Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g548 Utricularia gibba HOM05D005702 ORTHO05D007080 8.7e-41 169.9 85 100.0
CiPaw.08G105700 Carya illinoinensis HOM05D005702 ORTHO05D007080 6.2e-39 163.7 85 94.1
Thhalv10008907m.g Eutrema salsugineum HOM05D005702 ORTHO05D007080 1.1e-38 162.9 85 91.8
Aa31LG1G9380 Aethionema arabicum HOM05D005702 ORTHO05D007080 1.8e-38 162.2 85 91.8
MSTRG.17448 Avicennia marina HOM05D005702 ORTHO05D007080 1.8e-38 162.2 85 92.9
Actinidia21118 Actinidia chinensis HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Actinidia24899 Actinidia chinensis HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
AUR62026977 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 92.9
AUR62029075 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 92.9
Ciclev10022184m.g Citrus clementina HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Cc01_g19390 Coffea canephora HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Duzib211G0381 Durio zibethinus HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Gohir.A08G066400 Gossypium hirsutum HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Gohir.D08G075100 Gossypium hirsutum HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Gorai.004G079400 Gossypium raimondii HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
SGA_v2.0_scaffold81G26013 Striga asiatica HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
THA.LOC104815941 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 2.4e-38 161.8 85 91.8
Aqoxy5G00486 Aquilegia oxysepala HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 91.8
AL1G12620 Arabidopsis lyrata HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
AT1G03150 Arabidopsis thaliana HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
BcaC05g24554 Brassica carinata HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
BcaC05g24631 Brassica carinata HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
A10p01770 Brassica napus HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
C05p01750 Brassica napus HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
BraA10t42452Z Brassica rapa HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
Carub.0001s0229 Capsella rubella HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
CAN.G308.71 Capsicum annuum HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
CARHR002490 Cardamine hirsuta HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
Oeu047872.1 Olea europaea HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
THA.LOC104825996 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
Thecc.01G277400 Theobroma cacao HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 90.6
GSVIVG01001156001 Vitis vinifera HOM05D005702 ORTHO05D007080 3.1e-38 161.4 85 92.9
A08p37460 Brassica napus HOM05D005702 ORTHO05D007080 4.0e-38 161.0 85 89.4
BraA08t35644Z Brassica rapa HOM05D005702 ORTHO05D007080 4.0e-38 161.0 85 89.4
CSS0013604 Camellia sinensis var. sinensis HOM05D005702 ORTHO05D007080 4.0e-38 161.0 85 89.4
Dinv34763 Davidia involucrata HOM05D005702 ORTHO05D007080 4.0e-38 161.0 85 89.4
Rhsim01G0274200 Rhododendron simsii HOM05D005702 ORTHO05D007080 4.0e-38 161.0 85 89.4
Atru.chr5.1454 Acer truncatum HOM05D005702 ORTHO05D007080 5.3e-38 160.6 85 90.6
Atru.chr5.1455 Acer truncatum HOM05D005702 ORTHO05D007080 5.3e-38 160.6 85 90.6
Duzib138G0620 Durio zibethinus HOM05D005702 ORTHO05D007080 5.3e-38 160.6 85 91.8
Lj5g0011651 Lotus japonicus HOM05D005702 ORTHO05D007080 5.3e-38 160.6 85 91.8
Potri.005G210400 Populus trichocarpa HOM05D005702 ORTHO05D007080 5.3e-38 160.6 85 91.8
TAR365G0913 Trochodendron aralioides HOM05D005702 ORTHO05D007080 5.3e-38 160.6 85 91.8
CANSAT25G3124 Cannabis sativa HOM05D005702 ORTHO05D007080 6.9e-38 160.2 85 90.6
Dinv32924 Davidia involucrata HOM05D005702 ORTHO05D007080 6.9e-38 160.2 85 89.4
Manes.01G207200 Manihot esculenta HOM05D005702 ORTHO05D007080 6.9e-38 160.2 85 90.6
Prupe.8G239800 Prunus persica HOM05D005702 ORTHO05D007080 6.9e-38 160.2 85 90.6
SalBow6G1090 Salvia bowleyana HOM05D005702 ORTHO05D007080 9.0e-38 159.8 85 92.9
vmacro14916 Vaccinium macrocarpon HOM05D005702 ORTHO05D007080 9.0e-38 159.8 85 88.2
Hund26623 Selenicereus undatus HOM05D005702 ORTHO05D007080 1.2e-37 159.5 85 90.6
Glyma.03G154800 Glycine max HOM05D005702 ORTHO05D007080 1.5e-37 159.1 85 90.6
HanXRQChr04g0118891 Helianthus annuus HOM05D005702 ORTHO05D007080 1.5e-37 159.1 85 90.6
Lj1A47G37 Lonicera japonica HOM05D005702 ORTHO05D007080 1.5e-37 159.1 85 90.6
Medtr7g117040 Medicago truncatula HOM05D005702 ORTHO05D007080 1.5e-37 159.1 85 89.4
PGR044G1983 Punica granatum HOM05D005702 ORTHO05D007080 1.5e-37 159.1 85 89.4
AUR62019565 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 91.8
ECA236G5031 Erigeron canadensis HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 90.6
Hma1.2p1_0822F.1_g224450 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 89.4
Hma1.2p1_0822F.1_g224460 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 89.4
Lsat_1_v5_gn_8_56441 Lactuca sativa HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 90.6
Sed0015744 Sechium edule HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 90.6
PGSC0003DMG400026070 Solanum tuberosum HOM05D005702 ORTHO05D007080 2.0e-37 158.7 85 89.4
arahy.Tifrunner.gnm1.ann1.DZ64CF Arachis hypogaea HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 90.6
arahy.Tifrunner.gnm1.ann1.TC3YPE Arachis hypogaea HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 90.6
Ca_09493_v3 Cicer arietinum L. HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 89.4
Gorai.004G216300 Gossypium raimondii HOM05D005702 ORTHO05D007080 2.6e-37 158.3 84 90.5
MD03G1263400 Malus domestica HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 88.2
Nn4g26287 Nelumbo nucifera HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 89.4
RcHm_v2.0_Chr6g0290851 Rosa chinensis HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 88.2
TPR.G4786 Trifolium pratense HOM05D005702 ORTHO05D007080 2.6e-37 158.3 85 90.6
MSTRG.12560 Avicennia marina HOM05D005702 ORTHO05D007080 3.4e-37 157.9 85 89.4
Cpa.g.sc52.44 Carica papaya HOM05D005702 ORTHO05D007080 3.4e-37 157.9 85 88.2
Gohir.A08G186200 Gossypium hirsutum HOM05D005702 ORTHO05D007080 3.4e-37 157.9 84 89.3
Phvul.001G152200 Phaseolus vulgaris HOM05D005702 ORTHO05D007080 3.4e-37 157.9 85 89.4
TWI59G0659 Tripterygium wilfordii HOM05D005702 ORTHO05D007080 3.4e-37 157.9 85 89.4
Gohir.D08G204300 Gossypium hirsutum HOM05D005702 ORTHO05D007080 4.5e-37 157.5 84 90.5
MD11G1284200 Malus domestica HOM05D005702 ORTHO05D007080 4.5e-37 157.5 85 88.2
Sc24g0002770 Simmondsia chinensis HOM05D005702 ORTHO05D007080 4.5e-37 157.5 85 88.2
MELO3C015828.2 Cucumis melo HOM05D005702 ORTHO05D007080 5.8e-37 157.1 85 89.4
Migut.N02047 Erythranthe guttata HOM05D005702 ORTHO05D007080 5.8e-37 157.1 85 88.2
Eucgr.K03364 Eucalyptus grandis HOM05D005702 ORTHO05D007080 5.8e-37 157.1 85 90.6
Haze_04696 Corylus avellana HOM05D005702 ORTHO05D007080 7.6e-37 156.8 82 92.7
CsaV3_7G028070 Cucumis sativus L. HOM05D005702 ORTHO05D007080 7.6e-37 156.8 85 88.2
FvH4_2g23390 Fragaria vesca HOM05D005702 ORTHO05D007080 7.6e-37 156.8 85 85.9
FAN15G2915 Fragaria x ananassa HOM05D005702 ORTHO05D007080 7.6e-37 156.8 85 85.9
FAN24G0191 Fragaria x ananassa HOM05D005702 ORTHO05D007080 7.6e-37 156.8 85 85.9
FAN27G1453 Fragaria x ananassa HOM05D005702 ORTHO05D007080 7.6e-37 156.8 85 85.9
Os03g0699400 Oryza sativa ssp. japonica HOM05D005702 ORTHO05D007080 9.9e-37 156.4 85 89.4
Psat3g003080 Pisum sativum HOM05D005702 ORTHO05D007080 1.3e-36 156.0 85 88.2
Solyc06g065230.3 Solanum lycopersicum HOM05D005702 ORTHO05D007080 1.3e-36 156.0 85 89.4
Sopen06g023720 Solanum pennellii HOM05D005702 ORTHO05D007080 1.3e-36 156.0 85 89.4
ATR0332G108 Amborella trichopoda HOM05D005702 ORTHO05D007080 2.2e-36 155.2 85 89.4
Peaxi162Scf00268g00086 Petunia axillaris HOM05D005702 ORTHO05D007080 2.2e-36 155.2 85 88.2
HPP92_023571 Vanilla planifolia HOM05D005702 ORTHO05D007080 2.9e-36 154.8 85 87.1
DCAR_012484 Daucus carota HOM05D005702 ORTHO05D007080 8.4e-36 153.3 85 85.9
CDE02G2156 Ceratophyllum demersum HOM05D005702 ORTHO05D007080 1.1e-35 152.9 85 84.7
PSO210G0941 Papaver somniferum HOM05D005702 ORTHO05D007080 1.9e-35 152.1 85 84.7
PSO832G0751 Papaver somniferum HOM05D005702 ORTHO05D007080 1.9e-35 152.1 85 84.7
Nitab4.5_0001082g0090 Nicotiana tabacum HOM05D005702 ORTHO05D007080 2.7e-34 148.3 98 76.5
Mapoly0054s0004 Marchantia polymorpha HOM05D005702 ORTHO05D007080 4.6e-34 147.5 85 81.2
SEGI_22390 Sequoiadendron giganteum HOM05D005702 ORTHO05D007080 6.0e-34 147.1 85 83.5
EL10Ac7g16708 Beta vulgaris HOM05D005702 ORTHO05D007080 1.0e-33 146.4 98 76.5
Lalb_Chr02g0142721 Lupinus albus HOM05D005702 ORTHO05D007080 1.0e-33 146.4 82 86.6
AagrBONN_evm.TU.Sc2ySwM_228.2719 Anthoceros agrestis HOM05D005702 ORTHO05D007080 1.1e-32 142.9 85 80.0
BcaC05g24556 Brassica carinata HOM05D005702 ORTHO05D007080 3.3e-32 141.4 73 89.0
FAN20G0031 Fragaria x ananassa HOM05D005702 ORTHO05D007080 5.6e-32 140.6 116 62.9
Sabra05G0160500 Salix brachista HOM05D005702 ORTHO05D007080 1.3e-31 139.4 133 59.4
Pp3c10_6780 Physcomitrium patens HOM05D005702 ORTHO05D007080 4.0e-30 134.4 85 78.8
AagrBONN_evm.TU.Sc2ySwM_368.1507 Anthoceros agrestis HOM05D005702 ORTHO05D007080 9.0e-30 133.3 82 76.8
Sp1g02180 Schrenkiella parvula HOM05D005702 ORTHO05D007080 8.4e-28 126.7 67 89.6
SMO118G0064 Selaginella moellendorffii HOM05D005702 ORTHO05D007080 9.3e-27 123.2 85 68.2
CBR_g41307 Chara braunii HOM05D005702 ORTHO05D007080 2.7e-26 121.7 85 69.4
Sabra02G0042100 Salix brachista HOM05D005702 ORTHO05D007080 8.2e-23 110.2 85 68.2
Cre08.g383150 Chlamydomonas reinhardtii HOM05D005702 ORTHO05D007080 5.3e-22 107.5 85 58.8
COL.COLO4_09081 Corchorus olitorius HOM05D005702 ORTHO05D007080 1.2e-21 106.3 55 90.9
PRCOL_00006102 Prasinoderma coloniale HOM05D005702 ORTHO05D007080 1.5e-21 105.9 79 62.0
Ah.08g211290 Amaranthus hybridus HOM05D005702 ORTHO05D007080 1.3e-20 102.8 51 96.1
MBI01_g45394_MAGBIO Magnolia biondii HOM05D005702 ORTHO05D007080 2.2e-20 102.1 117 50.4
C08p00430 Brassica napus HOM05D005702 ORTHO05D007080 4.9e-20 100.9 59 81.4
Zm00001eb054010 Zea mays HOM05D005702 ORTHO05D007080 4.9e-20 100.9 57 84.2
ClCG09G007100 Citrullus lanatus HOM05D005702 ORTHO05D007080 1.4e-19 99.4 51 92.2
VMungo1383G3274 Vigna mungo HOM05D005702 ORTHO05D007080 4.2e-19 97.8 116 51.7
Haze_26338 Corylus avellana HOM05D005702 ORTHO05D007080 2.7e-18 95.1 76 64.5
MCO07G257 Micromonas commoda HOM05D005702 ORTHO05D007080 1.8e-17 92.4 84 56.0
Potri.002G052000 Populus trichocarpa HOM05D005702 ORTHO05D007080 1.5e-08 62.8 34 85.3
Atru.chr1.1080 Acer truncatum HOM05D005702 ORTHO05D007080 1.9e-08 62.4 79 46.8
BolC8t46842H Brassica oleracea HOM05D005702 ORTHO05D007080 1.1e-06 56.6 30 93.3


User provided reference genes

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