Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 1.1e-278 962.6 460 100.0
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 7.2e-190 667.5 405 77.5
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 9.4e-190 667.2 404 77.7
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 9.4e-190 667.2 384 79.9
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.2e-189 666.8 384 79.9
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 1.2e-189 666.8 388 79.9
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 1.6e-189 666.4 384 80.5
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 7.9e-189 664.1 387 78.6
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.4e-188 663.3 384 79.7
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 3.0e-188 662.1 404 75.5
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 2.0e-187 659.4 386 78.2
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 4.3e-187 658.3 384 78.9
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 4.3e-187 658.3 405 75.8
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 7.4e-187 657.5 404 75.5
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 2.2e-186 656.0 403 75.7
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 2.8e-186 655.6 402 75.6
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 2.8e-186 655.6 404 75.7
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 6.3e-186 654.4 404 75.2
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 1.8e-185 652.9 382 78.3
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 4.1e-185 651.7 388 77.8
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 5.3e-185 651.4 404 75.0
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 9.1e-185 650.6 405 74.1
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 9.1e-185 650.6 385 78.2
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 2.0e-184 649.4 387 76.5
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 3.4e-184 648.7 387 76.5
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 5.9e-184 647.9 405 73.1
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 7.7e-184 647.5 406 73.9
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 7.7e-184 647.5 399 74.9
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 1.0e-183 647.1 383 77.0
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 1.3e-183 646.7 405 73.3
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 1.7e-183 646.4 404 74.5
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 2.2e-183 646.0 405 74.6
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 2.9e-183 645.6 428 72.0
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 5.0e-183 644.8 404 73.8
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 6.5e-183 644.4 385 77.1
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 8.5e-183 644.0 384 76.6
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.4e-182 643.3 405 73.1
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 1.4e-182 643.3 405 72.6
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 1.4e-182 643.3 405 72.8
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 1.9e-182 642.9 384 75.0
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 1.9e-182 642.9 388 75.0
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 2.5e-182 642.5 382 76.7
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 3.2e-182 642.1 405 72.8
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 3.2e-182 642.1 404 73.8
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 5.5e-182 641.3 405 73.6
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 7.2e-182 641.0 405 72.3
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 1.2e-181 640.2 404 73.3
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 1.6e-181 639.8 405 72.3
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 3.6e-181 638.6 385 75.6
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 3.6e-181 638.6 403 73.4
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 6.1e-181 637.9 384 76.6
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 7.9e-181 637.5 405 72.6
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 1.0e-180 637.1 389 76.1
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 1.4e-180 636.7 392 74.5
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 1.4e-180 636.7 406 73.9
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 3.0e-180 635.6 403 74.2
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 3.9e-180 635.2 383 76.0
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 2.0e-179 632.9 403 73.0
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.0e-179 632.9 406 73.4
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 2.6e-179 632.5 405 72.8
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 4.4e-179 631.7 402 72.9
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 5.7e-179 631.3 386 75.1
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 7.4e-179 630.9 392 73.5
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 7.4e-179 630.9 404 71.5
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 1.3e-178 630.2 437 68.6
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 1.7e-178 629.8 405 71.4
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 2.2e-178 629.4 405 73.1
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 2.8e-178 629.0 402 72.1
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 2.8e-178 629.0 392 73.5
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 6.3e-178 627.9 469 65.7
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 8.2e-178 627.5 407 72.0
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.4e-177 626.7 405 70.4
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 4.1e-177 625.2 405 72.3
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 5.3e-177 624.8 386 73.8
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 7.0e-177 624.4 386 73.6
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 1.2e-176 623.6 365 77.8
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 3.5e-176 622.1 407 71.7
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.5e-176 621.7 402 71.6
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 7.7e-176 620.9 405 71.9
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.3e-175 620.2 386 73.1
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.3e-175 620.2 402 71.1
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 1.7e-175 619.8 405 70.4
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.7e-175 619.8 399 72.9
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 2.2e-175 619.4 416 73.1
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 2.9e-175 619.0 405 71.1
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 5.0e-175 618.2 431 68.7
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 6.5e-175 617.8 432 68.8
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.5e-175 617.8 402 70.9
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 1.9e-174 616.3 431 68.4
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 1.9e-174 616.3 405 71.1
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 2.5e-174 615.9 411 70.6
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 4.2e-174 615.1 424 69.1
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 9.4e-174 614.0 382 75.1
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 6.1e-173 611.3 388 72.7
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 1.0e-172 610.5 389 72.2
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 1.0e-172 610.5 388 72.7
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 3.0e-172 609.0 456 64.9
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 5.2e-172 608.2 389 72.0
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 8.8e-172 607.4 387 73.6
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 9.7e-171 604.0 384 70.8
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 1.4e-169 600.1 362 75.4
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 1.6e-168 596.7 383 70.5
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 2.7e-168 595.9 389 68.1
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 1.0e-167 594.0 383 70.5
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 1.9e-166 589.7 413 68.3
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 4.7e-165 585.1 393 71.2
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 4.7e-157 558.5 386 69.4
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 5.2e-156 555.1 385 69.9
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 5.2e-156 555.1 387 70.3
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 1.9e-150 536.6 300 79.7
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 5.6e-150 535.0 409 63.3
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 7.3e-150 534.6 387 63.8
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 9.5e-150 534.3 384 65.9
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 6.1e-149 531.6 371 67.9
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 5.9e-144 515.0 384 66.9
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 1.6e-141 506.9 406 59.9
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 1.0e-140 504.2 322 70.2
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 1.9e-129 466.8 404 58.4
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 1.2e-128 464.2 421 54.9
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 3.0e-127 459.5 372 61.3
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 1.1e-126 457.6 269 77.0
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.9e-126 456.8 347 63.4
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 1.8e-116 423.7 433 52.9
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 1.2e-112 411.0 448 47.3
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 3.0e-111 406.4 398 52.0
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 6.6e-111 405.2 499 47.9
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 1.5e-107 394.0 443 46.3
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 8.0e-40 169.1 115 66.1
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 1.2e-30 138.7 102 65.7
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.0e-23 113.6 115 49.6
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 2.3e-18 97.8 63 71.4
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 2.8e-16 90.9 136 39.0
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 1.5e-14 85.1 55 67.3
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 1.5e-14 85.1 55 67.3
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.9e-13 80.1 55 63.6
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 4.4e-06 57.0 25 96.0
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 5.8e-06 56.6 122 31.1
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 9.9e-06 55.8 36 63.9


User provided reference genes

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