Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 1.8e-212 742.3 371 100.0
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 2.0e-94 350.1 319 60.5
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 2.7e-94 349.7 334 58.4
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 6.6e-93 345.1 384 50.3
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 2.5e-92 343.2 326 57.7
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 2.0e-89 333.6 332 53.6
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 3.4e-89 332.8 392 48.0
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 4.4e-89 332.4 355 49.0
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 6.4e-88 328.6 391 48.8
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 1.9e-87 327.0 328 53.4
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 5.4e-87 325.5 308 55.8
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 1.2e-86 324.3 352 50.3
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 2.0e-86 323.6 332 52.4
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 6.0e-86 322.0 357 50.7
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 1.3e-85 320.9 358 50.8
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 1.7e-85 320.5 332 51.8
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 3.9e-85 319.3 332 50.9
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 5.0e-85 318.9 361 50.4
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 6.6e-85 318.5 352 50.3
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 1.1e-84 317.8 341 52.2
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 1.1e-84 317.8 361 50.1
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 1.9e-84 317.0 321 56.4
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 3.3e-84 316.2 332 50.9
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 3.3e-84 316.2 361 50.1
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 7.3e-84 315.1 332 51.2
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 1.2e-83 314.3 368 48.4
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.6e-83 313.9 332 50.6
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 2.1e-83 313.5 321 51.1
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 2.8e-83 313.2 332 51.2
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 4.7e-83 312.4 327 50.5
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 4.7e-83 312.4 342 50.3
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 6.2e-83 312.0 351 51.0
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.4e-82 310.8 332 50.3
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 4.0e-82 309.3 324 53.4
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 6.8e-82 308.5 327 51.7
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 1.2e-81 307.8 327 52.0
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 2.0e-81 307.0 322 51.9
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 3.4e-81 306.2 332 50.0
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 3.4e-81 306.2 335 48.1
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 3.4e-81 306.2 310 54.5
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 5.8e-81 305.4 321 51.7
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 1.3e-80 304.3 327 50.5
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 1.1e-79 301.2 332 49.7
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 1.4e-79 300.8 326 50.0
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 1.4e-79 300.8 393 47.6
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 1.9e-79 300.4 312 53.2
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 3.2e-79 299.7 326 50.6
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 4.1e-79 299.3 337 51.3
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 4.1e-79 299.3 337 51.3
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 7.1e-79 298.5 363 46.6
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 7.1e-79 298.5 320 50.0
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 9.2e-79 298.1 336 48.5
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 1.2e-78 297.7 325 49.2
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 1.2e-78 297.7 327 47.7
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 3.5e-78 296.2 297 52.5
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 6.0e-78 295.4 337 50.4
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 6.0e-78 295.4 337 50.4
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 7.8e-78 295.0 334 49.4
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 7.8e-78 295.0 309 51.8
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 1.0e-77 294.7 334 49.7
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 1.0e-77 294.7 312 51.9
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 1.3e-77 294.3 340 46.8
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 3.9e-77 292.7 308 49.4
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 3.9e-77 292.7 334 48.8
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 3.9e-77 292.7 312 50.6
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 6.6e-77 292.0 310 52.3
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 3.3e-76 289.7 355 47.3
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 3.3e-76 289.7 295 51.9
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 3.3e-76 289.7 295 52.5
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 3.3e-76 289.7 354 47.2
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 5.6e-76 288.9 365 46.3
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 5.6e-76 288.9 312 51.3
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 1.2e-75 287.7 295 52.9
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 2.1e-75 287.0 332 47.9
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 4.0e-74 282.7 295 51.5
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 6.8e-74 282.0 352 46.6
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 1.2e-73 281.2 317 48.9
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 2.0e-73 280.4 325 47.7
Gohir.A10G046300 Gossypium hirsutum HOM05D006462 ORTHO05D008067 2.0e-73 280.4 252 57.1
Gohir.D10G047600 Gossypium hirsutum HOM05D006462 ORTHO05D008067 2.9e-72 276.6 252 56.3
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 1.1e-71 274.6 370 45.4
Thecc.06G136400 Theobroma cacao HOM05D006462 ORTHO05D008067 2.1e-70 270.4 252 55.6
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 2.7e-70 270.0 362 42.5
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 3.5e-70 269.6 366 44.8
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 8.6e-69 265.0 326 47.2
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.1e-68 264.6 310 46.1
Zm00001eb032640 Zea mays HOM05D006462 ORTHO05D008067 9.6e-68 261.5 251 53.8
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 6.9e-66 255.4 315 45.1
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 5.8e-65 252.3 311 46.0
MBI18_g37401_MAGBIO Magnolia biondii HOM05D006462 ORTHO05D008067 2.9e-64 250.0 238 50.4
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 3.3e-60 236.5 323 45.2
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 5.6e-60 235.7 324 40.7
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 7.3e-60 235.3 250 50.8
Manes.16G054132 Manihot esculenta HOM05D006462 ORTHO05D008067 1.3e-59 234.6 242 52.1
Prupe.4G106200 Prunus persica HOM05D006462 ORTHO05D008067 1.3e-59 234.6 296 43.9
RcHm_v2.0_Chr5g0019331 Rosa chinensis HOM05D006462 ORTHO05D008067 3.6e-59 233.0 223 51.1
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 8.4e-56 221.9 251 46.2
Sed0017395 Sechium edule HOM05D006462 ORTHO05D008067 1.1e-52 211.5 213 51.6
AUR62034022 Chenopodium quinoa HOM05D006462 ORTHO05D008067 3.1e-50 203.4 221 49.3
Nitab4.5_0011847g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 2.5e-44 183.7 184 54.3
Lj2A355T38 Lonicera japonica HOM05D006462 ORTHO05D008067 6.5e-40 169.1 154 57.1
CBR_g32011 Chara braunii HOM05D006462 ORTHO05D008067 3.2e-39 166.8 345 31.3
SMO358G0034 Selaginella moellendorffii HOM05D006462 ORTHO05D008067 1.3e-37 161.4 214 43.9
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 2.1e-35 154.1 366 31.4
Nitab4.5_0011847g0040 Nicotiana tabacum HOM05D006462 ORTHO05D008067 7.2e-31 139.0 139 53.2
MD15G1410000 Malus domestica HOM05D006462 ORTHO05D008067 4.8e-27 126.3 115 53.9
Lj2A355G32 Lonicera japonica HOM05D006462 ORTHO05D008067 1.7e-24 117.9 128 50.8
SEGI_02488 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 2.9e-24 117.1 141 46.8
CSS0042902 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.1e-23 115.2 113 55.8
CSS0015214 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.4e-21 108.2 100 58.0
RcHm_v2.0_Chr5g0019341 Rosa chinensis HOM05D006462 ORTHO05D008067 4.4e-20 103.2 94 57.4
Gohir.A10G086200 Gossypium hirsutum HOM05D006462 ORTHO05D008067 2.1e-14 84.3 71 54.9
Oeu052694.1 Olea europaea HOM05D006462 ORTHO05D008067 2.7e-14 84.0 123 45.5
Cre06.g288800 Chlamydomonas reinhardtii HOM05D006462 ORTHO05D008067 1.0e-13 82.0 119 32.8
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 3.3e-12 77.0 223 27.8
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 4.8e-11 73.2 242 26.4
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 4.8e-11 73.2 290 25.9
MD10G1237800 Malus domestica HOM05D006462 ORTHO05D008067 1.1e-10 72.0 82 43.9
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 1.4e-10 71.6 224 27.2
SEGI_23737 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 1.4e-10 71.6 99 42.4
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 1.8e-10 71.2 215 27.0
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 1.8e-10 71.2 225 25.3
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 2.4e-10 70.9 215 27.0
SEGI_41218 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 5.3e-10 69.7 95 40.0
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 7.0e-10 69.3 224 26.8
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 7.0e-10 69.3 224 26.8
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 7.0e-10 69.3 191 27.7
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 2.6e-09 67.4 127 31.5
C09p27540 Brassica napus HOM05D006462 ORTHO05D008067 1.5e-07 61.6 83 41.0
arahy.Tifrunner.gnm1.ann1.CQ0UNW Arachis hypogaea HOM05D000112 ORTHO05D008067 1.9e-07 61.2 102 38.2


User provided reference genes

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