Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 9.4e-130 466.8 232 100.0
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.7e-62 243.4 227 53.7
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 6.4e-62 241.5 227 55.1
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 5.8e-55 218.4 227 49.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.1e-50 204.1 224 48.2
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.9e-50 203.4 252 43.7
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.8e-49 199.5 227 46.3
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 8.1e-49 198.0 220 45.5
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.8e-48 196.8 227 44.5
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.0e-47 193.4 213 46.0
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 5.8e-47 191.8 234 44.4
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 9.9e-47 191.0 221 46.6
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 4.9e-46 188.7 172 51.2
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 4.9e-46 188.7 172 51.2
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 1.1e-45 187.6 213 45.1
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 3.2e-45 186.0 224 44.2
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 2.3e-43 179.9 174 48.3
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 2.3e-43 179.9 212 42.5
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 8.7e-43 177.9 174 48.9
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 8.7e-43 177.9 210 44.8
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 7.4e-42 174.9 174 48.9
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.3e-41 174.1 229 41.9
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 2.1e-41 173.3 231 41.1
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 2.8e-41 172.9 172 45.9
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 3.7e-41 172.6 171 46.8
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 6.2e-41 171.8 174 49.4
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 8.1e-41 171.4 172 47.7
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 2.4e-40 169.9 184 41.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 2.4e-40 169.9 228 39.0
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.4e-40 169.9 179 45.8
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.1e-40 169.5 172 44.8
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.1e-40 169.5 226 38.9
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 3.1e-40 169.5 174 48.3
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 6.9e-40 168.3 174 48.3
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.2e-39 167.5 226 38.9
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.5e-39 167.2 213 42.3
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.0e-39 166.8 239 38.1
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.4e-39 166.0 239 38.9
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 4.5e-39 165.6 239 38.9
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 5.8e-39 165.2 221 38.9
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 9.9e-39 164.5 198 41.4
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 1.3e-38 164.1 198 39.9
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.2e-38 163.3 239 38.5
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.2e-38 163.3 172 43.0
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 2.2e-38 163.3 185 43.2
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 6.4e-38 161.8 170 42.9
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 6.4e-38 161.8 198 40.9
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.4e-37 160.6 198 39.4
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.2e-37 159.5 179 45.8
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 5.5e-37 158.7 172 43.0
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.1e-37 158.3 175 41.7
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.6e-36 157.1 173 45.1
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.6e-36 157.1 179 45.3
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 2.1e-36 156.8 175 41.1
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 3.5e-36 156.0 210 38.6
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 6.0e-36 155.2 230 37.0
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.3e-35 154.1 217 34.6
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.3e-35 153.3 175 42.9
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 5.1e-35 152.1 174 41.4
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 5.1e-35 152.1 170 41.8
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 5.1e-35 152.1 170 41.8
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 6.7e-35 151.8 172 41.9
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 8.7e-35 151.4 182 40.7
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 8.7e-35 151.4 172 40.7
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.9e-34 150.2 225 37.8
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 2.5e-34 149.8 175 40.6
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.5e-34 149.8 170 41.2
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 2.5e-34 149.8 199 40.2
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 3.3e-34 149.4 176 42.0
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 3.3e-34 149.4 186 38.7
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.6e-33 147.1 199 40.2
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 2.1e-33 146.7 169 40.8
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 1.8e-32 143.7 130 50.0
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 3.1e-32 142.9 170 42.4
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 3.1e-32 142.9 172 39.5
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 4.0e-32 142.5 202 40.1
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 5.3e-32 142.1 174 40.2
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 9.0e-32 141.4 170 42.4
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.2e-31 141.0 170 41.8
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.5e-31 140.6 170 41.8
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 2.0e-31 140.2 218 37.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 2.6e-31 139.8 197 37.6
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 1.0e-30 137.9 230 35.7
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.3e-30 137.5 170 41.2
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.9e-29 133.7 198 37.4
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.5e-29 133.3 205 37.6
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 9.3e-29 131.3 199 36.7
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.2e-28 131.0 176 38.1
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.5e-26 124.0 128 46.1
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 2.8e-25 119.8 176 35.8
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.5e-23 112.5 82 61.0
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.6e-20 104.0 135 40.0
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 6.1e-20 102.1 114 43.9
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.1e-18 97.8 138 38.4
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 5.3e-16 89.0 123 35.0
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 6.9e-16 88.6 119 38.7
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 7.7e-15 85.1 70 51.4
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 8.5e-14 81.6 200 27.0
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 5.5e-13 79.0 88 45.5
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 6.1e-12 75.5 210 28.6
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.8e-11 73.9 92 31.5
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.5e-10 70.9 105 34.3
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 2.6e-10 70.1 104 34.6
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.5e-07 59.3 62 45.2
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.9e-06 56.6 65 38.5
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 2.9e-06 56.6 74 40.5


User provided reference genes

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