Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20035 Utricularia gibba HOM05D002255 ORTHO05D002288 2.3e-94 349.4 245 100.0
Oeu022736.1 Olea europaea HOM05D002255 ORTHO05D002288 6.6e-09 65.5 38 84.2
PGR042G3556 Punica granatum HOM05D002255 ORTHO05D002288 1.1e-08 64.7 45 68.9
Oeu064420.1 Olea europaea HOM05D002255 ORTHO05D002288 1.5e-08 64.3 44 72.7
Hma1.2p1_1697F.1_g298070 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 4.3e-08 62.8 41 73.2
Hma1.2p1_2008F.1_g310960 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 4.3e-08 62.8 41 73.2
Gohir.A08G034900 Gossypium hirsutum HOM05D002255 ORTHO05D002288 7.3e-08 62.0 41 70.7
Gohir.D08G045400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 7.3e-08 62.0 41 70.7
Gorai.004G044300 Gossypium raimondii HOM05D002255 ORTHO05D002288 7.3e-08 62.0 41 70.7
Ciclev10022281m.g Citrus clementina HOM05D002255 ORTHO05D002288 9.6e-08 61.6 45 64.4
THA.LOC104802095 Tarenaya hassleriana HOM05D002255 ORTHO05D002288 9.6e-08 61.6 40 70.0
arahy.Tifrunner.gnm1.ann1.I8323W Arachis hypogaea HOM05D002255 ORTHO05D002288 1.3e-07 61.2 42 69.0
arahy.Tifrunner.gnm1.ann1.WLQ804 Arachis hypogaea HOM05D002255 ORTHO05D002288 1.3e-07 61.2 42 69.0
PGSC0003DMG400011267 Solanum tuberosum HOM05D002255 ORTHO05D002288 1.3e-07 61.2 41 68.3
MBI12_g16192_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 1.6e-07 60.8 46 63.0
Haze_15727 Corylus avellana HOM05D002255 ORTHO05D002288 2.1e-07 60.5 38 73.7
Nitab4.5_0002053g0080 Nicotiana tabacum HOM05D002255 ORTHO05D002288 2.1e-07 60.5 41 68.3
Nitab4.5_0004249g0030 Nicotiana tabacum HOM05D002255 ORTHO05D002288 2.1e-07 60.5 41 68.3
CiPaw.01G082000 Carya illinoinensis HOM05D002255 ORTHO05D002288 2.8e-07 60.1 36 77.8
Duzib138G1476 Durio zibethinus HOM05D002255 ORTHO05D002288 2.8e-07 60.1 36 77.8
Lj1g0027887 Lotus japonicus HOM05D002255 ORTHO05D002288 2.8e-07 60.1 44 59.1
Solyc10g005020.3 Solanum lycopersicum HOM05D002255 ORTHO05D002288 2.8e-07 60.1 41 65.9
Sopen10g001030 Solanum pennellii HOM05D002255 ORTHO05D002288 2.8e-07 60.1 41 65.9
Thecc.01G334100 Theobroma cacao HOM05D002255 ORTHO05D002288 2.8e-07 60.1 36 77.8
AL5G44520 Arabidopsis lyrata HOM05D002255 ORTHO05D002288 3.6e-07 59.7 41 65.9
ClCG07G008260 Citrullus lanatus HOM05D002255 ORTHO05D002288 4.8e-07 59.3 49 59.2
Lj8P199T12 Lonicera japonica HOM05D002255 ORTHO05D002288 4.8e-07 59.3 42 64.3
Phvul.010G119100 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 4.8e-07 59.3 39 69.2
SalBow5G5501 Salvia bowleyana HOM05D002255 ORTHO05D002288 4.8e-07 59.3 42 66.7
Cfa003741 Carpinus fangiana HOM05D002255 ORTHO05D002288 6.2e-07 58.9 38 71.1
MELO3C016367.2 Cucumis melo HOM05D002255 ORTHO05D002288 6.2e-07 58.9 49 59.2
Duzib133G0281 Durio zibethinus HOM05D002255 ORTHO05D002288 6.2e-07 58.9 36 75.0
Gohir.A11G100600 Gossypium hirsutum HOM05D002255 ORTHO05D002288 6.2e-07 58.9 36 75.0
Gohir.D11G105300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 6.2e-07 58.9 36 75.0
Gorai.007G112600 Gossypium raimondii HOM05D002255 ORTHO05D002288 6.2e-07 58.9 36 75.0
Hma1.2p1_0456F.1_g156800 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 6.2e-07 58.9 41 68.3
Nn1g00427 Nelumbo nucifera HOM05D002255 ORTHO05D002288 6.2e-07 58.9 44 63.6
Psat4g163560 Pisum sativum HOM05D002255 ORTHO05D002288 6.2e-07 58.9 42 66.7
TPR.G7720 Trifolium pratense HOM05D002255 ORTHO05D002288 6.2e-07 58.9 37 73.0
CANSAT56G1904 Cannabis sativa HOM05D002255 ORTHO05D002288 8.1e-07 58.5 36 75.0
CANSAT56G3209 Cannabis sativa HOM05D002255 ORTHO05D002288 8.1e-07 58.5 36 75.0
COL.COLO4_06208 Corchorus olitorius HOM05D002255 ORTHO05D002288 8.1e-07 58.5 36 75.0
MD01G1088400 Malus domestica HOM05D002255 ORTHO05D002288 8.1e-07 58.5 36 75.0
Peaxi162Scf00313g00031 Petunia axillaris HOM05D002255 ORTHO05D002288 8.1e-07 58.5 41 65.9
Prupe.2G196900 Prunus persica HOM05D002255 ORTHO05D002288 8.1e-07 58.5 36 75.0
SEGI_25160 Sequoiadendron giganteum HOM05D002255 ORTHO05D002288 1.1e-06 58.2 46 54.3
MBI04_g15572_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 1.4e-06 57.8 38 68.4
AT3G61920 Arabidopsis thaliana HOM05D002255 ORTHO05D002288 1.8e-06 57.4 36 72.2
Carub.0005s2868 Capsella rubella HOM05D002255 ORTHO05D002288 1.8e-06 57.4 36 72.2
MD07G1158800 Malus domestica HOM05D002255 ORTHO05D002288 1.8e-06 57.4 36 72.2
Medtr1g099630 Medicago truncatula HOM05D002255 ORTHO05D002288 1.8e-06 57.4 50 54.0
QL08p047076 Quercus lobata HOM05D002255 ORTHO05D002288 1.8e-06 57.4 36 72.2
Sc23g0001820 Simmondsia chinensis HOM05D002255 ORTHO05D002288 1.8e-06 57.4 42 64.3
TWI14G0548 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 1.8e-06 57.4 36 72.2
TAR374G1498 Trochodendron aralioides HOM05D002255 ORTHO05D002288 1.8e-06 57.4 44 61.4
Atru.chr5.759 Acer truncatum HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
Ah.05g178990 Amaranthus hybridus HOM05D002255 ORTHO05D002288 2.4e-06 57.0 41 65.9
Thhalv10010753m.g Eutrema salsugineum HOM05D002255 ORTHO05D002288 2.4e-06 57.0 38 68.4
Glyma.07G050100 Glycine max HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
Glyma.16G018800 Glycine max HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
Lj3g0024476 Lotus japonicus HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
Medtr8g017100 Medicago truncatula HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
QL02p027560 Quercus lobata HOM05D002255 ORTHO05D002288 2.4e-06 57.0 45 57.8
TPR.G19840 Trifolium pratense HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
TAR375G0553 Trochodendron aralioides HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
VMungo0331G1755 Vigna mungo HOM05D002255 ORTHO05D002288 2.4e-06 57.0 36 72.2
ATR0078G028 Amborella trichopoda HOM05D002255 ORTHO05D002288 3.1e-06 56.6 38 65.8
BraA09t40813Z Brassica rapa HOM05D002255 ORTHO05D002288 3.1e-06 56.6 37 67.6
CDE12G0944 Ceratophyllum demersum HOM05D002255 ORTHO05D002288 3.1e-06 56.6 43 60.5
DCAR_006563 Daucus carota HOM05D002255 ORTHO05D002288 3.1e-06 56.6 44 61.4
Manes.01G240600 Manihot esculenta HOM05D002255 ORTHO05D002288 3.1e-06 56.6 36 69.4
Potri.002G178900 Populus trichocarpa HOM05D002255 ORTHO05D002288 3.1e-06 56.6 36 72.2
GSVIVG01027432001 Vitis vinifera HOM05D002255 ORTHO05D002288 3.1e-06 56.6 36 72.2
BcaC07g42619 Brassica carinata HOM05D002255 ORTHO05D002288 4.0e-06 56.2 42 59.5
AUR62022671 Chenopodium quinoa HOM05D002255 ORTHO05D002288 4.0e-06 56.2 41 65.9
RcHm_v2.0_Chr1g0361011 Rosa chinensis HOM05D002255 ORTHO05D002288 4.0e-06 56.2 38 71.1
SGA_v2.0_scaffold232G43529 Striga asiatica HOM05D002255 ORTHO05D002288 4.0e-06 56.2 45 57.8
BcaC07g40685 Brassica carinata HOM05D002255 ORTHO05D002288 5.3e-06 55.8 36 69.4
C08p36850 Brassica napus HOM05D002255 ORTHO05D002288 5.3e-06 55.8 36 69.4
BolC8t51264H Brassica oleracea HOM05D002255 ORTHO05D002288 5.3e-06 55.8 36 69.4
Cpa.g.sc141.2 Carica papaya HOM05D002255 ORTHO05D002288 5.3e-06 55.8 36 69.4
CiPaw.12G076300 Carya illinoinensis HOM05D002255 ORTHO05D002288 5.3e-06 55.8 38 65.8
Lalb_Chr10g0100851 Lupinus albus HOM05D002255 ORTHO05D002288 5.3e-06 55.8 36 69.4
Nn3g18858 Nelumbo nucifera HOM05D002255 ORTHO05D002288 5.3e-06 55.8 44 63.6
TPR.G7743 Trifolium pratense HOM05D002255 ORTHO05D002288 5.3e-06 55.8 44 59.1
GSVIVG01019671001 Vitis vinifera HOM05D002255 ORTHO05D002288 5.3e-06 55.8 49 53.1
BcaB07g31618 Brassica carinata HOM05D002255 ORTHO05D002288 6.9e-06 55.5 42 61.9
A09p53990 Brassica napus HOM05D002255 ORTHO05D002288 6.9e-06 55.5 37 64.9
CSS0018027 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 6.9e-06 55.5 38 68.4
CSS0032293 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 6.9e-06 55.5 38 68.4
Cc02_g39930 Coffea canephora HOM05D002255 ORTHO05D002288 6.9e-06 55.5 41 65.9
Psat6g195880 Pisum sativum HOM05D002255 ORTHO05D002288 6.9e-06 55.5 50 54.0
Rhsim02G0253400 Rhododendron simsii HOM05D002255 ORTHO05D002288 6.9e-06 55.5 49 53.1
CARHR172280 Cardamine hirsuta HOM05D002255 ORTHO05D002288 9.0e-06 55.1 36 69.4
CsaV3_4G005840 Cucumis sativus L. HOM05D002255 ORTHO05D002288 9.0e-06 55.1 49 57.1
Thecc.03G218700 Theobroma cacao HOM05D002255 ORTHO05D002288 9.0e-06 55.1 43 65.1


User provided reference genes

Program Settings