Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g585 Utricularia gibba HOM05D002512 ORTHO05D002660 1.1e-81 306.6 156 100.0
unitig_744.g24147 Utricularia gibba HOM05D002512 ORTHO05D002660 2.2e-34 149.4 140 51.4
SalBow6G1865 Salvia bowleyana HOM05D002512 ORTHO05D002660 3.0e-31 139.0 128 53.1
SalBow6G6590 Salvia bowleyana HOM05D002512 ORTHO05D002660 3.0e-31 139.0 130 51.5
Oeu052783.1 Olea europaea HOM05D002512 ORTHO05D002660 1.3e-29 133.7 127 51.2
MSTRG.19737 Avicennia marina HOM05D002512 ORTHO05D002660 4.8e-29 131.7 129 51.2
Lj1P1071T51 Lonicera japonica HOM05D002512 ORTHO05D002660 2.3e-23 112.8 139 44.6
Thecc.05G241400 Theobroma cacao HOM05D002512 ORTHO05D002660 6.7e-23 111.3 119 42.9
Dinv25040 Davidia involucrata HOM05D002512 ORTHO05D002660 1.1e-22 110.5 134 43.3
Lj1g0005164 Lotus japonicus HOM05D002512 ORTHO05D002660 1.5e-22 110.2 116 43.1
Glyma.16G035700 Glycine max HOM05D002512 ORTHO05D002660 2.6e-22 109.4 142 38.0
Duzib177G1178 Durio zibethinus HOM05D002512 ORTHO05D002660 3.3e-22 109.0 119 42.0
TWI32G0450 Tripterygium wilfordii HOM05D002512 ORTHO05D002660 4.4e-22 108.6 122 46.7
TAR636G0986 Trochodendron aralioides HOM05D002512 ORTHO05D002660 4.4e-22 108.6 122 45.1
Prupe.7G015900 Prunus persica HOM05D002512 ORTHO05D002660 5.7e-22 108.2 133 39.1
Glyma.19G117400 Glycine max HOM05D002512 ORTHO05D002660 7.4e-22 107.8 142 36.6
CSS0036102 Camellia sinensis var. sinensis HOM05D002512 ORTHO05D002660 9.7e-22 107.5 119 45.4
CSS0046392 Camellia sinensis var. sinensis HOM05D002512 ORTHO05D002660 9.7e-22 107.5 119 45.4
DCAR_013490 Daucus carota HOM05D002512 ORTHO05D002660 1.3e-21 107.1 129 44.2
Potri.013G066100 Populus trichocarpa HOM05D002512 ORTHO05D002660 1.3e-21 107.1 116 46.6
Sabra19G0050700 Salix brachista HOM05D002512 ORTHO05D002660 1.3e-21 107.1 146 42.5
Gorai.007G254200 Gossypium raimondii HOM05D002512 ORTHO05D002660 1.7e-21 106.7 118 43.2
Potri.019G040500 Populus trichocarpa HOM05D002512 ORTHO05D002660 2.8e-21 105.9 116 45.7
Gohir.A11G228100 Gossypium hirsutum HOM05D002512 ORTHO05D002660 3.7e-21 105.5 118 42.4
Lalb_Chr22g0358631 Lupinus albus HOM05D002512 ORTHO05D002660 3.7e-21 105.5 139 38.1
Psat1g089520 Pisum sativum HOM05D002512 ORTHO05D002660 3.7e-21 105.5 126 36.5
TPR.G34796 Trifolium pratense HOM05D002512 ORTHO05D002660 3.7e-21 105.5 118 43.2
Cfa017720 Carpinus fangiana HOM05D002512 ORTHO05D002660 4.8e-21 105.1 116 40.5
Gohir.D11G240600 Gossypium hirsutum HOM05D002512 ORTHO05D002660 6.3e-21 104.8 118 42.4
COL.COLO4_20091 Corchorus olitorius HOM05D002512 ORTHO05D002660 8.2e-21 104.4 116 45.7
Medtr7g086710 Medicago truncatula HOM05D002512 ORTHO05D002660 8.2e-21 104.4 121 39.7
Ca_08317_v3 Cicer arietinum L. HOM05D002512 ORTHO05D002660 1.1e-20 104.0 115 43.5
SalBow1G8109 Salvia bowleyana HOM05D002512 ORTHO05D002660 1.1e-20 104.0 131 41.2
Cpa.g.c39738 Carica papaya HOM05D002512 ORTHO05D002660 1.8e-20 103.2 119 44.5
Cpa.g.sc161.39 Carica papaya HOM05D002512 ORTHO05D002660 1.8e-20 103.2 119 44.5
Dinv13792 Davidia involucrata HOM05D002512 ORTHO05D002660 3.1e-20 102.4 121 43.8
QL07p017416 Quercus lobata HOM05D002512 ORTHO05D002660 4.1e-20 102.1 115 43.5
TPR.G9518 Trifolium pratense HOM05D002512 ORTHO05D002660 5.3e-20 101.7 118 38.1
AUR62030498 Chenopodium quinoa HOM05D002512 ORTHO05D002660 7.0e-20 101.3 123 41.5
AUR62030796 Chenopodium quinoa HOM05D002512 ORTHO05D002660 9.1e-20 100.9 123 41.5
Gohir.A08G219577 Gossypium hirsutum HOM05D002512 ORTHO05D002660 1.5e-19 100.1 120 40.0
Gorai.004G252400 Gossypium raimondii HOM05D002512 ORTHO05D002660 1.5e-19 100.1 120 40.0
Manes.09G136500 Manihot esculenta HOM05D002512 ORTHO05D002660 1.5e-19 100.1 115 43.5
Cc06_g21510 Coffea canephora HOM05D002512 ORTHO05D002660 2.6e-19 99.4 122 43.4
Sc01g0006280 Simmondsia chinensis HOM05D002512 ORTHO05D002660 3.5e-19 99.0 139 41.0
VMungo1383G3395 Vigna mungo HOM05D002512 ORTHO05D002660 4.5e-19 98.6 123 38.2
EL10Ac5g12554 Beta vulgaris HOM05D002512 ORTHO05D002660 7.7e-19 97.8 123 38.2
SGA_v2.0_scaffold66G22372 Striga asiatica HOM05D002512 ORTHO05D002660 1.0e-18 97.4 114 43.9
Phvul.004G049900 Phaseolus vulgaris HOM05D002512 ORTHO05D002660 1.7e-18 96.7 138 37.7
RcHm_v2.0_Chr3g0496021 Rosa chinensis HOM05D002512 ORTHO05D002660 1.7e-18 96.7 121 39.7
Ciclev10020145m.g Citrus clementina HOM05D002512 ORTHO05D002660 2.2e-18 96.3 119 40.3
VMungo0464G1911 Vigna mungo HOM05D002512 ORTHO05D002660 3.8e-18 95.5 119 40.3
GSVIVG01029963001 Vitis vinifera HOM05D002512 ORTHO05D002660 3.8e-18 95.5 114 43.9
MELO3C008866.2 Cucumis melo HOM05D002512 ORTHO05D002660 5.0e-18 95.1 118 39.8
Gohir.A08G220200 Gossypium hirsutum HOM05D002512 ORTHO05D002660 6.5e-18 94.7 120 40.0
FAN19G2212 Fragaria x ananassa HOM05D002512 ORTHO05D002660 1.9e-17 93.2 136 35.3
TAR633G2675 Trochodendron aralioides HOM05D002512 ORTHO05D002660 1.9e-17 93.2 124 41.9
MD14G1009600 Malus domestica HOM05D002512 ORTHO05D002660 2.5e-17 92.8 144 34.0
MD12G1012000 Malus domestica HOM05D002512 ORTHO05D002660 3.2e-17 92.4 116 39.7
CsaV3_4G031620 Cucumis sativus L. HOM05D002512 ORTHO05D002660 4.2e-17 92.0 113 39.8
Ca_25677_v3 Cicer arietinum L. HOM05D002512 ORTHO05D002660 5.5e-17 91.7 115 35.7
Sed0024698 Sechium edule HOM05D002512 ORTHO05D002660 9.4e-17 90.9 118 37.3
Sed0010492 Sechium edule HOM05D002512 ORTHO05D002660 1.2e-16 90.5 118 39.0
ClCG04G004670 Citrullus lanatus HOM05D002512 ORTHO05D002660 2.1e-16 89.7 118 38.1
CARHR077760 Cardamine hirsuta HOM05D002512 ORTHO05D002660 3.6e-16 89.0 144 34.0
Hund14291 Selenicereus undatus HOM05D002512 ORTHO05D002660 4.7e-16 88.6 119 37.0
vmacro07651 Vaccinium macrocarpon HOM05D002512 ORTHO05D002660 6.1e-16 88.2 120 44.2
BolC5t34987H Brassica oleracea HOM05D002512 ORTHO05D002660 1.0e-15 87.4 121 36.4
FvH4_1g29870 Fragaria vesca HOM05D002512 ORTHO05D002660 1.0e-15 87.4 121 37.2
Rhsim03G0049300 Rhododendron simsii HOM05D002512 ORTHO05D002660 1.8e-15 86.7 118 44.1
arahy.Tifrunner.gnm1.ann1.A01CJ0 Arachis hypogaea HOM05D002512 ORTHO05D002660 2.3e-15 86.3 115 37.4
arahy.Tifrunner.gnm1.ann1.SML0AN Arachis hypogaea HOM05D002512 ORTHO05D002660 2.3e-15 86.3 116 36.2
C05p63240 Brassica napus HOM05D002168 ORTHO05D002277 3.0e-15 85.9 121 35.5
Sp3g02670 Schrenkiella parvula HOM05D002512 ORTHO05D002660 3.0e-15 85.9 121 35.5
AL3G13500 Arabidopsis lyrata HOM05D002512 ORTHO05D002660 3.9e-15 85.5 129 34.9
BraA05t23105Z Brassica rapa HOM05D002512 ORTHO05D002660 3.9e-15 85.5 121 36.4
FAN26G0183 Fragaria x ananassa HOM05D002512 ORTHO05D002660 6.7e-15 84.7 136 32.4
PGR142G4348 Punica granatum HOM05D002512 ORTHO05D002660 6.7e-15 84.7 115 39.1
A05p43660 Brassica napus HOM05D002168 ORTHO05D002277 8.8e-15 84.3 121 35.5
PSO384G3577 Papaver somniferum HOM05D002512 ORTHO05D002660 2.0e-14 83.2 145 33.8
Psat3g086480 Pisum sativum HOM05D002512 ORTHO05D002660 2.0e-14 83.2 116 37.9
Actinidia03918 Actinidia chinensis HOM05D002512 ORTHO05D002660 2.6e-14 82.8 113 40.7
BcaC05g30257 Brassica carinata HOM05D002512 ORTHO05D002660 2.6e-14 82.8 121 35.5
Psat3g086440 Pisum sativum HOM05D002512 ORTHO05D002660 2.6e-14 82.8 116 37.9
Thhalv10020627m.g Eutrema salsugineum HOM05D002512 ORTHO05D002660 3.3e-14 82.4 127 33.9
AT3G03700 Arabidopsis thaliana HOM05D002512 ORTHO05D002660 4.4e-14 82.0 121 34.7
AT3G04440 Arabidopsis thaliana HOM05D002512 ORTHO05D002660 4.4e-14 82.0 121 34.7
Actinidia37822 Actinidia chinensis HOM05D002512 ORTHO05D002660 7.4e-14 81.3 113 42.5
BcaC05g30256 Brassica carinata HOM05D002512 ORTHO05D002660 9.7e-14 80.9 121 34.7
Carub.0003s0286 Capsella rubella HOM05D002512 ORTHO05D002660 2.8e-13 79.3 113 35.4
Ah.12g058690 Amaranthus hybridus HOM05D002512 ORTHO05D002660 4.8e-13 78.6 117 38.5
Aqoxy2G00567 Aquilegia oxysepala HOM05D002512 ORTHO05D002660 3.1e-12 75.9 124 34.7
Psat4g072880 Pisum sativum HOM05D002512 ORTHO05D002660 4.1e-12 75.5 118 34.7
Psat3g086520 Pisum sativum HOM05D002512 ORTHO05D002660 7.0e-12 74.7 111 36.9
THA.LOC104820797 Tarenaya hassleriana HOM05D002512 ORTHO05D002660 3.5e-11 72.4 121 32.2
THA.LOC104821149 Tarenaya hassleriana HOM05D002512 ORTHO05D002660 3.5e-11 72.4 121 32.2
Aa31LG5G14210 Aethionema arabicum HOM05D002512 ORTHO05D002660 1.3e-10 70.5 130 32.3
CANSAT78G2265 Cannabis sativa HOM05D002512 ORTHO05D002660 2.2e-10 69.7 119 36.1
Aa31LG11G11750 Aethionema arabicum HOM05D002512 ORTHO05D002660 2.9e-10 69.3 135 32.6
CARHR195340 Cardamine hirsuta HOM05D002512 ORTHO05D002660 8.5e-10 67.8 122 32.8
AL6G28920 Arabidopsis lyrata HOM05D002512 ORTHO05D002660 7.2e-09 64.7 110 35.5
AT5G17830 Arabidopsis thaliana HOM05D002512 ORTHO05D002660 1.4e-07 60.5 110 31.8
Medtr6g027560 Medicago truncatula HOM05D002512 ORTHO05D002660 1.8e-07 60.1 67 41.8
Phvul.005G035600 Phaseolus vulgaris HOM05D002512 ORTHO05D002660 7.5e-06 54.7 130 30.0
VMungo1080G0592 Vigna mungo HOM05D002512 ORTHO05D002660 7.5e-06 54.7 130 28.5


User provided reference genes

Program Settings