Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g894 Utricularia gibba HOM05D004488 ORTHO05D005374 5.0e-103 377.9 202 100.0
SGA_v2.0_scaffold83G26377 Striga asiatica HOM05D004488 ORTHO05D005374 2.0e-72 276.2 181 78.5
MSTRG.16621 Avicennia marina HOM05D004488 ORTHO05D005374 2.3e-71 272.7 197 71.6
CARHR241720 Cardamine hirsuta HOM05D004488 ORTHO05D005374 8.0e-69 264.2 192 69.8
Migut.B00550 Erythranthe guttata HOM05D004488 ORTHO05D005374 1.4e-68 263.5 200 70.5
Oeu029681.1 Olea europaea HOM05D004488 ORTHO05D005374 1.8e-68 263.1 202 71.8
Thecc.02G129200 Theobroma cacao HOM05D004488 ORTHO05D005374 4.0e-68 261.9 194 70.6
Glyma.07G182000 Glycine max HOM05D004488 ORTHO05D005374 6.8e-68 261.2 180 72.2
Glyma.08G067800 Glycine max HOM05D004488 ORTHO05D005374 1.2e-67 260.4 174 75.9
GSVIVG01015661001 Vitis vinifera HOM05D004488 ORTHO05D005374 2.0e-67 259.6 186 75.3
COL.COLO4_32390 Corchorus olitorius HOM05D004488 ORTHO05D005374 4.4e-67 258.5 177 72.9
Gohir.D13G049600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 7.5e-67 257.7 202 67.3
Phvul.002G213000 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 9.8e-67 257.3 187 71.1
Sp7g31350 Schrenkiella parvula HOM05D004488 ORTHO05D005374 9.8e-67 257.3 175 72.0
Carub.0007s0681 Capsella rubella HOM05D004488 ORTHO05D005374 1.7e-66 256.5 184 70.1
FAN20G0168 Fragaria x ananassa HOM05D004488 ORTHO05D005374 2.2e-66 256.1 181 72.4
AL7G17880 Arabidopsis lyrata HOM05D004488 ORTHO05D005374 2.9e-66 255.8 187 69.0
Hund06459 Selenicereus undatus HOM05D004488 ORTHO05D005374 3.7e-66 255.4 182 70.3
AT4G33625 Arabidopsis thaliana HOM05D004488 ORTHO05D005374 6.4e-66 254.6 187 69.0
Gohir.A13G050800 Gossypium hirsutum HOM05D004488 ORTHO05D005374 6.4e-66 254.6 188 69.7
Prupe.8G070100 Prunus persica HOM05D004488 ORTHO05D005374 6.4e-66 254.6 184 70.1
CSS0028940 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 8.3e-66 254.2 169 76.3
Eucgr.G00989 Eucalyptus grandis HOM05D004488 ORTHO05D005374 1.4e-65 253.4 182 69.2
Manes.07G041900 Manihot esculenta HOM05D004488 ORTHO05D005374 1.4e-65 253.4 190 67.9
Potri.017G043200 Populus trichocarpa HOM05D004488 ORTHO05D005374 1.4e-65 253.4 166 77.1
BcaNung02186 Brassica carinata HOM05D004488 ORTHO05D005374 1.9e-65 253.1 184 69.0
CSS0011276 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 1.9e-65 253.1 185 71.4
Hma1.2p1_0908F.1_g235500 Hydrangea macrophylla HOM05D004488 ORTHO05D005374 1.9e-65 253.1 184 71.7
Oeu010528.2 Olea europaea HOM05D004488 ORTHO05D005374 1.9e-65 253.1 227 64.3
Actinidia02393 Actinidia chinensis HOM05D004488 ORTHO05D005374 4.1e-65 251.9 187 69.5
RcHm_v2.0_Chr6g0270971 Rosa chinensis HOM05D004488 ORTHO05D005374 4.1e-65 251.9 171 74.9
TWI14G0417 Tripterygium wilfordii HOM05D004488 ORTHO05D005374 4.1e-65 251.9 188 68.1
VMungo0251G0098 Vigna mungo HOM05D004488 ORTHO05D005374 7.0e-65 251.1 187 70.6
Thhalv10026279m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 9.2e-65 250.8 178 70.2
FvH4_2g11740 Fragaria vesca HOM05D004488 ORTHO05D005374 9.2e-65 250.8 181 71.3
Sc18g0007070 Simmondsia chinensis HOM05D004488 ORTHO05D005374 9.2e-65 250.8 182 68.7
Ciclev10029296m.g Citrus clementina HOM05D004488 ORTHO05D005374 1.2e-64 250.4 180 68.9
Medtr2g009630 Medicago truncatula HOM05D004488 ORTHO05D005374 1.2e-64 250.4 177 71.8
CSS0006356 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 2.0e-64 249.6 185 70.3
MD10G1054500 Malus domestica HOM05D004488 ORTHO05D005374 2.0e-64 249.6 190 68.4
Dinv16003 Davidia involucrata HOM05D004488 ORTHO05D005374 4.6e-64 248.4 194 69.1
MD05G1047700 Malus domestica HOM05D004488 ORTHO05D005374 4.6e-64 248.4 178 71.3
SalBow6G2847 Salvia bowleyana HOM05D004488 ORTHO05D005374 6.0e-64 248.1 169 74.6
SalBow6G6277 Salvia bowleyana HOM05D004488 ORTHO05D005374 6.0e-64 248.1 169 74.6
THA.LOC104807182 Tarenaya hassleriana HOM05D004488 ORTHO05D005374 6.0e-64 248.1 198 63.6
Rhsim11G0142400 Rhododendron simsii HOM05D004488 ORTHO05D005374 1.0e-63 247.3 199 68.3
Lalb_Chr16g0382951 Lupinus albus HOM05D004488 ORTHO05D005374 1.3e-63 246.9 179 70.4
Nn5g29881 Nelumbo nucifera HOM05D004488 ORTHO05D005374 1.3e-63 246.9 188 69.1
Peaxi162Scf00299g00625 Petunia axillaris HOM05D004488 ORTHO05D005374 1.7e-63 246.5 180 73.3
A01p04690 Brassica napus HOM05D004488 ORTHO05D005374 3.9e-63 245.4 183 69.9
C01p05080 Brassica napus HOM05D004488 ORTHO05D005374 3.9e-63 245.4 183 69.4
C07p59770 Brassica napus HOM05D004488 ORTHO05D005374 3.9e-63 245.4 193 65.8
BolC1t00490H Brassica oleracea HOM05D004488 ORTHO05D005374 3.9e-63 245.4 183 69.4
BolC7t46423H Brassica oleracea HOM05D004488 ORTHO05D005374 3.9e-63 245.4 193 65.8
BraA01t00452Z Brassica rapa HOM05D004488 ORTHO05D005374 3.9e-63 245.4 183 69.9
Cpa.g.sc20.3 Carica papaya HOM05D004488 ORTHO05D005374 3.9e-63 245.4 180 68.3
CANSAT54G1769 Cannabis sativa HOM05D004488 ORTHO05D005374 5.0e-63 245.0 179 69.8
Manes.10G097800 Manihot esculenta HOM05D004488 ORTHO05D005374 5.0e-63 245.0 181 69.6
Lj4g0013422 Lotus japonicus HOM05D004488 ORTHO05D005374 6.6e-63 244.6 173 72.3
Actinidia00306 Actinidia chinensis HOM05D004488 ORTHO05D005374 8.6e-63 244.2 160 77.5
Sopen01g048360 Solanum pennellii HOM05D004488 ORTHO05D005374 1.1e-62 243.8 180 71.7
TAR381G0147 Trochodendron aralioides HOM05D004488 ORTHO05D005374 1.1e-62 243.8 182 68.7
Duzib132G0794 Durio zibethinus HOM05D004488 ORTHO05D005374 2.5e-62 242.7 183 68.3
Lalb_Chr05g0217811 Lupinus albus HOM05D004488 ORTHO05D005374 2.5e-62 242.7 179 68.2
Solyc01g105980.3 Solanum lycopersicum HOM05D004488 ORTHO05D005374 3.3e-62 242.3 180 71.1
CiPaw.05G029400 Carya illinoinensis HOM05D004488 ORTHO05D005374 4.3e-62 241.9 196 64.3
MBI16_g12465_MAGBIO Magnolia biondii HOM05D004488 ORTHO05D005374 1.2e-61 240.4 183 67.2
PGR042G1599 Punica granatum HOM05D004488 ORTHO05D005374 2.1e-61 239.6 177 68.4
AUR62012885 Chenopodium quinoa HOM05D004488 ORTHO05D005374 2.8e-61 239.2 177 66.1
Nn1g05574 Nelumbo nucifera HOM05D004488 ORTHO05D005374 2.8e-61 239.2 166 73.5
AUR62027109 Chenopodium quinoa HOM05D004488 ORTHO05D005374 3.6e-61 238.8 199 61.8
Atru.chr6.1271 Acer truncatum HOM05D004488 ORTHO05D005374 4.7e-61 238.4 180 68.3
QL11p025232 Quercus lobata HOM05D004488 ORTHO05D005374 4.7e-61 238.4 191 63.9
PGSC0003DMG400033581 Solanum tuberosum HOM05D004488 ORTHO05D005374 6.2e-61 238.0 180 70.6
BcaC09g52174 Brassica carinata HOM05D004488 ORTHO05D005374 8.0e-61 237.7 174 69.5
CDE04G0584 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 8.0e-61 237.7 188 65.4
Gorai.013G055400 Gossypium raimondii HOM05D004488 ORTHO05D005374 8.0e-61 237.7 183 67.2
CAN.G997.3 Capsicum annuum HOM05D004488 ORTHO05D005374 1.1e-60 237.3 169 73.4
CiPaw.06G157800 Carya illinoinensis HOM05D004488 ORTHO05D005374 1.1e-60 237.3 180 67.8
Sabra17G0029400 Salix brachista HOM05D004488 ORTHO05D005374 1.4e-60 236.9 150 78.0
Lsat_1_v5_gn_5_110001 Lactuca sativa HOM05D004488 ORTHO05D005374 1.8e-60 236.5 196 62.8
BraA03t15251Z Brassica rapa HOM05D004488 ORTHO05D005374 3.1e-60 235.7 166 70.5
HanXRQChr16g0514551 Helianthus annuus HOM05D004488 ORTHO05D005374 3.1e-60 235.7 169 71.0
Glyma.13G256500 Glycine max HOM05D004488 ORTHO05D005374 4.0e-60 235.3 180 67.8
Rhsim11G0140000 Rhododendron simsii HOM05D004488 ORTHO05D005374 4.0e-60 235.3 215 62.8
vmacro01860 Vaccinium macrocarpon HOM05D004488 ORTHO05D005374 6.8e-60 234.6 197 62.9
Ah.01g023950 Amaranthus hybridus HOM05D004488 ORTHO05D005374 8.9e-60 234.2 185 63.8
HanXRQChr10g0289991 Helianthus annuus HOM05D004488 ORTHO05D005374 2.0e-59 233.0 186 65.6
Psat1g214000 Pisum sativum HOM05D004488 ORTHO05D005374 3.4e-59 232.3 177 65.0
HPP92_019609 Vanilla planifolia HOM05D004488 ORTHO05D005374 3.4e-59 232.3 196 63.8
TAR625G0886 Trochodendron aralioides HOM05D004488 ORTHO05D005374 9.8e-59 230.7 178 67.4
arahy.Tifrunner.gnm1.ann1.YWY5YF Arachis hypogaea HOM05D004488 ORTHO05D005374 1.3e-58 230.3 161 72.7
PSO541G1276 Papaver somniferum HOM05D004488 ORTHO05D005374 2.2e-58 229.6 178 69.7
arahy.Tifrunner.gnm1.ann1.80YYCP Arachis hypogaea HOM05D004488 ORTHO05D005374 2.9e-58 229.2 161 72.0
ECA234G4299 Erigeron canadensis HOM05D004488 ORTHO05D005374 3.7e-58 228.8 175 65.7
ATR0767G217 Amborella trichopoda HOM05D004488 ORTHO05D005374 4.9e-58 228.4 193 62.2
Hund00379 Selenicereus undatus HOM05D004488 ORTHO05D005374 4.9e-58 228.4 199 59.3
EL10Ac9g22071 Beta vulgaris HOM05D004488 ORTHO05D005374 6.4e-58 228.0 174 64.9
CsaV3_4G014750 Cucumis sativus L. HOM05D004488 ORTHO05D005374 6.4e-58 228.0 176 66.5
FAN24G0482 Fragaria x ananassa HOM05D004488 ORTHO05D005374 8.3e-58 227.6 181 66.9
PSO210G5219 Papaver somniferum HOM05D004488 ORTHO05D005374 1.1e-57 227.3 180 65.0
Phvul.006G201800 Phaseolus vulgaris HOM05D004488 ORTHO05D005374 1.9e-57 226.5 181 66.3
PSO675G8955 Papaver somniferum HOM05D004488 ORTHO05D005374 2.4e-57 226.1 178 69.1
Nitab4.5_0002095g0050 Nicotiana tabacum HOM05D004488 ORTHO05D005374 4.1e-57 225.3 161 74.5
Nitab4.5_0001636g0030 Nicotiana tabacum HOM05D004488 ORTHO05D005374 5.4e-57 224.9 162 72.8
Rhsim11G0142300 Rhododendron simsii HOM05D004488 ORTHO05D005374 9.2e-57 224.2 164 70.1
Os07g0118300 Oryza sativa ssp. japonica HOM05D004488 ORTHO05D005374 2.1e-56 223.0 172 66.9
CDE01G0475 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 2.7e-56 222.6 183 62.3
Aqoxy5G01383 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 4.6e-56 221.9 178 62.4
Sed0014769 Sechium edule HOM05D004488 ORTHO05D005374 6.0e-56 221.5 175 65.7
Zm00001eb118020 Zea mays HOM05D004488 ORTHO05D005374 6.0e-56 221.5 184 64.1
SEGI_26358 Sequoiadendron giganteum HOM05D004488 ORTHO05D005374 1.3e-55 220.3 170 66.5
Aa31sc21G80 Aethionema arabicum HOM05D004488 ORTHO05D005374 1.7e-55 219.9 215 55.3
ClCG10G009630 Citrullus lanatus HOM05D004488 ORTHO05D005374 5.1e-55 218.4 208 58.2
Potri.007G115800 Populus trichocarpa HOM05D004488 ORTHO05D005374 1.6e-53 213.4 182 59.9
Lj6g0006499 Lotus japonicus HOM05D004488 ORTHO05D005374 2.1e-53 213.0 186 63.4
Rhsim11G0139900 Rhododendron simsii HOM05D004488 ORTHO05D005374 6.2e-53 211.5 185 62.2
Cc02_g20910 Coffea canephora HOM05D004488 ORTHO05D005374 3.4e-51 205.7 180 61.7
VMungo0540G1072 Vigna mungo HOM05D004488 ORTHO05D005374 7.6e-51 204.5 179 61.5
Aqoxy6G00871 Aquilegia oxysepala HOM05D004488 ORTHO05D005374 8.3e-50 201.1 177 60.5
TAR625G0448 Trochodendron aralioides HOM05D004488 ORTHO05D005374 3.5e-48 195.7 142 67.6
MELO3C018054.2 Cucumis melo HOM05D004488 ORTHO05D005374 5.1e-47 191.8 167 61.1
SMO361G0551 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 1.2e-45 187.2 164 59.8
DCAR_032425 Daucus carota HOM05D004488 ORTHO05D005374 6.2e-45 184.9 184 56.5
SMO361G0333 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 3.1e-44 182.6 163 57.7
Zm00001eb299000 Zea mays HOM05D004488 ORTHO05D005374 6.8e-44 181.4 167 58.7
Lj5C230T1 Lonicera japonica HOM05D004488 ORTHO05D005374 3.4e-43 179.1 212 52.8
Sed0000556 Sechium edule HOM05D004488 ORTHO05D005374 2.2e-42 176.4 134 64.9
AagrBONN_evm.TU.Sc2ySwM_117.2605 Anthoceros agrestis HOM05D004488 ORTHO05D005374 1.1e-41 174.1 168 56.0
DCAR_001857 Daucus carota HOM05D004488 ORTHO05D005374 1.1e-33 147.5 103 72.8
Pp3c13_16610 Physcomitrium patens HOM05D004488 ORTHO05D005374 1.4e-33 147.1 194 44.8
Pp3c15_10510 Physcomitrium patens HOM05D004488 ORTHO05D005374 3.2e-33 146.0 171 47.4
TWI59G0067 Tripterygium wilfordii HOM05D004488 ORTHO05D005374 3.2e-33 146.0 94 74.5
Pp3c4_7970 Physcomitrium patens HOM05D004488 ORTHO05D005374 2.1e-32 143.3 198 44.4
SMO361G0358 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 2.1e-32 143.3 125 59.2
TPR.G9512 Trifolium pratense HOM05D004488 ORTHO05D005374 3.9e-31 139.0 93 73.1
CSS0017372 Camellia sinensis var. sinensis HOM05D004488 ORTHO05D005374 6.6e-31 138.3 84 76.2
Lj9A348T63 Lonicera japonica HOM05D004488 ORTHO05D005374 1.5e-30 137.1 100 73.0
Actinidia28030 Actinidia chinensis HOM05D004488 ORTHO05D005374 2.5e-30 136.3 99 72.7
Cfa005736 Carpinus fangiana HOM05D004488 ORTHO05D005374 2.5e-30 136.3 94 70.2
CDE02G2113 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 7.3e-30 134.8 102 65.7
Mapoly0135s0052 Marchantia polymorpha HOM05D004488 ORTHO05D005374 1.2e-27 127.5 139 51.8
Haze_10520 Corylus avellana HOM05D004488 ORTHO05D005374 2.9e-26 122.9 87 67.8
Lj9A348T62 Lonicera japonica HOM05D004488 ORTHO05D005374 8.4e-26 121.3 93 64.5
TPR.G8448 Trifolium pratense HOM05D004488 ORTHO05D005374 1.5e-22 110.5 85 67.1
Actinidia30718 Actinidia chinensis HOM05D004488 ORTHO05D005374 1.1e-20 104.4 140 44.3
CDE02G4257 Ceratophyllum demersum HOM05D004488 ORTHO05D005374 2.5e-17 93.2 82 59.8
Haze_10521 Corylus avellana HOM05D004488 ORTHO05D005374 1.8e-15 87.0 68 61.8
Cre09.g398845 Chlamydomonas reinhardtii HOM05D004488 ORTHO05D005374 1.5e-14 84.0 135 34.8
CAN.G755.11 Capsicum annuum HOM05D004488 ORTHO05D005374 4.3e-14 82.4 76 59.2
BraA03t15274Z Brassica rapa HOM05D004488 ORTHO05D005374 1.1e-12 77.8 62 64.5
A03p62120 Brassica napus HOM05D004488 ORTHO05D005374 6.5e-10 68.6 55 58.2
SMO361G0062 Selaginella moellendorffii HOM05D004488 ORTHO05D005374 3.2e-09 66.2 96 41.7
Ca_00165_v3 Cicer arietinum L. HOM05D004488 ORTHO05D005374 5.5e-09 65.5 47 63.8
Thhalv10002778m.g Eutrema salsugineum HOM05D004488 ORTHO05D005374 4.6e-08 62.4 42 73.8
Gohir.A11G229600 Gossypium hirsutum HOM05D004488 ORTHO05D005374 5.1e-07 58.9 49 63.3
Zm00001eb345470 Zea mays HOM05D001942 ORTHO05D008996 1.1e-06 57.8 60 55.0
Zm00001eb130380 Zea mays HOM05D001942 ORTHO05D008996 7.4e-06 55.1 60 53.3


User provided reference genes

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