Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 4.5e-211 737.6 365 100.0
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 4.1e-156 555.1 373 72.9
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.5e-153 546.6 375 72.3
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 1.5e-153 546.6 366 73.8
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.0e-146 523.9 348 70.1
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 9.5e-145 517.3 348 70.7
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 8.0e-144 514.2 337 71.8
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.5e-142 510.0 357 71.4
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.5e-142 510.0 320 74.7
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.5e-142 510.0 320 74.7
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.6e-142 509.2 334 72.8
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 3.4e-142 508.8 366 69.1
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 4.4e-142 508.4 321 76.3
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.7e-141 506.5 362 69.1
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 2.9e-141 505.8 351 69.8
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 4.9e-141 505.0 331 73.7
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 9.2e-140 500.7 353 69.7
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 1.6e-139 500.0 322 73.6
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.6e-139 500.0 328 72.0
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 6.0e-139 498.0 326 72.7
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 5.1e-138 495.0 322 72.7
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 5.1e-138 495.0 350 68.3
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 6.6e-138 494.6 335 69.6
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 8.6e-138 494.2 350 69.1
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 8.6e-138 494.2 446 58.3
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 1.1e-137 493.8 320 74.4
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.9e-137 493.0 320 73.8
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 1.9e-137 493.0 338 69.2
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 3.3e-137 492.3 329 71.1
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 3.3e-137 492.3 320 73.1
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.3e-137 491.9 324 71.6
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 9.5e-137 490.7 320 72.8
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.2e-136 490.3 359 68.2
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-136 490.0 320 73.8
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 2.8e-136 489.2 338 67.8
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 3.6e-136 488.8 329 72.0
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 4.7e-136 488.4 336 69.3
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 4.7e-136 488.4 338 67.5
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.1e-135 487.3 365 64.7
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.1e-135 487.3 329 70.8
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 6.8e-135 484.6 347 68.9
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.5e-134 483.4 368 64.7
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 3.4e-134 482.3 361 64.3
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.4e-134 482.3 320 71.6
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 1.7e-133 479.9 336 68.5
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.7e-133 479.9 320 70.9
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.1e-132 477.2 330 70.3
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.1e-132 477.2 330 70.3
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 3.2e-132 475.7 338 68.6
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 4.1e-132 475.3 330 70.0
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 5.4e-132 474.9 370 64.9
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 9.2e-132 474.2 371 65.2
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 4.6e-131 471.9 336 68.2
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.7e-130 469.9 383 61.6
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 8.6e-130 467.6 362 63.0
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 4.3e-129 465.3 335 68.1
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.2e-126 457.2 339 64.3
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 8.1e-120 434.5 277 74.7
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 4.0e-119 432.2 328 64.9
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 2.6e-118 429.5 278 72.7
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.4e-116 423.7 331 65.3
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.8e-112 409.5 281 70.5
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.1e-111 407.5 328 62.2
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.8e-111 406.8 284 68.3
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 3.1e-111 406.0 280 70.0
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 4.0e-111 405.6 322 61.2
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.2e-109 399.8 377 56.8
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 5.4e-108 395.2 326 57.7
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 7.1e-108 394.8 279 67.0
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 2.5e-105 386.3 290 65.9
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.3e-104 384.0 267 69.7
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.1e-99 366.7 330 51.8
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.1e-87 327.8 335 54.0
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 5.0e-85 318.9 338 51.8
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 1.6e-83 313.9 347 47.8
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 5.1e-82 308.9 209 71.3
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 6.7e-82 308.5 278 56.8
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.0e-78 297.0 325 46.5
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 6.5e-77 292.0 320 49.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 3.7e-72 276.2 184 70.7
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.4e-71 274.2 205 62.4
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.2e-70 271.2 228 60.5
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.0e-69 268.1 176 72.2
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 2.2e-69 266.9 395 40.5
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 3.6e-67 259.6 193 64.2
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.3e-66 256.9 211 61.1
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.2e-60 236.1 225 51.6
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.8e-58 230.7 250 48.4
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.6e-57 226.9 258 49.6
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 2.2e-56 223.8 244 50.8
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.4e-55 220.3 343 36.7
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 7.2e-52 208.8 305 38.0
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 7.2e-52 208.8 305 37.7
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 4.0e-50 203.0 304 38.5
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 5.4e-47 192.6 321 34.9
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 2.3e-45 187.2 308 35.7
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 6.6e-45 185.7 354 34.2
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 8.0e-43 178.7 141 63.1
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 8.0e-43 178.7 323 32.8
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 2.3e-42 177.2 120 70.0
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.0e-42 176.4 312 35.6
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 4.6e-38 162.9 92 84.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.7e-37 161.0 97 73.2
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 2.3e-37 160.6 204 44.1
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 6.8e-34 149.1 138 55.8
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 1.2e-33 148.3 102 65.7
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 9.2e-31 138.7 142 54.2
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 6.0e-30 136.0 121 57.9
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.3e-29 134.8 180 42.2
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 1.6e-19 101.3 86 59.3
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.2e-17 95.1 243 27.2
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.3e-16 91.7 54 79.6
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 6.4e-16 89.4 54 77.8
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 4.3e-12 76.6 246 26.8
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 4.3e-12 76.6 248 26.2
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 5.6e-12 76.3 234 23.9
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 7.3e-12 75.9 53 67.9
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 9.6e-12 75.5 238 25.6
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.4e-10 71.6 186 28.0
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.0e-10 70.1 53 62.3
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 4.0e-10 70.1 56 62.5
Cc11_g15440 Coffea canephora HOM05D005748 ORTHO05D007123 7.6e-09 65.9 131 31.3
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 4.9e-08 63.2 43 55.8
PSO478G3396 Papaver somniferum HOM05D005748 ORTHO05D007123 7.1e-07 59.3 117 34.2
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 1.6e-06 58.2 114 30.7
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 4.6e-06 56.6 172 29.1
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 4.6e-06 56.6 153 25.5
PSO017G4278 Papaver somniferum HOM05D005748 ORTHO05D007123 4.6e-06 56.6 117 33.3
SGA_v2.0_scaffold50G18425 Striga asiatica HOM05D005748 ORTHO05D007123 4.6e-06 56.6 132 28.8


User provided reference genes

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