Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g643 Utricularia gibba HOM05D000892 ORTHO05D423715 2.9e-64 248.4 129 100.0
Oeu019667.1 Olea europaea HOM05D000892 ORTHO05D000750 3.0e-21 105.5 135 51.9
PGSC0003DMG400024030 Solanum tuberosum HOM05D000892 ORTHO05D000750 1.1e-18 97.1 131 51.9
Cc01_g20120 Coffea canephora HOM05D000892 ORTHO05D000750 1.8e-18 96.3 134 50.7
MSTRG.18199 Avicennia marina HOM05D000892 ORTHO05D000750 7.0e-18 94.4 137 51.1
SalBow3G1584 Salvia bowleyana HOM05D000892 ORTHO05D000750 2.0e-17 92.8 132 53.8
Nitab4.5_0001651g0080 Nicotiana tabacum HOM05D000892 ORTHO05D000750 1.0e-16 90.5 124 47.6
Nitab4.5_0003831g0030 Nicotiana tabacum HOM05D000892 ORTHO05D000750 2.3e-16 89.4 130 49.2
Oeu002700.1 Olea europaea HOM05D000892 ORTHO05D000750 1.9e-15 86.3 136 45.6
Migut.D00236 Erythranthe guttata HOM05D000892 ORTHO05D000750 9.5e-15 84.0 137 45.3
Nitab4.5_0002093g0120 Nicotiana tabacum HOM05D000892 ORTHO05D000750 9.5e-15 84.0 130 48.5
Peaxi162Scf01039g00238 Petunia axillaris HOM05D000892 ORTHO05D000750 1.6e-14 83.2 136 47.1
Sopen09g029180 Solanum pennellii HOM05D000892 ORTHO05D000750 2.1e-14 82.8 120 46.7
Peaxi162Scf00017g00318 Petunia axillaris HOM05D000892 ORTHO05D000750 4.7e-14 81.6 120 47.5
PGSC0003DMG400016852 Solanum tuberosum HOM05D000892 ORTHO05D000750 8.0e-14 80.9 116 47.4
Nitab4.5_0009496g0020 Nicotiana tabacum HOM05D000892 ORTHO05D000750 1.8e-13 79.7 122 45.9
CAN.G1095.27 Capsicum annuum HOM05D005258 ORTHO05D006525 5.2e-13 78.2 108 50.9
Atru.chr5.1292 Acer truncatum HOM05D000892 ORTHO05D000750 6.8e-13 77.8 135 45.2
Sopen06g035840 Solanum pennellii HOM05D000892 ORTHO05D000750 6.8e-13 77.8 124 47.6
Solyc09g074340.3 Solanum lycopersicum HOM05D000892 ORTHO05D000750 1.2e-12 77.0 108 50.0
Solyc06g084450.4 Solanum lycopersicum HOM05D000892 ORTHO05D000750 2.6e-12 75.9 137 46.0
CAN.G426.11 Capsicum annuum HOM05D000892 ORTHO05D000750 9.8e-12 73.9 120 43.3
MSTRG.17425 Avicennia marina HOM05D000892 ORTHO05D000750 1.3e-11 73.6 112 44.6
SGA_v2.0_scaffold1G00426 Striga asiatica HOM05D000892 ORTHO05D000750 6.4e-11 71.2 130 46.9
Lj1A40T79 Lonicera japonica HOM05D000892 ORTHO05D000750 8.3e-11 70.9 137 41.6
Duzib138G0135 Durio zibethinus HOM05D000892 ORTHO05D000750 4.1e-10 68.6 131 44.3
Eucgr.K03427 Eucalyptus grandis HOM05D000892 ORTHO05D000750 1.2e-09 67.0 137 39.4
Cfa006052 Carpinus fangiana HOM05D000892 ORTHO05D000750 2.0e-09 66.2 136 41.9
Haze_04800 Corylus avellana HOM05D000892 ORTHO05D000750 1.3e-08 63.5 135 39.3
Thecc.01G289200 Theobroma cacao HOM05D000892 ORTHO05D000750 1.7e-08 63.2 133 42.1
COL.COLO4_08040 Corchorus olitorius HOM05D000892 ORTHO05D000750 1.1e-07 60.5 139 38.1
Migut.N02121 Erythranthe guttata HOM05D000892 ORTHO05D000750 1.1e-07 60.5 106 42.5
VMungo0720G1688 Vigna mungo HOM05D000892 ORTHO05D000750 1.9e-07 59.7 130 42.3
CiPaw.07G098800 Carya illinoinensis HOM05D000892 ORTHO05D000750 2.5e-07 59.3 134 38.8
QL12p023813 Quercus lobata HOM05D000892 ORTHO05D000750 5.6e-07 58.2 101 44.6
Dinv32985 Davidia involucrata HOM05D000892 ORTHO05D000750 9.5e-07 57.4 140 38.6
Ciclev10019937m.g Citrus clementina HOM05D000892 ORTHO05D000750 1.2e-06 57.0 141 39.0
Dinv11288 Davidia involucrata HOM05D000892 ORTHO05D000750 1.6e-06 56.6 123 39.8
MD11G1296900 Malus domestica HOM05D000892 ORTHO05D000750 2.8e-06 55.8 137 39.4
CSS0003223 Camellia sinensis var. sinensis HOM05D000892 ORTHO05D000750 3.6e-06 55.5 137 40.1
Phvul.007G167100 Phaseolus vulgaris HOM05D000892 ORTHO05D000750 3.6e-06 55.5 123 41.5


User provided reference genes

Program Settings