Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g726 Utricularia gibba HOM05D004952 ORTHO05D006131 4.2e-49 197.6 93 100.0
MSTRG.25114 Avicennia marina HOM05D004952 ORTHO05D006131 9.9e-22 106.7 71 69.0
Migut.C00614 Erythranthe guttata HOM05D004952 ORTHO05D006131 9.2e-20 100.1 71 64.8
Oeu055752.1 Olea europaea HOM05D004952 ORTHO05D006131 2.3e-18 95.5 71 63.4
SalBow7G3268 Salvia bowleyana HOM05D004952 ORTHO05D006131 5.1e-18 94.4 71 59.2
SGA_v2.0_scaffold156G37306 Striga asiatica HOM05D004952 ORTHO05D006131 9.6e-17 90.1 71 59.2
Cfa003370 Carpinus fangiana HOM05D004952 ORTHO05D006131 1.2e-16 89.7 83 53.0
Haze_25582 Corylus avellana HOM05D004952 ORTHO05D006131 2.1e-16 89.0 83 53.0
Lj4C49T7 Lonicera japonica HOM05D004952 ORTHO05D006131 2.8e-16 88.6 84 51.2
Haze_17576 Corylus avellana HOM05D004952 ORTHO05D006131 3.6e-16 88.2 83 53.0
MD15G1036000 Malus domestica HOM05D004952 ORTHO05D006131 5.2e-15 84.3 70 57.1
Ciclev10000139m.g Citrus clementina HOM05D004952 ORTHO05D006131 1.5e-14 82.8 76 52.6
Eucgr.F02379 Eucalyptus grandis HOM05D004952 ORTHO05D006131 1.5e-14 82.8 84 47.6
Hma1.2p1_0260F.1_g104650 Hydrangea macrophylla HOM05D004952 ORTHO05D006131 2.0e-14 82.4 70 57.1
CiPaw.16G049700 Carya illinoinensis HOM05D004952 ORTHO05D006131 2.6e-14 82.0 83 50.6
Actinidia03540 Actinidia chinensis HOM05D004952 ORTHO05D006131 4.4e-14 81.3 71 57.7
CANSAT25G3148 Cannabis sativa HOM05D004952 ORTHO05D006131 4.4e-14 81.3 71 53.5
Cpa.g.sc64.8 Carica papaya HOM05D004952 ORTHO05D006131 4.4e-14 81.3 70 58.6
vmacro02786 Vaccinium macrocarpon HOM05D004952 ORTHO05D006131 5.8e-14 80.9 76 51.3
DCAR_008784 Daucus carota HOM05D004952 ORTHO05D006131 9.9e-14 80.1 84 44.0
RcHm_v2.0_Chr6g0299841 Rosa chinensis HOM05D004952 ORTHO05D006131 9.9e-14 80.1 83 48.2
Atru.chr13.612 Acer truncatum HOM05D004952 ORTHO05D006131 1.3e-13 79.7 72 52.8
ClCG05G019550 Citrullus lanatus HOM05D004952 ORTHO05D006131 1.3e-13 79.7 80 51.2
TWI36G1022 Tripterygium wilfordii HOM05D004952 ORTHO05D006131 1.3e-13 79.7 71 56.3
QL02p006188 Quercus lobata HOM05D004952 ORTHO05D006131 1.7e-13 79.3 70 54.3
GSVIVG01009573001 Vitis vinifera HOM05D004952 ORTHO05D006131 1.7e-13 79.3 70 55.7
CAN.G371.63 Capsicum annuum HOM05D004952 ORTHO05D006131 4.9e-13 77.8 71 52.1
Rhsim13G0049200 Rhododendron simsii HOM05D004952 ORTHO05D006131 6.4e-13 77.4 76 48.7
Sed0020372 Sechium edule HOM05D004952 ORTHO05D006131 6.4e-13 77.4 80 51.2
TAR625G1292 Trochodendron aralioides HOM05D004952 ORTHO05D006131 8.4e-13 77.0 79 46.8
HanXRQChr02g0059171 Helianthus annuus HOM05D004952 ORTHO05D006131 1.4e-12 76.3 71 52.1
MELO3C016726.2 Cucumis melo HOM05D004952 ORTHO05D006131 1.9e-12 75.9 80 50.0
CsaV3_4G034010 Cucumis sativus L. HOM05D004952 ORTHO05D006131 2.4e-12 75.5 80 50.0
Sc18g0002370 Simmondsia chinensis HOM05D004952 ORTHO05D006131 4.2e-12 74.7 76 51.3
PGR031G2121 Punica granatum HOM05D004952 ORTHO05D006131 7.1e-12 73.9 84 41.7
Sopen04g033000 Solanum pennellii HOM05D004952 ORTHO05D006131 7.1e-12 73.9 71 50.7
Cc10_g03830 Coffea canephora HOM05D004952 ORTHO05D006131 9.3e-12 73.6 74 48.6
Duzib114G0971 Durio zibethinus HOM05D004952 ORTHO05D006131 2.1e-11 72.4 71 45.1
PGSC0003DMG400008031 Solanum tuberosum HOM05D004952 ORTHO05D006131 2.7e-11 72.0 71 49.3
THA.LOC104813523 Tarenaya hassleriana HOM05D004952 ORTHO05D006131 2.7e-11 72.0 75 45.3
Nn6g34572 Nelumbo nucifera HOM05D004952 ORTHO05D006131 6.0e-11 70.9 70 50.0
TAR381G0370 Trochodendron aralioides HOM05D004952 ORTHO05D006131 6.0e-11 70.9 83 44.6
Solyc04g079390.3 Solanum lycopersicum HOM05D004952 ORTHO05D006131 7.8e-11 70.5 71 46.5
PSO063G1848 Papaver somniferum HOM05D004952 ORTHO05D006131 1.0e-10 70.1 71 49.3
Thecc.10G126500 Theobroma cacao HOM05D004952 ORTHO05D006131 1.0e-10 70.1 70 44.3
Aqoxy6G00884 Aquilegia oxysepala HOM05D004952 ORTHO05D006131 1.7e-10 69.3 92 40.2
FAN15G3424 Fragaria x ananassa HOM05D004952 ORTHO05D006131 1.7e-10 69.3 88 40.9
Nitab4.5_0012613g0030 Nicotiana tabacum HOM05D004952 ORTHO05D006131 1.7e-10 69.3 71 47.9
FvH4_2g40750 Fragaria vesca HOM05D004952 ORTHO05D006131 2.3e-10 68.9 83 42.2
Nitab4.5_0000068g0320 Nicotiana tabacum HOM05D004952 ORTHO05D006131 2.3e-10 68.9 71 47.9
Ah.16g107230 Amaranthus hybridus HOM05D004952 ORTHO05D006131 3.9e-10 68.2 75 48.0
COL.COLO4_06475 Corchorus olitorius HOM05D004952 ORTHO05D006131 5.1e-10 67.8 75 40.0
Gohir.A10G194100 Gossypium hirsutum HOM05D004952 ORTHO05D006131 5.1e-10 67.8 75 41.3
Peaxi162Scf01092g00128 Petunia axillaris HOM05D004952 ORTHO05D006131 8.7e-10 67.0 71 45.1
Glyma.06G036500 Glycine max HOM05D004952 ORTHO05D006131 1.1e-09 66.6 75 37.3
arahy.Tifrunner.gnm1.ann1.LUQS0S Arachis hypogaea HOM05D004952 ORTHO05D006131 1.5e-09 66.2 83 37.3
arahy.Tifrunner.gnm1.ann1.SSY1YH Arachis hypogaea HOM05D004952 ORTHO05D006131 1.5e-09 66.2 83 37.3
Gohir.D10G201200 Gossypium hirsutum HOM05D004952 ORTHO05D006131 1.5e-09 66.2 75 40.0
Gorai.011G225900 Gossypium raimondii HOM05D004952 ORTHO05D006131 1.5e-09 66.2 75 40.0
Lsat_1_v5_gn_6_69040 Lactuca sativa HOM05D004952 ORTHO05D006131 1.5e-09 66.2 72 45.8
VMungo1309G1417 Vigna mungo HOM05D004952 ORTHO05D006131 1.9e-09 65.9 75 40.0
Phvul.009G062500 Phaseolus vulgaris HOM05D004952 ORTHO05D006131 3.3e-09 65.1 75 40.0
Lalb_Chr08g0245691 Lupinus albus HOM05D004952 ORTHO05D006131 9.6e-09 63.5 70 42.9
Potri.016G000100 Populus trichocarpa HOM05D004952 ORTHO05D006131 3.6e-08 61.6 58 53.4
Sabra16G0008200 Salix brachista HOM05D004952 ORTHO05D006131 3.6e-08 61.6 58 53.4
FAN27G3039 Fragaria x ananassa HOM05D004952 ORTHO05D006131 4.8e-08 61.2 88 38.6
SEGI_09331 Sequoiadendron giganteum HOM05D004952 ORTHO05D006131 6.2e-08 60.8 82 42.7
CBR_g22067 Chara braunii HOM05D004952 ORTHO05D006131 8.1e-08 60.5 50 60.0
EL10Ac2g03413 Beta vulgaris HOM05D004952 ORTHO05D006131 1.4e-07 59.7 79 41.8
Lj1g0021809 Lotus japonicus HOM05D004952 ORTHO05D006131 1.4e-07 59.7 70 42.9
Medtr3g101230 Medicago truncatula HOM05D004952 ORTHO05D006131 4.0e-07 58.2 67 38.8
SHI13748 Sapria himalayana HOM05D004952 ORTHO05D006131 2.0e-06 55.8 62 50.0
Psat5g044920 Pisum sativum HOM05D004952 ORTHO05D006131 2.6e-06 55.5 66 40.9
ATR0706G013 Amborella trichopoda HOM05D004952 ORTHO05D006131 5.8e-06 54.3 55 45.5
BcaB02g07284 Brassica carinata HOM05D004952 ORTHO05D006131 9.9e-06 53.5 62 48.4


User provided reference genes

Program Settings