Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 9.3e-104 380.2 187 100.0
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 3.6e-63 245.4 135 88.1
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 1.4e-62 243.4 135 88.1
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 7.5e-61 237.7 135 86.7
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 1.4e-59 233.4 203 63.1
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 2.4e-59 232.6 207 60.4
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 2.4e-59 232.6 135 84.4
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 4.1e-59 231.9 206 61.7
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 4.1e-59 231.9 135 82.2
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 4.1e-59 231.9 135 84.4
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 5.3e-59 231.5 135 84.4
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 9.1e-59 230.7 135 84.4
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 9.1e-59 230.7 135 83.7
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 9.1e-59 230.7 135 83.7
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 1.2e-58 230.3 135 83.7
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 3.5e-58 228.8 135 80.7
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 3.5e-58 228.8 134 83.6
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 5.9e-58 228.0 135 83.7
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 5.9e-58 228.0 135 80.0
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 5.9e-58 228.0 135 83.7
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 1.0e-57 227.3 135 79.3
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 1.0e-57 227.3 135 83.7
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 1.3e-57 226.9 135 83.0
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 1.3e-57 226.9 135 83.0
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.3e-57 226.9 135 83.0
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 2.2e-57 226.1 134 83.6
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 2.9e-57 225.7 210 59.5
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 2.9e-57 225.7 147 77.6
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 5.0e-57 224.9 135 83.0
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 8.5e-57 224.2 135 81.5
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 8.5e-57 224.2 135 83.7
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 1.1e-56 223.8 135 82.2
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.1e-56 223.8 206 58.3
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 1.5e-56 223.4 134 82.8
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 1.5e-56 223.4 135 78.5
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 2.5e-56 222.6 134 82.8
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 3.2e-56 222.2 135 81.5
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 3.2e-56 222.2 154 75.3
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 3.2e-56 222.2 134 81.3
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 3.2e-56 222.2 134 81.3
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 3.2e-56 222.2 134 81.3
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 3.2e-56 222.2 206 59.2
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 4.2e-56 221.9 134 82.8
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 4.2e-56 221.9 135 82.2
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 4.2e-56 221.9 135 82.2
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 4.2e-56 221.9 135 80.7
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 4.2e-56 221.9 135 81.5
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 4.2e-56 221.9 206 58.7
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 4.2e-56 221.9 205 58.5
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 5.5e-56 221.5 135 81.5
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.2e-56 221.1 134 80.6
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 9.4e-56 220.7 135 78.5
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 1.2e-55 220.3 135 81.5
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 1.2e-55 220.3 135 80.7
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.2e-55 220.3 205 58.5
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 1.6e-55 219.9 153 74.5
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 1.6e-55 219.9 135 80.0
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 1.6e-55 219.9 135 80.0
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 2.1e-55 219.5 135 80.7
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 2.1e-55 219.5 135 80.7
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 2.1e-55 219.5 135 80.7
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 2.1e-55 219.5 205 60.0
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 2.7e-55 219.2 135 80.7
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 2.7e-55 219.2 135 79.3
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 3.6e-55 218.8 135 79.3
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 3.6e-55 218.8 153 74.5
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 3.6e-55 218.8 153 73.9
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 3.6e-55 218.8 134 78.4
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 3.6e-55 218.8 143 73.4
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 3.6e-55 218.8 205 58.0
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 4.7e-55 218.4 135 80.7
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 4.7e-55 218.4 135 80.7
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 6.1e-55 218.0 135 78.5
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 6.1e-55 218.0 135 80.0
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 6.1e-55 218.0 205 59.0
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 8.0e-55 217.6 207 57.5
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 8.0e-55 217.6 134 79.1
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 1.4e-54 216.9 135 79.3
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.4e-54 216.9 156 69.9
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 1.8e-54 216.5 135 77.0
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 2.3e-54 216.1 135 79.3
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 2.3e-54 216.1 134 78.4
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 2.3e-54 216.1 139 77.0
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 3.0e-54 215.7 153 72.5
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 3.0e-54 215.7 135 78.5
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 4.0e-54 215.3 214 57.0
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 5.2e-54 214.9 135 79.3
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 8.8e-54 214.2 135 77.8
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 1.2e-53 213.8 135 77.0
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 1.2e-53 213.8 139 74.8
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 2.6e-53 212.6 135 76.3
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 2.6e-53 212.6 143 72.0
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 3.4e-53 212.2 135 77.8
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 3.4e-53 212.2 143 71.3
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 4.4e-53 211.8 135 77.0
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 4.4e-53 211.8 135 77.0
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 4.4e-53 211.8 135 77.0
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 4.4e-53 211.8 135 74.8
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 4.4e-53 211.8 135 78.5
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 4.4e-53 211.8 134 78.4
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 9.8e-53 210.7 139 74.8
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 9.8e-53 210.7 139 74.8
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 9.8e-53 210.7 143 72.0
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 2.8e-52 209.1 153 73.2
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.4e-51 206.8 143 72.7
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 1.8e-51 206.5 164 63.4
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.6e-50 203.4 143 69.9
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.5e-50 201.8 134 76.9
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 2.2e-49 199.5 143 71.3
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 3.8e-49 198.7 135 71.9
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 7.2e-48 194.5 135 68.9
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 9.4e-48 194.1 165 59.4
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.2e-47 193.7 207 50.7
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 2.7e-47 192.6 165 58.8
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 3.7e-44 182.2 135 68.9
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 8.3e-44 181.0 134 67.9
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 1.8e-43 179.9 103 85.4
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 1.0e-41 174.1 151 63.6
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 4.3e-40 168.7 258 41.9
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 8.9e-38 161.0 144 59.7
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 2.6e-37 159.5 100 79.0
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 3.5e-34 149.1 134 58.2
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 1.7e-33 146.7 122 61.5
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 2.3e-33 146.4 126 59.5
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 1.1e-32 144.1 125 58.4
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 5.6e-32 141.7 127 58.3
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 7.3e-32 141.4 97 73.2
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 9.5e-32 141.0 94 75.5
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 6.8e-30 134.8 98 67.3
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 2.6e-29 132.9 132 50.0
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 7.5e-29 131.3 161 48.4
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 1.1e-27 127.5 135 45.9
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 5.4e-27 125.2 135 46.7
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.0e-25 120.9 71 81.7
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 4.3e-24 115.5 210 39.0
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.5e-21 107.1 58 87.9
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 1.7e-12 77.0 39 89.7
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 2.9e-12 76.3 38 92.1
Cre06.g258600 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 8.4e-12 74.7 115 38.3
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 3.2e-11 72.8 38 89.5
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 2.1e-10 70.1 44 72.7
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 5.1e-09 65.5 78 52.6
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 2.1e-07 60.1 34 82.4
Ciclev10030258m.g Citrus clementina HOM05D004677 ORTHO05D005746 3.6e-07 59.3 37 75.7
arahy.Tifrunner.gnm1.ann1.WARH89 Arachis hypogaea HOM05D004677 ORTHO05D005746 6.2e-07 58.5 28 92.9
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 4.0e-06 55.8 37 70.3


User provided reference genes

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