gorai.005G239300 Gossypium raimondii HOM05D000792 ORTHO05D001021 2.2e-12 76.3 123 34.1
Nn4g26004 Nelumbo nucifera HOM05D000792 ORTHO05D001021 2.2e-12 76.3 50 60.0
Aa31LG2G12190 Aethionema arabicum HOM05D000792 ORTHO05D001021 2.8e-12 75.9 96 38.5
CARHR055640 Cardamine hirsuta HOM05D000792 ORTHO05D001021 3.7e-12 75.5 103 36.9
MELO3C004352.2 Cucumis melo HOM05D000792 ORTHO05D001021 3.7e-12 75.5 59 55.9
Gohir.A03G190500 Gossypium hirsutum HOM05D000792 ORTHO05D001021 3.7e-12 75.5 102 38.2
Gohir.A08G213800 Gossypium hirsutum HOM05D000792 ORTHO05D001021 3.7e-12 75.5 90 45.6
Gorai.004G245200 Gossypium raimondii HOM05D000792 ORTHO05D001021 3.7e-12 75.5 49 61.2
Hma1.2p1_0332F.1_g127910 Hydrangea macrophylla HOM05D000792 ORTHO05D001021 3.7e-12 75.5 130 39.2
MD04G1216900 Malus domestica HOM05D000792 ORTHO05D001021 3.7e-12 75.5 64 53.1
MD12G1233500 Malus domestica HOM05D000792 ORTHO05D001021 3.7e-12 75.5 122 34.4
Potri.005G046600 Populus trichocarpa HOM05D000792 ORTHO05D001021 3.7e-12 75.5 53 58.5
Thecc.05G291800 Theobroma cacao HOM05D000792 ORTHO05D001021 3.7e-12 75.5 94 43.6
Duzib177G1082 Durio zibethinus HOM05D000792 ORTHO05D001021 6.3e-12 74.7 127 38.6
FvH4_6g03990 Fragaria vesca HOM05D000792 ORTHO05D001021 6.3e-12 74.7 118 39.8
PSO210G7161 Papaver somniferum HOM05D000792 ORTHO05D001021 6.3e-12 74.7 114 36.0
Aqoxy6G02449 Aquilegia oxysepala HOM05D000792 ORTHO05D001021 8.2e-12 74.3 133 36.8
HanXRQChr13g0414171 Helianthus annuus HOM05D000792 ORTHO05D001021 8.2e-12 74.3 50 60.0
Sabra13G0032800 Salix brachista HOM05D000792 ORTHO05D001021 8.2e-12 74.3 47 63.8
Sabra13G0032900 Salix brachista HOM05D000792 ORTHO05D001021 8.2e-12 74.3 76 48.7
AUR62000947 Chenopodium quinoa HOM05D000792 ORTHO05D001021 1.4e-11 73.6 58 53.4
Duzib106G1171 Durio zibethinus HOM05D000792 ORTHO05D001021 1.4e-11 73.6 123 38.2
ECA240G0999 Erigeron canadensis HOM05D000792 ORTHO05D001021 1.4e-11 73.6 107 40.2
HanXRQChr03g0083991 Helianthus annuus HOM05D000792 ORTHO05D001021 1.4e-11 73.6 47 59.6
Manes.09G158200 Manihot esculenta HOM05D000792 ORTHO05D001021 1.4e-11 73.6 61 54.1
PSO170G5137 Papaver somniferum HOM05D000792 ORTHO05D001021 1.4e-11 73.6 114 36.0
Potri.005G046700 Populus trichocarpa HOM05D000792 ORTHO05D001021 1.4e-11 73.6 149 37.6
Dinv03361 Davidia involucrata HOM05D000792 ORTHO05D001021 1.8e-11 73.2 126 37.3
Peaxi162Scf00558g00319 Petunia axillaris HOM05D000256 ORTHO05D000119 1.8e-11 73.2 65 55.4
Peaxi162Scf00608g00922 Petunia axillaris HOM05D004643 ORTHO05D005535 1.8e-11 73.2 49 65.3
Potri.013G033300 Populus trichocarpa HOM05D000792 ORTHO05D001021 1.8e-11 73.2 53 58.5
AUR62005022 Chenopodium quinoa HOM05D000792 ORTHO05D001021 3.1e-11 72.4 58 51.7
Dinv17747 Davidia involucrata HOM05D000792 ORTHO05D001021 3.1e-11 72.4 49 59.2
AT1G54570 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 4.1e-11 72.0 116 33.6
Hma1.2p1_0332F.1_g127900 Hydrangea macrophylla HOM05D000792 ORTHO05D001021 4.1e-11 72.0 130 37.7
Lj7A480T38 Lonicera japonica HOM05D000792 ORTHO05D001021 4.1e-11 72.0 131 39.7
Phvul.006G097700 Phaseolus vulgaris HOM05D000792 ORTHO05D001021 4.1e-11 72.0 75 44.0
Potri.013G033600 Populus trichocarpa HOM05D000792 ORTHO05D001021 4.1e-11 72.0 53 58.5
Cpa.g.sc117.36 Carica papaya HOM05D000792 ORTHO05D001021 5.3e-11 71.6 100 40.0
Ciclev10000378m.g Citrus clementina HOM05D000792 ORTHO05D001021 5.3e-11 71.6 49 59.2
Glyma.19G241200 Glycine max HOM05D000792 ORTHO05D001021 5.3e-11 71.6 64 48.4
Sed0005337 Sechium edule HOM05D000792 ORTHO05D001021 5.3e-11 71.6 77 49.4
Atru.chr2.688 Acer truncatum HOM05D000792 ORTHO05D001021 7.0e-11 71.2 47 57.4
Cc02_g31120 Coffea canephora HOM05D000792 ORTHO05D001021 7.0e-11 71.2 49 57.1
QL03p000546 Quercus lobata HOM05D000792 ORTHO05D001021 7.0e-11 71.2 47 59.6
Atru.chr2.652 Acer truncatum HOM05D000792 ORTHO05D001021 9.1e-11 70.9 60 53.3
Atru.chr2.671 Acer truncatum HOM05D000792 ORTHO05D001021 9.1e-11 70.9 60 53.3
AL1G65000 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 9.1e-11 70.9 68 44.1
Ca_09395_v3 Cicer arietinum L. HOM05D000792 ORTHO05D001021 9.1e-11 70.9 124 34.7
Nn3g21315 Nelumbo nucifera HOM05D000792 ORTHO05D001021 9.1e-11 70.9 58 51.7
Sabra05G0042700 Salix brachista HOM05D000792 ORTHO05D001021 9.1e-11 70.9 97 41.2
TWI56G1259 Tripterygium wilfordii HOM05D000792 ORTHO05D001021 9.1e-11 70.9 96 41.7
TAR365G0732 Trochodendron aralioides HOM05D000792 ORTHO05D001021 9.1e-11 70.9 129 34.1
VMungo0540G2137 Vigna mungo HOM05D000792 ORTHO05D001021 9.1e-11 70.9 56 50.0
Aqoxy6G02450 Aquilegia oxysepala HOM05D000792 ORTHO05D001021 1.2e-10 70.5 88 44.3
BcaC04g22020 Brassica carinata HOM05D000792 ORTHO05D001021 1.2e-10 70.5 96 38.5
C09p24550 Brassica napus HOM05D000792 ORTHO05D001021 1.2e-10 70.5 96 38.5
BolC9t55369H Brassica oleracea HOM05D000792 ORTHO05D001021 1.2e-10 70.5 96 38.5
BraA09t37562Z Brassica rapa HOM05D000792 ORTHO05D001021 1.2e-10 70.5 96 38.5
arahy.Tifrunner.gnm1.ann1.WN738C Arachis hypogaea HOM05D000792 ORTHO05D001021 1.6e-10 70.1 109 36.7
ECA238G2767 Erigeron canadensis HOM05D000792 ORTHO05D001021 1.6e-10 70.1 114 38.6
Glyma.03G243700 Glycine max HOM05D000792 ORTHO05D001021 1.6e-10 70.1 49 57.1
PSO017G6435 Papaver somniferum HOM05D000792 ORTHO05D001021 1.6e-10 70.1 59 49.2
Potri.013G033000 Populus trichocarpa HOM05D000792 ORTHO05D001021 1.6e-10 70.1 60 53.3
EL10Ac4g09221 Beta vulgaris HOM05D000792 ORTHO05D001021 2.0e-10 69.7 54 50.0
A09p19470 Brassica napus HOM05D000792 ORTHO05D001021 2.0e-10 69.7 96 38.5
Lj1g0023180 Lotus japonicus HOM05D000792 ORTHO05D001021 2.0e-10 69.7 75 46.7
Manes.09G158301 Manihot esculenta HOM05D000792 ORTHO05D001021 2.0e-10 69.7 53 56.6
CsaV3_2G004420 Cucumis sativus L. HOM05D000792 ORTHO05D001021 2.6e-10 69.3 106 38.7
Hund07002 Selenicereus undatus HOM05D000792 ORTHO05D001021 2.6e-10 69.3 69 46.4
BcaB07g31095 Brassica carinata HOM05D000792 ORTHO05D001021 3.5e-10 68.9 85 38.8
COL.COLO4_13632 Corchorus olitorius HOM05D000792 ORTHO05D001021 3.5e-10 68.9 124 32.3
Ah.06g192820 Amaranthus hybridus HOM05D000792 ORTHO05D001021 4.5e-10 68.6 49 53.1
ECA233G0021 Erigeron canadensis HOM05D000792 ORTHO05D001021 5.9e-10 68.2 80 45.0
Psat3g008800 Pisum sativum HOM05D000792 ORTHO05D001021 5.9e-10 68.2 112 36.6
arahy.Tifrunner.gnm1.ann1.J5KI3B Arachis hypogaea HOM05D000792 ORTHO05D001021 1.0e-09 67.4 109 33.9
EL10Ac4g09220 Beta vulgaris HOM05D000792 ORTHO05D001021 1.0e-09 67.4 54 48.1
Carub.0002s0906 Capsella rubella HOM05D000792 ORTHO05D001021 1.0e-09 67.4 115 33.9
HanXRQChr13g0414151 Helianthus annuus HOM05D000792 ORTHO05D001021 1.0e-09 67.4 111 36.9
TPR.G6928 Trifolium pratense HOM05D000792 ORTHO05D001021 1.0e-09 67.4 92 41.3
Aqoxy2G03102 Aquilegia oxysepala HOM05D000792 ORTHO05D001021 1.3e-09 67.0 78 42.3
SpUn0001_0150 Schrenkiella parvula HOM05D000792 ORTHO05D001021 1.3e-09 67.0 101 36.6
CDE02G3301 Ceratophyllum demersum HOM05D000792 ORTHO05D001021 2.2e-09 66.2 48 50.0
Thhalv10023311m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 2.2e-09 66.2 55 45.5
CSS0026682 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D015296 3.8e-09 65.5 42 61.9
Sed0009921 Sechium edule HOM05D000792 ORTHO05D001021 3.8e-09 65.5 63 49.2
Zm00001eb131690 Zea mays HOM05D000792 ORTHO05D001021 3.8e-09 65.5 115 32.2
Medtr7g114340 Medicago truncatula HOM05D000792 ORTHO05D001021 5.0e-09 65.1 47 53.2
THA.LOC104808245 Tarenaya hassleriana HOM05D000792 ORTHO05D001021 5.0e-09 65.1 124 35.5
Eucgr.H04410 Eucalyptus grandis HOM05D000792 ORTHO05D001021 6.5e-09 64.7 72 44.4
Lsat_1_v5_gn_5_72180 Lactuca sativa HOM05D000207 ORTHO05D000606 8.5e-09 64.3 52 57.7
Lalb_Chr15g0076971 Lupinus albus HOM05D000792 ORTHO05D001021 8.5e-09 64.3 50 52.0
CDE08G0589 Ceratophyllum demersum HOM05D000792 ORTHO05D001021 1.5e-08 63.5 59 47.5
Lalb_Chr18g0045261 Lupinus albus HOM05D000792 ORTHO05D001021 1.5e-08 63.5 107 36.4
HanXRQChr08g0235961 Helianthus annuus HOM05D000792 ORTHO05D001021 3.2e-08 62.4 52 50.0
SalBow1G5642 Salvia bowleyana HOM05D000792 ORTHO05D001021 3.2e-08 62.4 63 49.2
SalBow1G6792 Salvia bowleyana HOM05D000792 ORTHO05D001021 4.2e-08 62.0 54 50.0
Lalb_Chr18g0045251 Lupinus albus HOM05D000792 ORTHO05D001021 7.2e-08 61.2 50 54.0
MBI19_g30848_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D001021 7.2e-08 61.2 52 46.2
ECA240G0210 Erigeron canadensis HOM05D000792 ORTHO05D001021 9.4e-08 60.8 106 38.7
DCAR_014376 Daucus carota HOM05D000792 ORTHO05D001021 1.6e-07 60.1 68 42.6
Ciclev10014442m.g Citrus clementina HOM05D000792 ORTHO05D001021 4.7e-07 58.5 76 35.5
Ciclev10014452m.g Citrus clementina HOM05D000792 ORTHO05D001021 6.1e-07 58.2 92 34.8
ATR0706G253 Amborella trichopoda HOM05D000792 ORTHO05D001021 1.8e-06 56.6 79 39.2
HPP92_018397 Vanilla planifolia HOM05D000792 ORTHO05D001021 3.0e-06 55.8 45 51.1
PGR142G4037 Punica granatum HOM05D000792 ORTHO05D001021 8.8e-06 54.3 61 44.3


User provided reference genes

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