Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g886 Utricularia gibba HOM05D002243 ORTHO05D001848 6.0e-151 537.7 324 100.0
unitig_61.g26040 Utricularia gibba HOM05D002243 ORTHO05D001848 6.1e-26 122.5 322 41.6
unitig_46.g18837 Utricularia gibba HOM05D002243 ORTHO05D001848 2.1e-18 97.4 405 31.6
MSTRG.27769 Avicennia marina HOM05D002243 ORTHO05D001848 2.2e-12 77.4 111 41.4
MSTRG.16664 Avicennia marina HOM05D002243 ORTHO05D001848 1.1e-11 75.1 102 41.2
MD10G1112600 Malus domestica HOM05D002243 ORTHO05D001848 4.2e-11 73.2 72 45.8
Solyc01g106680.4 Solanum lycopersicum HOM05D002243 ORTHO05D001848 5.5e-11 72.8 113 37.2
CAN.G504.9 Capsicum annuum HOM05D002243 ORTHO05D001848 7.2e-11 72.4 107 41.1
HanXRQChr09g0263091 Helianthus annuus HOM05D002243 ORTHO05D001848 7.2e-11 72.4 114 38.6
Migut.B00490 Erythranthe guttata HOM05D002243 ORTHO05D001848 1.6e-10 71.2 123 37.4
RcHm_v2.0_Chr1g0336871 Rosa chinensis HOM05D002243 ORTHO05D001848 2.7e-10 70.5 72 45.8
Nitab4.5_0001477g0030 Nicotiana tabacum HOM05D002243 ORTHO05D001848 3.6e-10 70.1 116 39.7
Oeu010475.1 Olea europaea HOM05D002243 ORTHO05D001848 3.6e-10 70.1 96 40.6
Ciclev10028128m.g Citrus clementina HOM05D002243 ORTHO05D001848 4.7e-10 69.7 95 41.1
Sopen01g049010 Solanum pennellii HOM05D002243 ORTHO05D001848 4.7e-10 69.7 118 35.6
GSVIVG01006594001 Vitis vinifera HOM05D002243 ORTHO05D001848 4.7e-10 69.7 80 47.5
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 6.1e-10 69.3 83 42.2
MD15G1395300 Malus domestica HOM05D002243 ORTHO05D001848 6.1e-10 69.3 109 39.4
Prupe.8G152300 Prunus persica HOM05D002243 ORTHO05D001848 7.9e-10 68.9 72 41.7
Sabra16G0180600 Salix brachista HOM05D002243 ORTHO05D001848 7.9e-10 68.9 84 41.7
Ah.01g024500 Amaranthus hybridus HOM05D002243 ORTHO05D001848 1.0e-09 68.6 70 48.6
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.0e-09 68.6 72 44.4
Duzib132G0349 Durio zibethinus HOM05D002243 ORTHO05D001848 1.0e-09 68.6 72 44.4
Actinidia02430 Actinidia chinensis HOM05D002243 ORTHO05D001848 2.3e-09 67.4 86 43.0
CiPaw.08G028200 Carya illinoinensis HOM05D002243 ORTHO05D001848 2.3e-09 67.4 112 38.4
FAN15G2335 Fragaria x ananassa HOM05D002243 ORTHO05D001848 2.3e-09 67.4 105 39.0
FAN20G2409 Fragaria x ananassa HOM05D002243 ORTHO05D001848 2.3e-09 67.4 105 39.0
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 2.3e-09 67.4 112 37.5
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 2.3e-09 67.4 112 37.5
Potri.009G083900 Populus trichocarpa HOM05D002243 ORTHO05D001848 2.3e-09 67.4 111 36.0
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 3.0e-09 67.0 84 38.1
vmacro22263 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 3.0e-09 67.0 78 42.3
Duzib264G1092 Durio zibethinus HOM05D002243 ORTHO05D001848 3.9e-09 66.6 87 41.4
Gorai.003G033900 Gossypium raimondii HOM05D002243 ORTHO05D001848 3.9e-09 66.6 112 39.3
Psat6g212880 Pisum sativum HOM05D002243 ORTHO05D001848 3.9e-09 66.6 66 43.9
FvH4_2g02971 Fragaria vesca HOM05D002243 ORTHO05D001848 5.1e-09 66.2 111 37.8
FAN24G3407 Fragaria x ananassa HOM05D002243 ORTHO05D001848 5.1e-09 66.2 111 37.8
Potri.001G288800 Populus trichocarpa HOM05D002243 ORTHO05D001848 5.1e-09 66.2 84 40.5
RcHm_v2.0_Chr6g0247781 Rosa chinensis HOM05D002243 ORTHO05D001848 5.1e-09 66.2 112 39.3
Gohir.D03G032300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 6.7e-09 65.9 112 39.3
Lj9P338T47 Lonicera japonica HOM05D002243 ORTHO05D001848 6.7e-09 65.9 78 41.0
Sed0013875 Sechium edule HOM05D002243 ORTHO05D001848 6.7e-09 65.9 80 40.0
Ciclev10025075m.g Citrus clementina HOM05D002243 ORTHO05D001848 1.1e-08 65.1 116 40.5
Duzib147G0075 Durio zibethinus HOM05D002243 ORTHO05D001848 1.1e-08 65.1 99 39.4
FAN18G0601 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.1e-08 65.1 78 43.6
FAN27G0993 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.1e-08 65.1 105 38.1
Glyma.05G110000 Glycine max HOM05D002243 ORTHO05D001848 1.1e-08 65.1 72 45.8
Glyma.17G157100 Glycine max HOM05D002243 ORTHO05D001848 1.1e-08 65.1 78 43.6
Thecc.01G079600 Theobroma cacao HOM05D002243 ORTHO05D001848 1.1e-08 65.1 114 38.6
MSTRG.20241 Avicennia marina HOM05D002243 ORTHO05D001848 1.5e-08 64.7 369 27.1
ClCG01G017950 Citrullus lanatus HOM05D002243 ORTHO05D001848 1.5e-08 64.7 111 36.0
DCAR_001867 Daucus carota HOM05D002243 ORTHO05D001848 1.5e-08 64.7 97 35.1
Duzib187G1983 Durio zibethinus HOM05D002243 ORTHO05D001848 1.5e-08 64.7 92 37.0
FvH4_5g33410 Fragaria vesca HOM05D002243 ORTHO05D001848 1.5e-08 64.7 78 43.6
Gohir.A02G148100 Gossypium hirsutum HOM05D002243 ORTHO05D001848 1.5e-08 64.7 112 38.4
HanXRQChr11g0323891 Helianthus annuus HOM05D002243 ORTHO05D001848 1.5e-08 64.7 109 37.6
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.5e-08 64.7 101 40.6
MSTRG.2796 Avicennia marina HOM05D002243 ORTHO05D001848 2.0e-08 64.3 43 65.1
Phvul.007G048200 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 2.0e-08 64.3 91 39.6
Ah.01g007180 Amaranthus hybridus HOM05D002243 ORTHO05D001848 2.6e-08 63.9 77 44.2
Thhalv10000072m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 2.6e-08 63.9 129 35.7
MBI16_g31808_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 2.6e-08 63.9 75 45.3
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 2.6e-08 63.9 110 34.5
SGA_v2.0_scaffold121G33087 Striga asiatica HOM05D002243 ORTHO05D001848 2.6e-08 63.9 116 37.9
VMungo0720G2670 Vigna mungo HOM05D002243 ORTHO05D001848 2.6e-08 63.9 87 41.4
Nitab4.5_0000396g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 3.3e-08 63.5 121 35.5
SalBow6G5711 Salvia bowleyana HOM05D002243 ORTHO05D001848 3.3e-08 63.5 188 29.8
vmacro01929 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 3.3e-08 63.5 83 41.0
MSTRG.23645 Avicennia marina HOM05D002243 ORTHO05D001848 4.4e-08 63.2 98 37.8
Lsat_1_v5_gn_2_81560 Lactuca sativa HOM05D002243 ORTHO05D001848 4.4e-08 63.2 72 44.4
Lalb_Chr09g0329371 Lupinus albus HOM05D002243 ORTHO05D001848 4.4e-08 63.2 129 36.4
Nitab4.5_0006325g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 4.4e-08 63.2 121 35.5
Oeu061818.1 Olea europaea HOM05D002243 ORTHO05D001848 4.4e-08 63.2 79 41.8
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 4.4e-08 63.2 94 38.3
MD05G1108600 Malus domestica HOM05D002243 ORTHO05D001848 5.7e-08 62.8 113 38.1
Phvul.003G231700 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 5.7e-08 62.8 72 43.1
Aa31LG7G14010 Aethionema arabicum HOM05D002243 ORTHO05D001848 7.4e-08 62.4 117 35.9
CANSAT21G1644 Cannabis sativa HOM05D002243 ORTHO05D001848 7.4e-08 62.4 121 33.9
Dinv26979 Davidia involucrata HOM05D002243 ORTHO05D001848 7.4e-08 62.4 78 43.6
Duzib052G0991 Durio zibethinus HOM05D002243 ORTHO05D001848 7.4e-08 62.4 70 44.3
FAN08G2076 Fragaria x ananassa HOM05D002243 ORTHO05D001848 7.4e-08 62.4 107 37.4
Glyma.20G136900 Glycine max HOM05D002243 ORTHO05D001848 7.4e-08 62.4 73 45.2
Gohir.D02G234800 Gossypium hirsutum HOM05D002243 ORTHO05D001848 7.4e-08 62.4 72 41.7
Gorai.005G262800 Gossypium raimondii HOM05D002243 ORTHO05D001848 7.4e-08 62.4 72 41.7
Gorai.008G087300 Gossypium raimondii HOM05D002243 ORTHO05D001848 7.4e-08 62.4 109 34.9
Lj5g0020290 Lotus japonicus HOM05D002243 ORTHO05D001848 7.4e-08 62.4 105 37.1
Medtr1g105890 Medicago truncatula HOM05D002243 ORTHO05D001848 7.4e-08 62.4 112 38.4
Ca_11007_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 9.7e-08 62.0 114 38.6
Ca_22085_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 9.7e-08 62.0 112 36.6
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 9.7e-08 62.0 95 40.0
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 9.7e-08 62.0 95 40.0
TWI59G0771 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 9.7e-08 62.0 72 43.1
arahy.Tifrunner.gnm1.ann1.2Q65GK Arachis hypogaea HOM05D002243 ORTHO05D001848 1.3e-07 61.6 113 38.9
BcaC02g08599 Brassica carinata HOM05D002243 ORTHO05D001848 1.3e-07 61.6 100 38.0
C04p52120 Brassica napus HOM05D002243 ORTHO05D001848 1.3e-07 61.6 100 38.0
BolC4t26786H Brassica oleracea HOM05D002243 ORTHO05D001848 1.3e-07 61.6 100 38.0
AUR62027035 Chenopodium quinoa HOM05D002243 ORTHO05D001848 1.3e-07 61.6 43 60.5
AUR62030879 Chenopodium quinoa HOM05D002243 ORTHO05D001848 1.3e-07 61.6 43 60.5
Oeu039769.1 Olea europaea HOM05D002243 ORTHO05D001848 1.3e-07 61.6 115 36.5
Psat4g088240 Pisum sativum HOM05D002243 ORTHO05D001848 1.3e-07 61.6 111 37.8
Thecc.02G032300 Theobroma cacao HOM05D002243 ORTHO05D001848 1.3e-07 61.6 106 36.8
CANSAT25G2495 Cannabis sativa HOM05D002243 ORTHO05D001848 1.7e-07 61.2 72 41.7
CiPaw.07G039400 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.7e-07 61.2 78 43.6
Sc14g0002480 Simmondsia chinensis HOM05D002243 ORTHO05D001848 1.7e-07 61.2 43 60.5
ECA238G4103 Erigeron canadensis HOM05D002243 ORTHO05D001848 2.2e-07 60.8 110 36.4
Lj4g0010467 Lotus japonicus HOM05D002243 ORTHO05D001848 2.2e-07 60.8 116 37.1
Hund06501 Selenicereus undatus HOM05D002243 ORTHO05D001848 2.2e-07 60.8 97 39.2
Ca_28397_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 2.8e-07 60.5 112 36.6
Potri.007G008600 Populus trichocarpa HOM05D002243 ORTHO05D001848 2.8e-07 60.5 96 39.6
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 3.7e-07 60.1 121 38.0
AL7G12850 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 3.7e-07 60.1 317 27.1
CsaV3_6G044480 Cucumis sativus L. HOM05D002243 ORTHO05D001848 3.7e-07 60.1 112 34.8
Eucgr.G01184 Eucalyptus grandis HOM05D002243 ORTHO05D001848 3.7e-07 60.1 105 32.4
HanXRQChr06g0181751 Helianthus annuus HOM05D002243 ORTHO05D001848 3.7e-07 60.1 72 43.1
Peaxi162Scf00096g00157 Petunia axillaris HOM05D002243 ORTHO05D001848 3.7e-07 60.1 113 35.4
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 3.7e-07 60.1 112 36.6
Atru.chr3.1086 Acer truncatum HOM05D002243 ORTHO05D001848 4.8e-07 59.7 92 40.2
MELO3C018032.2 Cucumis melo HOM05D002243 ORTHO05D001848 4.8e-07 59.7 101 37.6
DCAR_019339 Daucus carota HOM05D002243 ORTHO05D001848 4.8e-07 59.7 119 37.0
Dinv41660 Davidia involucrata HOM05D001922 ORTHO05D001441 4.8e-07 59.7 94 34.0
Migut.H00311 Erythranthe guttata HOM05D002243 ORTHO05D001848 4.8e-07 59.7 78 41.0
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 4.8e-07 59.7 95 40.0
Glyma.17G086000 Glycine max HOM05D002243 ORTHO05D001848 4.8e-07 59.7 88 42.0
Gohir.A12G081200 Gossypium hirsutum HOM05D002243 ORTHO05D001848 4.8e-07 59.7 104 34.6
Manes.12G119100 Manihot esculenta HOM05D002243 ORTHO05D001848 4.8e-07 59.7 74 40.5
PGSC0003DMG400030665 Solanum tuberosum HOM05D002243 ORTHO05D001848 4.8e-07 59.7 123 35.8
TWI14G1334 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 4.8e-07 59.7 72 41.7
CARHR114080 Cardamine hirsuta HOM05D002243 ORTHO05D001848 6.3e-07 59.3 108 37.0
Gohir.D12G078400 Gossypium hirsutum HOM05D002243 ORTHO05D001848 6.3e-07 59.3 105 34.3
Hma1.2p1_2654F.1_g326230 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 6.3e-07 59.3 78 43.6
Rhsim10G0087400 Rhododendron simsii HOM05D002243 ORTHO05D001848 6.3e-07 59.3 112 39.3
Carub.0004s0193 Capsella rubella HOM05D002243 ORTHO05D001848 8.2e-07 58.9 117 37.6
Gohir.A03G213300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 8.2e-07 58.9 96 35.4
BraA01t00442Z Brassica rapa HOM05D010391 ORTHO05D001848 1.1e-06 58.5 91 38.5
CARHR246210 Cardamine hirsuta HOM05D002243 ORTHO05D001848 1.1e-06 58.5 316 27.8
Cfa004723 Carpinus fangiana HOM05D002243 ORTHO05D001848 1.1e-06 58.5 111 36.0
Lj1g0019537 Lotus japonicus HOM05D002243 ORTHO05D001848 1.1e-06 58.5 96 35.4
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 1.1e-06 58.5 110 35.5
PGR042G1190 Punica granatum HOM05D002243 ORTHO05D001848 1.1e-06 58.5 77 37.7
Sabra09G0064600 Salix brachista HOM05D002243 ORTHO05D001848 1.1e-06 58.5 112 33.0
Haze_10330 Corylus avellana HOM05D002243 ORTHO05D001848 1.4e-06 58.2 111 35.1
Glyma.01G241100 Glycine max HOM05D002243 ORTHO05D001848 1.4e-06 58.2 106 37.7
Sabra07G0006700 Salix brachista HOM05D002243 ORTHO05D001848 1.4e-06 58.2 96 36.5
TWI77G0733 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 1.4e-06 58.2 72 41.7
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 1.8e-06 57.8 116 34.5
Aqoxy6G01532 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 1.8e-06 57.8 76 48.7
MD02G1193800 Malus domestica HOM05D002243 ORTHO05D001848 1.8e-06 57.8 112 37.5
Solyc02g091890.3 Solanum lycopersicum HOM05D002243 ORTHO05D001848 1.8e-06 57.8 94 35.1
Sopen02g036460 Solanum pennellii HOM05D002243 ORTHO05D001848 1.8e-06 57.8 94 35.1
ClCG10G009920 Citrullus lanatus HOM05D002243 ORTHO05D001848 2.4e-06 57.4 97 36.1
TPR.G22426 Trifolium pratense HOM05D002243 ORTHO05D001848 2.4e-06 57.4 111 36.0
BcaC09g52185 Brassica carinata HOM05D010391 ORTHO05D001848 3.1e-06 57.0 78 39.7
C01p04980 Brassica napus HOM05D010391 ORTHO05D001848 3.1e-06 57.0 78 39.7
BolC1t00479H Brassica oleracea HOM05D010391 ORTHO05D001848 3.1e-06 57.0 78 39.7
Cfa006795 Carpinus fangiana HOM05D002243 ORTHO05D001848 3.1e-06 57.0 116 34.5
Haze_03961 Corylus avellana HOM05D002243 ORTHO05D001848 3.1e-06 57.0 129 34.9
Manes.10G087900 Manihot esculenta HOM05D002243 ORTHO05D001848 3.1e-06 57.0 120 34.2
Prupe.6G213200 Prunus persica HOM05D002243 ORTHO05D001848 3.1e-06 57.0 121 34.7
PGR004G1094 Punica granatum HOM05D002243 ORTHO05D001848 3.1e-06 57.0 43 55.8
AT2G22795 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 4.1e-06 56.6 115 34.8
CANSAT01G3077 Cannabis sativa HOM05D002243 ORTHO05D001848 4.1e-06 56.6 115 36.5
CAN.G1061.5 Capsicum annuum HOM05D002243 ORTHO05D001848 4.1e-06 56.6 122 33.6
ECA232G3326 Erigeron canadensis HOM05D002243 ORTHO05D001848 4.1e-06 56.6 178 38.2
Eucgr.I00650 Eucalyptus grandis HOM05D002243 ORTHO05D001848 4.1e-06 56.6 43 55.8
Thhalv10024837m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 4.1e-06 56.6 101 35.6
Lsat_1_v5_gn_4_159100 Lactuca sativa HOM05D002243 ORTHO05D001848 4.1e-06 56.6 113 35.4
Sabra02G0089100 Salix brachista HOM05D002243 ORTHO05D001848 4.1e-06 56.6 115 37.4
CDE02G1478 Ceratophyllum demersum HOM05D064956 ORTHO05D001848 5.3e-06 56.2 43 55.8
Lj2A425T27 Lonicera japonica HOM05D002243 ORTHO05D001848 5.3e-06 56.2 109 33.9
Manes.07G051400 Manihot esculenta HOM05D002243 ORTHO05D001848 5.3e-06 56.2 113 35.4
Potri.002G112800 Populus trichocarpa HOM05D002243 ORTHO05D001848 5.3e-06 56.2 120 35.0
TWI74G1522 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 5.3e-06 56.2 72 40.3
AL4G12330 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 7.0e-06 55.8 130 33.8
BcaNung04675 Brassica carinata HOM05D010391 ORTHO05D001848 7.0e-06 55.8 82 39.0
BraA09t41115Z Brassica rapa HOM05D002243 ORTHO05D001848 7.0e-06 55.8 118 36.4
Cfa013396 Carpinus fangiana HOM05D002243 ORTHO05D001848 7.0e-06 55.8 111 36.0
CDE01G0230 Ceratophyllum demersum HOM05D002243 ORTHO05D001848 7.0e-06 55.8 74 43.2
Medtr5g005430 Medicago truncatula HOM05D002243 ORTHO05D001848 7.0e-06 55.8 78 37.2
QL06p038195 Quercus lobata HOM05D002243 ORTHO05D001848 7.0e-06 55.8 126 38.1
SEGI_35164 Sequoiadendron giganteum HOM05D002243 ORTHO05D001848 7.0e-06 55.8 117 35.9
BcaB06g27840 Brassica carinata HOM05D002243 ORTHO05D001848 9.1e-06 55.5 141 29.8
Cc07_g07600 Coffea canephora HOM05D023692 ORTHO05D001848 9.1e-06 55.5 115 33.0
Sp4g01810 Schrenkiella parvula HOM05D002243 ORTHO05D001848 9.1e-06 55.5 121 36.4
SGA_v2.0_scaffold269G46251 Striga asiatica HOM05D002243 ORTHO05D001848 9.1e-06 55.5 111 36.0


User provided reference genes

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