Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g65 Utricularia gibba HOM05D005605 ORTHO05D007615 1.6e-225 786.2 524 100.0
Migut.B00234 Erythranthe guttata HOM05D005605 ORTHO05D007615 2.8e-113 413.3 480 70.6
Oeu015995.1 Olea europaea HOM05D005605 ORTHO05D007615 3.1e-104 383.3 473 66.6
MSTRG.20083 Avicennia marina HOM05D005605 ORTHO05D007615 1.3e-97 361.3 519 62.6
PGSC0003DMG400000727 Solanum tuberosum HOM05D005605 ORTHO05D007615 9.9e-95 351.7 502 61.8
CAN.G1412.8 Capsicum annuum HOM05D005605 ORTHO05D007615 4.9e-94 349.4 499 61.5
Solyc01g109630.4 Solanum lycopersicum HOM05D005605 ORTHO05D007615 2.4e-93 347.1 509 61.3
Sopen01g051820 Solanum pennellii HOM05D005605 ORTHO05D007615 4.2e-93 346.3 460 64.8
Peaxi162Scf00016g00735 Petunia axillaris HOM05D005605 ORTHO05D007615 4.3e-90 336.3 301 56.5
CiPaw.05G064700 Carya illinoinensis HOM05D005605 ORTHO05D007615 2.8e-89 333.6 472 64.8
CSS0012215 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 3.7e-89 333.2 417 71.5
CSS0037419 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 3.7e-89 333.2 417 71.5
Eucgr.I01271 Eucalyptus grandis HOM05D005605 ORTHO05D007615 2.4e-88 330.5 348 51.4
CsaV3_7G023590 Cucumis sativus L. HOM05D005605 ORTHO05D007615 9.9e-87 325.1 513 59.6
Lsat_1_v5_gn_1_111380 Lactuca sativa HOM05D005605 ORTHO05D007615 1.3e-86 324.7 356 50.8
MELO3C012521.2 Cucumis melo HOM05D005605 ORTHO05D007615 3.8e-86 323.2 462 63.4
Sed0006971 Sechium edule HOM05D005605 ORTHO05D007615 3.8e-86 323.2 507 58.8
Glyma.12G043100 Glycine max HOM05D005605 ORTHO05D007615 1.9e-85 320.9 461 63.1
Cc02_g17560 Coffea canephora HOM05D005605 ORTHO05D007615 3.2e-85 320.1 363 75.5
Prupe.8G096600 Prunus persica HOM05D005605 ORTHO05D007615 3.2e-85 320.1 514 61.7
ClCG02G005000 Citrullus lanatus HOM05D005605 ORTHO05D007615 7.1e-85 318.9 511 58.7
CANSAT01G2366 Cannabis sativa HOM05D005605 ORTHO05D007615 1.3e-83 314.7 460 63.7
QL11p043893 Quercus lobata HOM05D005605 ORTHO05D007615 1.3e-83 314.7 311 52.4
Gohir.A13G034200 Gossypium hirsutum HOM05D005605 ORTHO05D007615 1.8e-83 314.3 513 58.9
TAR628G1411 Trochodendron aralioides HOM05D005605 ORTHO05D007615 2.3e-83 313.9 315 52.4
Hma1.2p1_0066F.1_g036390 Hydrangea macrophylla HOM05D005605 ORTHO05D007615 3.0e-83 313.5 424 65.3
MD05G1066000 Malus domestica HOM05D005605 ORTHO05D007615 6.7e-83 312.4 506 58.9
Potri.009G116200 Populus trichocarpa HOM05D005605 ORTHO05D007615 1.9e-82 310.8 465 63.2
THA.LOC104824826 Tarenaya hassleriana HOM05D005605 ORTHO05D007615 3.3e-82 310.1 477 62.3
FvH4_2g08810 Fragaria vesca HOM05D005605 ORTHO05D007615 4.3e-82 309.7 506 62.1
TWI31G1015 Tripterygium wilfordii HOM05D005605 ORTHO05D007615 4.3e-82 309.7 460 63.7
VMungo1127G2130 Vigna mungo HOM05D005605 ORTHO05D007615 4.3e-82 309.7 466 63.3
Lj5C196G6 Lonicera japonica HOM05D005605 ORTHO05D007615 5.6e-82 309.3 454 59.5
RcHm_v2.0_Chr6g0264281 Rosa chinensis HOM05D005605 ORTHO05D007615 9.6e-82 308.5 456 65.6
FAN20G2643 Fragaria x ananassa HOM05D005605 ORTHO05D007615 2.8e-81 307.0 454 66.3
Gohir.D13G032600 Gossypium hirsutum HOM05D005605 ORTHO05D007615 2.8e-81 307.0 416 67.5
Gorai.013G037000 Gossypium raimondii HOM05D005605 ORTHO05D007615 2.8e-81 307.0 416 67.5
Hund00267 Selenicereus undatus HOM05D005605 ORTHO05D007615 2.8e-81 307.0 459 64.7
FAN15G0883 Fragaria x ananassa HOM05D005605 ORTHO05D007615 4.8e-81 306.2 506 61.9
CSS0010527 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 1.1e-80 305.1 308 54.2
DCAR_001580 Daucus carota HOM05D005605 ORTHO05D007615 1.4e-80 304.7 304 52.3
Nitab4.5_0004172g0020 Nicotiana tabacum HOM05D005605 ORTHO05D007615 1.8e-80 304.3 370 47.0
Phvul.011G045100 Phaseolus vulgaris HOM05D005605 ORTHO05D007615 1.8e-80 304.3 308 52.3
arahy.Tifrunner.gnm1.ann1.XL89DC Arachis hypogaea HOM05D005605 ORTHO05D007615 2.4e-80 303.9 472 61.9
CSS0044100 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 3.1e-80 303.5 308 53.9
ECA248G2826 Erigeron canadensis HOM05D005605 ORTHO05D007615 3.1e-80 303.5 405 67.2
FAN24G2665 Fragaria x ananassa HOM05D005605 ORTHO05D007615 4.0e-80 303.1 506 61.7
HanXRQChr11g0343841 Helianthus annuus HOM05D005605 ORTHO05D007615 5.3e-80 302.8 334 49.1
A09p58000 Brassica napus HOM05D005605 ORTHO05D007615 6.9e-80 302.4 478 61.1
AL4G10940 Arabidopsis lyrata HOM05D005605 ORTHO05D007615 1.5e-79 301.2 494 59.1
Psat7g141400 Pisum sativum HOM05D005605 ORTHO05D007615 1.5e-79 301.2 456 63.4
AT2G21710 Arabidopsis thaliana HOM05D005605 ORTHO05D007615 2.6e-79 300.4 493 58.8
Carub.0004s0075 Capsella rubella HOM05D005605 ORTHO05D007615 2.6e-79 300.4 339 46.0
Haze_02388 Corylus avellana HOM05D005605 ORTHO05D007615 2.6e-79 300.4 310 49.7
Thhalv10000085m.g Eutrema salsugineum HOM05D005605 ORTHO05D007615 2.6e-79 300.4 490 59.8
BcaC07g41121 Brassica carinata HOM05D005605 ORTHO05D007615 4.5e-79 299.7 489 59.5
BolC8t51688H Brassica oleracea HOM05D005605 ORTHO05D007615 4.5e-79 299.7 489 59.5
Ca_20877_v3 Cicer arietinum L. HOM05D005605 ORTHO05D007615 5.8e-79 299.3 459 62.7
Rhsim11G0177400 Rhododendron simsii HOM05D005605 ORTHO05D007615 5.8e-79 299.3 486 60.7
Lj3g0011747 Lotus japonicus HOM05D005605 ORTHO05D007615 1.3e-78 298.1 460 60.7
BraA09t41190Z Brassica rapa HOM05D005605 ORTHO05D007615 2.2e-78 297.4 478 60.7
arahy.Tifrunner.gnm1.ann1.IZ1QNN Arachis hypogaea HOM05D005605 ORTHO05D007615 2.9e-78 297.0 476 60.5
Sp4g00860 Schrenkiella parvula HOM05D005605 ORTHO05D007615 3.8e-78 296.6 487 58.9
C08p41210 Brassica napus HOM05D005605 ORTHO05D007615 4.9e-78 296.2 489 59.1
Medtr4g070060 Medicago truncatula HOM05D005605 ORTHO05D007615 6.5e-78 295.8 453 63.1
PGR142G2567 Punica granatum HOM05D005605 ORTHO05D007615 6.5e-78 295.8 449 62.6
GSVIVG01031970001 Vitis vinifera HOM05D005605 ORTHO05D007615 1.4e-77 294.7 363 73.8
Ah.01g006280 Amaranthus hybridus HOM05D005605 ORTHO05D007615 2.5e-77 293.9 467 55.2
Sabra09G0089200 Salix brachista HOM05D005605 ORTHO05D007615 3.2e-77 293.5 465 62.2
Aa31LG7G14820 Aethionema arabicum HOM05D005605 ORTHO05D007615 9.3e-77 292.0 462 62.1
Aqoxy6G01115 Aquilegia oxysepala HOM05D005605 ORTHO05D007615 9.3e-77 292.0 420 66.7
Glyma.11G117700 Glycine max HOM05D005605 ORTHO05D007615 1.6e-76 291.2 309 49.8
TPR.G19396 Trifolium pratense HOM05D005605 ORTHO05D007615 2.7e-76 290.4 461 60.5
BcaB08g35002 Brassica carinata HOM05D005605 ORTHO05D007615 4.6e-76 289.7 324 46.6
Cpa.g.sc62.154 Carica papaya HOM05D005605 ORTHO05D007615 4.6e-76 289.7 320 50.3
Cfa005000 Carpinus fangiana HOM05D005605 ORTHO05D007615 4.3e-74 283.1 361 69.3
Sc18g0004450 Simmondsia chinensis HOM05D005605 ORTHO05D007615 9.7e-74 282.0 451 63.4
MBI02_g03744_MAGBIO Magnolia biondii HOM05D005605 ORTHO05D007615 1.6e-73 281.2 489 58.1
Cfa004997 Carpinus fangiana HOM05D005605 ORTHO05D007615 4.1e-72 276.6 462 59.1
ATR0772G053 Amborella trichopoda HOM05D005605 ORTHO05D007615 1.7e-70 271.2 480 59.8
Manes.17G101300 Manihot esculenta HOM05D005605 ORTHO05D007615 2.2e-70 270.8 459 60.6
Nitab4.5_0000308g0140 Nicotiana tabacum HOM05D005605 ORTHO05D007615 8.5e-70 268.9 525 47.6
COL.COLO4_25933 Corchorus olitorius HOM05D005605 ORTHO05D007615 1.1e-69 268.5 209 59.8
AUR62011322 Chenopodium quinoa HOM05D005605 ORTHO05D007615 3.2e-69 266.9 362 68.8
SGA_v2.0_scaffold58G20533 Striga asiatica HOM05D005605 ORTHO05D007615 5.1e-67 259.6 235 59.1
Haze_02444 Corylus avellana HOM05D005605 ORTHO05D007615 1.9e-66 257.7 273 49.1
PSO541G1874 Papaver somniferum HOM05D005605 ORTHO05D007615 5.7e-66 256.1 329 45.0
PSO675G3023 Papaver somniferum HOM05D005605 ORTHO05D007615 1.4e-64 251.5 269 50.2
Haze_02391 Corylus avellana HOM05D005605 ORTHO05D007615 2.0e-63 247.7 347 40.1
Cfa004998 Carpinus fangiana HOM05D005605 ORTHO05D007615 2.9e-62 243.8 188 59.0
Ciclev10028120m.g Citrus clementina HOM05D005605 ORTHO05D007615 2.9e-62 243.8 182 63.2
vmacro02103 Vaccinium macrocarpon HOM05D005605 ORTHO05D007615 5.0e-62 243.0 473 53.1
Duzib052G1004 Durio zibethinus HOM05D005605 ORTHO05D007615 6.1e-60 236.1 357 40.9
AUR62016738 Chenopodium quinoa HOM05D005605 ORTHO05D007615 5.1e-59 233.0 328 73.2
Rhsim07G0028500 Rhododendron simsii HOM05D005605 ORTHO05D007615 5.7e-58 229.6 457 34.1
EL10Ac9g21723 Beta vulgaris HOM05D005605 ORTHO05D007615 7.7e-55 219.2 290 46.9
Dinv23519 Davidia involucrata HOM05D005605 ORTHO05D007615 1.4e-51 208.4 463 56.2
Actinidia00525 Actinidia chinensis HOM05D005605 ORTHO05D007615 3.3e-50 203.8 149 67.1
Thecc.02G085000 Theobroma cacao HOM05D005605 ORTHO05D007615 1.3e-49 201.8 298 43.3
Atru.chr5.3019 Acer truncatum HOM05D005605 ORTHO05D007615 6.3e-49 199.5 201 52.2
CDE04G2564 Ceratophyllum demersum HOM05D005605 ORTHO05D007615 1.4e-48 198.4 244 46.3
Lalb_Chr03g0025671 Lupinus albus HOM05D005605 ORTHO05D007615 3.1e-48 197.2 229 50.2
Nn5g29612 Nelumbo nucifera HOM05D005605 ORTHO05D007615 7.7e-47 192.6 196 53.6
SEGI_23691 Sequoiadendron giganteum HOM05D005605 ORTHO05D007615 6.1e-44 183.0 321 35.5
CARHR112700 Cardamine hirsuta HOM05D005605 ORTHO05D007615 1.2e-42 178.7 287 72.8
BcaC07g41120 Brassica carinata HOM05D005605 ORTHO05D007615 4.2e-37 160.2 264 76.5
Haze_02436 Corylus avellana HOM05D005605 ORTHO05D007615 2.2e-33 147.9 273 34.8
Zm00001eb299540 Zea mays HOM05D005605 ORTHO05D007615 4.1e-32 143.7 252 32.5
Os07g0134700 Oryza sativa ssp. japonica HOM05D005605 ORTHO05D007615 4.5e-31 140.2 253 33.2
Haze_02447 Corylus avellana HOM05D005605 ORTHO05D007615 6.6e-30 136.3 177 40.7
HPP92_026666 Vanilla planifolia HOM05D005605 ORTHO05D007615 1.9e-29 134.8 215 40.5
AagrBONN_evm.TU.Sc2ySwM_228.1452 Anthoceros agrestis HOM05D005605 ORTHO05D007615 6.1e-28 129.8 157 42.7
Haze_02443 Corylus avellana HOM05D005605 ORTHO05D007615 4.9e-25 120.2 92 54.3
SalBow6G1488 Salvia bowleyana HOM05D002700 ORTHO05D003228 5.9e-23 113.2 130 47.7
SMO358G0083 Selaginella moellendorffii HOM05D005605 ORTHO05D007615 7.8e-23 112.8 191 34.0
MBI02_g24399_MAGBIO Magnolia biondii HOM05D005605 ORTHO05D007615 5.0e-22 110.2 92 55.4
Mapoly0073s0074 Marchantia polymorpha HOM05D005605 ORTHO05D007615 6.6e-22 109.8 191 35.1
Pp3c3_15310 Physcomitrium patens HOM05D005605 ORTHO05D007615 6.8e-19 99.8 151 33.1
Hma1.2p1_0066F.1_g036400 Hydrangea macrophylla HOM05D005605 ORTHO05D007615 9.2e-16 89.4 204 77.0
Dinv07689 Davidia involucrata HOM05D005605 ORTHO05D007615 2.3e-14 84.7 116 40.5
CDE04G1094 Ceratophyllum demersum HOM05D005605 ORTHO05D007615 4.6e-07 60.5 204 41.7
Glyma.11G117751 Glycine max HOM05D005605 ORTHO05D007615 1.0e-06 59.3 38 68.4
CDE04G2942 Ceratophyllum demersum HOM05D005605 ORTHO05D007615 5.1e-06 57.0 39 66.7


User provided reference genes

Program Settings