Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.5e-92 342.8 167 100.0
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.5e-36 156.8 153 55.6
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 1.5e-33 146.7 165 54.5
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 3.8e-32 142.1 153 56.2
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 7.2e-31 137.9 167 53.3
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 3.0e-29 132.5 140 55.7
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 5.7e-28 128.3 177 48.6
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 3.7e-27 125.6 117 55.6
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 4.8e-27 125.2 160 51.2
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.4e-26 123.6 96 64.6
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.8e-26 123.2 110 56.4
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 3.1e-26 122.5 114 57.9
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 3.1e-26 122.5 130 51.5
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.1e-26 122.5 112 57.1
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 4.1e-26 122.1 114 57.9
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 5.3e-26 121.7 112 56.2
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 5.3e-26 121.7 104 60.6
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 5.3e-26 121.7 104 60.6
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 6.9e-26 121.3 161 46.6
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 6.9e-26 121.3 108 63.0
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 6.9e-26 121.3 102 66.7
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 9.1e-26 120.9 90 67.8
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 1.2e-25 120.6 94 61.7
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 1.5e-25 120.2 157 50.3
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 2.6e-25 119.4 111 55.9
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.6e-25 119.4 117 54.7
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 4.5e-25 118.6 69 79.7
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 4.5e-25 118.6 108 56.5
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.5e-25 118.6 150 49.3
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 5.9e-25 118.2 83 68.7
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 7.7e-25 117.9 130 50.8
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 1.3e-24 117.1 119 53.8
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 1.3e-24 117.1 119 53.8
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 1.3e-24 117.1 81 69.1
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.3e-24 117.1 87 63.2
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.3e-24 117.1 87 63.2
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.3e-24 117.1 163 47.9
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 1.3e-24 117.1 105 63.8
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.7e-24 116.7 102 64.7
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 3.8e-24 115.5 101 61.4
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 5.0e-24 115.2 109 59.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 5.0e-24 115.2 70 74.3
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 5.0e-24 115.2 59 91.5
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 6.5e-24 114.8 124 57.3
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 6.5e-24 114.8 63 84.1
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 6.5e-24 114.8 80 66.2
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 8.5e-24 114.4 126 54.8
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 8.5e-24 114.4 71 73.2
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 1.1e-23 114.0 120 53.3
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 1.1e-23 114.0 99 58.6
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 1.1e-23 114.0 110 58.2
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 1.1e-23 114.0 80 66.2
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 1.1e-23 114.0 91 61.5
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 1.1e-23 114.0 162 46.3
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.4e-23 113.6 120 53.3
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 1.4e-23 113.6 110 55.5
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.9e-23 113.2 93 64.5
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 1.9e-23 113.2 129 51.2
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.9e-23 113.2 104 60.6
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.9e-23 113.2 90 61.1
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 1.9e-23 113.2 81 71.6
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.9e-23 113.2 80 65.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.9e-23 113.2 84 65.5
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 2.5e-23 112.8 84 63.1
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 2.5e-23 112.8 109 53.2
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.5e-23 112.8 109 53.2
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 2.5e-23 112.8 83 65.1
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 2.5e-23 112.8 78 71.8
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 3.2e-23 112.5 67 76.1
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 3.2e-23 112.5 67 76.1
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 4.2e-23 112.1 84 65.5
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 5.5e-23 111.7 81 69.1
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 5.5e-23 111.7 111 56.8
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 5.5e-23 111.7 111 56.8
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 5.5e-23 111.7 61 85.2
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 5.5e-23 111.7 80 67.5
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.2e-22 110.5 86 64.0
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 1.6e-22 110.2 84 63.1
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 1.6e-22 110.2 78 69.2
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.6e-22 110.2 109 53.2
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.6e-22 110.2 100 59.0
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 2.1e-22 109.8 84 63.1
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 3.6e-22 109.0 122 52.5
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 6.1e-22 108.2 71 74.6
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 8.0e-22 107.8 59 83.1
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.4e-21 107.1 69 72.5
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 1.8e-21 106.7 71 67.6
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 2.3e-21 106.3 67 74.6
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 3.0e-21 105.9 78 65.4
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.0e-21 105.9 64 75.0
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.0e-21 105.9 174 42.0
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 3.0e-21 105.9 62 80.6
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 3.9e-21 105.5 99 55.6
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.1e-20 104.0 64 75.0
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.1e-20 104.0 62 75.8
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.5e-20 103.6 62 77.4
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 4.4e-20 102.1 117 47.9
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 3.7e-19 99.0 61 72.1
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 1.1e-18 97.4 80 58.8
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 1.4e-18 97.1 60 73.3
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 2.4e-18 96.3 60 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 4.5e-17 92.0 74 59.5
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 4.5e-17 92.0 62 67.7
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 5.0e-16 88.6 73 60.3
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.1e-15 87.4 85 49.4
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.9e-15 86.7 63 58.7
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.9e-15 86.7 82 53.7
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.2e-15 85.9 78 57.7
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 3.2e-15 85.9 57 66.7
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 4.0e-13 79.0 59 61.0
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 5.2e-13 78.6 61 54.1
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 8.2e-11 71.2 44 72.7
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.4e-10 70.5 40 82.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.2e-09 67.4 50 68.0
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.9e-07 60.1 47 55.3
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.9e-07 60.1 47 55.3
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.2e-07 59.3 59 44.1


User provided reference genes

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