Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 1.6e-39 165.6 82 100.0
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 5.4e-24 114.0 74 71.6
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 1.3e-22 109.4 73 71.2
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.9e-21 105.5 80 66.2
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 3.3e-21 104.8 80 66.2
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 3.3e-21 104.8 76 69.7
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 3.3e-21 104.8 76 69.7
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 4.3e-21 104.4 82 63.4
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 9.6e-21 103.2 70 67.1
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 9.6e-21 103.2 73 67.1
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 1.3e-20 102.8 70 65.7
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.6e-20 102.4 71 69.0
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 2.1e-20 102.1 69 71.0
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 2.1e-20 102.1 81 65.4
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 2.1e-20 102.1 69 71.0
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 3.7e-20 101.3 82 59.8
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 3.7e-20 101.3 79 65.8
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 3.7e-20 101.3 65 73.8
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 6.2e-20 100.5 68 70.6
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.1e-19 99.8 69 69.6
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.1e-19 99.8 69 66.7
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 1.4e-19 99.4 70 68.6
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 1.4e-19 99.4 81 60.5
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 1.8e-19 99.0 73 65.8
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 4.0e-19 97.8 71 64.8
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 4.0e-19 97.8 69 65.2
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 4.0e-19 97.8 82 61.0
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 5.3e-19 97.4 74 62.2
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 6.9e-19 97.1 82 61.0
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 9.0e-19 96.7 73 60.3
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 1.2e-18 96.3 69 65.2
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.2e-18 96.3 74 60.8
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 2.0e-18 95.5 71 60.6
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 2.0e-18 95.5 82 61.0
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 2.6e-18 95.1 70 65.7
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 3.4e-18 94.7 71 62.0
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 4.5e-18 94.4 69 62.3
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 4.5e-18 94.4 74 60.8
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 4.5e-18 94.4 71 62.0
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 5.8e-18 94.0 68 61.8
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 7.6e-18 93.6 68 66.2
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 7.6e-18 93.6 80 62.5
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 1.0e-17 93.2 78 57.7
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 1.7e-17 92.4 71 63.4
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 2.2e-17 92.0 66 66.7
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 2.9e-17 91.7 69 63.8
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 6.5e-17 90.5 73 57.5
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 6.5e-17 90.5 71 59.2
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 6.5e-17 90.5 69 59.4
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 6.5e-17 90.5 72 65.3
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 8.4e-17 90.1 71 57.7
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 8.4e-17 90.1 80 55.0
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 8.4e-17 90.1 71 62.0
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 1.1e-16 89.7 80 55.0
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 1.1e-16 89.7 69 60.9
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 1.4e-16 89.4 73 56.2
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 1.9e-16 89.0 71 56.3
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 1.9e-16 89.0 71 57.7
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 1.9e-16 89.0 71 57.7
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.9e-16 89.0 71 56.3
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 2.5e-16 88.6 68 60.3
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 3.2e-16 88.2 68 61.8
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 5.5e-16 87.4 71 56.3
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 5.5e-16 87.4 71 56.3
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 7.1e-16 87.0 73 54.8
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 7.1e-16 87.0 64 64.1
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 7.1e-16 87.0 72 56.9
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 7.1e-16 87.0 64 62.5
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 9.3e-16 86.7 81 53.1
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.2e-15 86.3 59 67.8
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.2e-15 86.3 66 62.1
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 1.2e-15 86.3 74 58.1
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 2.7e-15 85.1 72 62.5
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 3.5e-15 84.7 72 58.3
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 3.5e-15 84.7 66 60.6
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 1.3e-14 82.8 64 65.6
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.8e-14 82.4 78 55.1
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 6.7e-14 80.5 63 58.7
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 1.1e-13 79.7 71 52.1
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 1.5e-13 79.3 72 48.6
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 3.3e-13 78.2 69 50.7
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 5.7e-13 77.4 61 55.7
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 5.7e-13 77.4 61 55.7
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 5.7e-13 77.4 70 55.7
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 7.4e-13 77.0 55 61.8
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 7.4e-13 77.0 55 61.8
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 3.7e-12 74.7 56 64.3
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 4.8e-12 74.3 50 70.0
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 4.8e-12 74.3 51 62.7
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 6.2e-12 73.9 49 71.4
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 6.2e-12 73.9 69 53.6
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 8.2e-12 73.6 51 66.7
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 1.1e-11 73.2 66 56.1
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 2.4e-11 72.0 54 66.7
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 3.1e-11 71.6 52 55.8
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 6.9e-11 70.5 62 50.0
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.4e-10 68.2 62 46.8
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 7.6e-10 67.0 57 56.1
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 1.7e-09 65.9 45 57.8
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 5.0e-09 64.3 54 57.4
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 2.3e-06 55.5 51 54.9


User provided reference genes

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