Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 2.4e-99 365.5 193 100.0
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 4.7e-42 175.3 195 52.8
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 8.0e-42 174.5 194 51.5
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 1.2e-40 170.6 196 53.6
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 2.6e-40 169.5 196 54.1
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 6.3e-39 164.9 195 52.3
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 1.4e-38 163.7 198 51.5
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 1.4e-38 163.7 194 51.5
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 1.4e-38 163.7 195 51.8
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 3.1e-38 162.5 189 51.3
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 9.1e-38 161.0 194 51.5
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 7.7e-37 157.9 194 49.0
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 1.0e-36 157.5 194 49.5
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 8.6e-36 154.5 194 50.0
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 1.1e-35 154.1 191 48.2
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.9e-35 153.3 191 46.1
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 3.3e-35 152.5 197 47.7
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 5.5e-35 151.8 191 47.1
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 9.5e-35 151.0 194 47.4
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 1.2e-34 150.6 194 47.4
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 1.6e-34 150.2 195 48.7
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 1.6e-34 150.2 220 47.3
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 2.1e-34 149.8 194 47.9
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 2.1e-34 149.8 195 48.2
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 6.1e-34 148.3 190 44.7
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 1.4e-33 147.1 194 46.9
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 1.8e-33 146.7 194 45.4
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 3.0e-33 146.0 194 46.9
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 3.0e-33 146.0 191 46.6
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 4.0e-33 145.6 197 44.2
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 4.0e-33 145.6 198 48.0
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 5.2e-33 145.2 191 46.6
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 6.8e-33 144.8 194 45.9
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 1.2e-32 144.1 198 47.5
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 1.5e-32 143.7 196 45.4
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 1.5e-32 143.7 199 47.2
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 1.5e-32 143.7 195 47.2
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 1.5e-32 143.7 194 45.9
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 2.0e-32 143.3 196 45.4
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 2.6e-32 142.9 225 44.4
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 3.4e-32 142.5 196 47.4
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 4.4e-32 142.1 194 45.4
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 4.4e-32 142.1 194 45.9
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 4.4e-32 142.1 194 47.4
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 7.5e-32 141.4 191 45.0
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 7.5e-32 141.4 197 44.7
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 9.8e-32 141.0 193 45.6
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 9.8e-32 141.0 202 44.1
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 9.8e-32 141.0 195 46.2
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 1.3e-31 140.6 198 47.0
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 1.3e-31 140.6 195 46.2
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 1.7e-31 140.2 194 43.3
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 2.2e-31 139.8 194 45.9
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 2.2e-31 139.8 229 41.0
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 2.8e-31 139.4 196 46.9
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 2.8e-31 139.4 196 46.9
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 2.8e-31 139.4 194 45.4
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 3.7e-31 139.0 196 46.4
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 3.7e-31 139.0 196 46.4
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 3.7e-31 139.0 196 46.4
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 3.7e-31 139.0 198 46.0
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 3.7e-31 139.0 193 44.6
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.7e-31 139.0 194 46.9
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 3.7e-31 139.0 191 46.6
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 4.9e-31 138.7 194 43.8
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 4.9e-31 138.7 194 46.4
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 8.3e-31 137.9 198 46.5
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 8.3e-31 137.9 198 45.5
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 8.3e-31 137.9 194 43.3
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 1.1e-30 137.5 194 44.3
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 1.4e-30 137.1 191 45.5
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.4e-30 137.1 194 46.4
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 1.8e-30 136.7 197 44.7
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 1.8e-30 136.7 191 42.4
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 2.4e-30 136.3 194 45.9
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 2.4e-30 136.3 191 43.5
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.2e-30 136.0 173 44.5
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 4.1e-30 135.6 194 42.3
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 4.1e-30 135.6 191 44.0
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 5.4e-30 135.2 198 45.5
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 7.0e-30 134.8 191 43.5
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 1.2e-29 134.0 194 44.8
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 1.6e-29 133.7 196 44.4
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 1.6e-29 133.7 197 46.2
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 2.0e-29 133.3 194 44.8
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 2.0e-29 133.3 191 44.5
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 2.7e-29 132.9 197 44.7
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 3.5e-29 132.5 195 43.1
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 3.5e-29 132.5 191 44.0
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.6e-29 132.1 191 43.5
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 4.6e-29 132.1 193 40.4
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 7.8e-29 131.3 176 47.7
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 7.8e-29 131.3 191 42.4
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 7.8e-29 131.3 197 43.1
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 1.3e-28 130.6 228 42.5
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 2.3e-28 129.8 194 41.8
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 2.3e-28 129.8 171 46.2
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.9e-28 129.4 191 42.4
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 8.6e-28 127.9 194 44.3
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 8.6e-28 127.9 192 45.3
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 1.2e-26 124.0 165 47.3
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 2.1e-26 123.2 189 42.9
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 2.8e-26 122.9 217 41.9
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 6.1e-26 121.7 205 41.5
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 6.8e-25 118.2 189 42.9
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.1e-22 110.9 151 43.0
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 1.4e-22 110.5 177 40.7
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 5.4e-22 108.6 151 42.4
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 1.2e-21 107.5 147 45.6
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 1.1e-17 94.4 156 39.1
SEGI_33031 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 6.8e-17 91.7 192 34.4
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 1.2e-16 90.9 101 52.5
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 2.7e-13 79.7 63 68.3
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 2.3e-12 76.6 176 35.8
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 4.3e-11 72.4 193 28.5
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 6.8e-09 65.1 62 56.5
Oeu041181.1 Olea europaea HOM05D004897 ORTHO05D005928 4.4e-08 62.4 102 38.2
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 1.7e-07 60.5 182 30.8


User provided reference genes

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