Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 1.0e-182 643.3 327 100.0
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 5.2e-126 454.9 337 68.5
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 2.4e-123 446.0 346 64.7
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 2.4e-123 446.0 346 64.7
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.7e-122 442.6 342 67.0
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 4.3e-120 435.3 328 67.1
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 4.3e-120 435.3 345 64.3
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 9.5e-120 434.1 357 61.9
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.6e-119 433.3 355 63.1
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 2.8e-119 432.6 348 64.1
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 1.2e-117 427.2 348 63.2
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 1.2e-117 427.2 345 63.2
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 3.4e-117 425.6 357 61.1
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 7.5e-117 424.5 346 62.7
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 1.7e-116 423.3 339 63.7
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 2.2e-116 422.9 373 59.8
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 4.9e-116 421.8 338 65.1
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.9e-115 419.9 348 61.5
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.2e-114 417.2 345 63.5
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 6.0e-114 414.8 345 61.4
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 6.0e-114 414.8 345 63.2
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 6.0e-114 414.8 345 63.2
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.7e-113 413.3 346 62.1
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 2.3e-113 412.9 347 60.8
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 2.3e-113 412.9 336 63.1
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 5.0e-113 411.8 356 62.9
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 1.5e-112 410.2 350 58.9
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.5e-112 410.2 350 58.9
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 2.5e-112 409.5 353 60.1
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 2.5e-112 409.5 353 60.1
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.3e-112 408.7 350 59.1
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 5.6e-112 408.3 332 63.0
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 7.3e-112 407.9 337 63.2
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 7.3e-112 407.9 357 59.4
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 9.5e-112 407.5 352 60.5
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 2.1e-111 406.4 353 59.8
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 2.1e-111 406.4 352 59.7
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 2.1e-111 406.4 324 63.6
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 2.8e-111 406.0 353 59.5
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 2.8e-111 406.0 323 61.9
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 3.6e-111 405.6 348 60.1
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 3.6e-111 405.6 346 59.5
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 3.6e-111 405.6 352 59.4
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 8.0e-111 404.4 347 59.4
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 8.0e-111 404.4 361 57.9
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 1.1e-110 404.1 352 59.4
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.1e-110 404.1 366 57.9
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 1.4e-110 403.7 352 59.4
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.4e-110 403.7 361 57.6
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.8e-110 403.3 357 57.7
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 3.1e-110 402.5 353 59.2
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.2e-109 400.6 345 58.6
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 2.0e-109 399.8 353 58.4
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 2.0e-109 399.8 348 59.5
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 4.4e-109 398.7 346 59.0
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.7e-108 396.7 343 59.5
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 2.9e-108 396.0 352 58.2
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 4.9e-108 395.2 344 58.7
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 4.9e-108 395.2 346 59.0
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 8.3e-108 394.4 341 58.1
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 9.2e-107 391.0 349 57.6
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.3e-105 387.1 337 59.1
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 6.6e-105 384.8 352 56.5
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 7.3e-104 381.3 396 51.0
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 9.5e-104 380.9 283 70.3
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 4.7e-103 378.6 343 59.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.3e-100 370.5 354 54.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 3.7e-100 369.0 323 60.1
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 5.4e-99 365.2 393 53.2
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 6.0e-98 361.7 344 54.9
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 3.9e-97 359.0 327 56.6
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.7e-95 352.1 298 62.4
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.4e-94 349.7 310 58.7
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 3.1e-94 349.4 352 52.3
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.3e-92 344.0 298 60.1
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 2.9e-92 342.8 318 55.0
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 4.9e-92 342.0 352 54.3
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 2.7e-90 336.3 328 54.9
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.0e-81 307.8 429 44.5
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.0e-81 306.2 325 52.0
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.1e-80 304.3 335 50.7
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 3.3e-80 302.8 252 63.9
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.1e-72 277.7 350 46.0
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.6e-71 273.9 272 53.3
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 9.0e-70 268.1 309 46.3
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.1e-67 261.2 174 71.3
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 2.7e-66 256.5 246 57.7
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.0e-65 254.6 351 43.9
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.8e-65 253.8 175 70.3
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 6.7e-65 251.9 301 42.2
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 3.7e-63 246.1 172 67.4
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 1.8e-62 243.8 275 53.8
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.2e-61 241.1 378 42.9
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.9e-57 226.1 174 62.1
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.1e-56 224.6 214 52.8
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 2.4e-54 216.9 231 52.8
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 6.5e-52 208.8 158 63.3
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 2.7e-50 203.4 158 65.2
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 4.3e-48 196.1 158 63.9
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 1.7e-47 194.1 282 38.7
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 2.2e-47 193.7 123 69.9
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.0e-45 187.2 108 79.6
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.4e-45 186.4 152 60.5
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 3.4e-45 186.4 152 62.5
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 8.5e-44 181.8 140 67.9
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 7.9e-42 175.3 176 57.4
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 6.3e-39 165.6 128 60.9
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 8.2e-39 165.2 133 63.2
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 3.8e-36 156.4 118 61.0
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 1.5e-35 154.5 112 62.5
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-33 147.5 124 56.5
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.3e-33 147.1 140 55.0
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 1.5e-32 144.4 94 68.1
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 4.4e-32 142.9 107 61.7
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 6.3e-31 139.0 95 71.6
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-27 127.5 134 52.2
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 2.7e-26 123.6 102 59.8
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 6.1e-26 122.5 201 44.3
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 2.3e-25 120.6 115 52.2
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 2.6e-24 117.1 75 65.3
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 2.6e-24 117.1 345 26.4
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 1.5e-19 101.3 124 41.1
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.9e-19 100.9 67 68.7
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 6.1e-18 95.9 73 63.0
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.4e-17 94.7 71 59.2
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 8.8e-17 92.0 77 59.7
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 1.1e-14 85.1 117 44.4
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.1e-11 75.1 202 28.7
MBI14_g15702_MAGBIO Magnolia biondii HOM05D006555 ORTHO05D008376 9.8e-08 62.0 310 26.5
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 1.3e-07 61.6 312 26.6
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 4.9e-07 59.7 49 57.1
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 6.4e-07 59.3 338 24.3
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 1.4e-06 58.2 324 26.5
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 9.2e-06 55.5 134 32.1


User provided reference genes

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