Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g547 Utricularia gibba HOM05D005702 ORTHO05D007080 3.6e-38 161.0 75 100.0
vmacro14916 Vaccinium macrocarpon HOM05D005702 ORTHO05D007080 6.1e-30 133.7 64 92.2
MD11G1284200 Malus domestica HOM05D005702 ORTHO05D007080 3.0e-29 131.3 64 90.6
TAR365G0913 Trochodendron aralioides HOM05D005702 ORTHO05D007080 3.0e-29 131.3 64 92.2
Prupe.8G239800 Prunus persica HOM05D005702 ORTHO05D007080 3.9e-29 131.0 64 90.6
Rhsim01G0274200 Rhododendron simsii HOM05D005702 ORTHO05D007080 3.9e-29 131.0 64 90.6
Actinidia21118 Actinidia chinensis HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
CSS0013604 Camellia sinensis var. sinensis HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
Cc01_g19390 Coffea canephora HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
Dinv34763 Davidia involucrata HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
Migut.N02047 Erythranthe guttata HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
Lj1A47G37 Lonicera japonica HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
SGA_v2.0_scaffold81G26013 Striga asiatica HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
VMungo1383G3274 Vigna mungo HOM05D005702 ORTHO05D007080 8.8e-29 129.8 64 90.6
AUR62029075 Chenopodium quinoa HOM05D005702 ORTHO05D007080 1.1e-28 129.4 64 90.6
PGR044G1983 Punica granatum HOM05D005702 ORTHO05D007080 1.1e-28 129.4 64 90.6
SalBow6G1090 Salvia bowleyana HOM05D005702 ORTHO05D007080 1.5e-28 129.0 64 89.1
AUR62026977 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.0e-28 128.6 64 90.6
Ca_09493_v3 Cicer arietinum L. HOM05D005702 ORTHO05D007080 2.0e-28 128.6 64 89.1
arahy.Tifrunner.gnm1.ann1.DZ64CF Arachis hypogaea HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
arahy.Tifrunner.gnm1.ann1.TC3YPE Arachis hypogaea HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
CiPaw.08G105700 Carya illinoinensis HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
DCAR_012484 Daucus carota HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 87.5
Duzib211G0381 Durio zibethinus HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
FvH4_2g23390 Fragaria vesca HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
FAN15G2915 Fragaria x ananassa HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
FAN24G0191 Fragaria x ananassa HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
Gohir.D08G075100 Gossypium hirsutum HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
Gorai.004G079400 Gossypium raimondii HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
Nn4g26287 Nelumbo nucifera HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
RcHm_v2.0_Chr6g0290851 Rosa chinensis HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
Hund26623 Selenicereus undatus HOM05D005702 ORTHO05D007080 2.6e-28 128.3 64 89.1
EL10Ac7g16708 Beta vulgaris HOM05D005702 ORTHO05D007080 3.3e-28 127.9 64 89.1
CANSAT25G3124 Cannabis sativa HOM05D005702 ORTHO05D007080 3.3e-28 127.9 64 87.5
CsaV3_7G028070 Cucumis sativus L. HOM05D005702 ORTHO05D007080 4.4e-28 127.5 64 87.5
Duzib138G0620 Durio zibethinus HOM05D005702 ORTHO05D007080 4.4e-28 127.5 64 89.1
Thecc.01G277400 Theobroma cacao HOM05D005702 ORTHO05D007080 4.4e-28 127.5 64 89.1
Glyma.03G154800 Glycine max HOM05D005702 ORTHO05D007080 5.7e-28 127.1 64 87.5
Oeu047872.1 Olea europaea HOM05D005702 ORTHO05D007080 5.7e-28 127.1 64 87.5
Phvul.001G152200 Phaseolus vulgaris HOM05D005702 ORTHO05D007080 5.7e-28 127.1 64 87.5
Cpa.g.sc52.44 Carica papaya HOM05D005702 ORTHO05D007080 7.4e-28 126.7 64 87.5
ClCG09G007100 Citrullus lanatus HOM05D005702 ORTHO05D007080 7.4e-28 126.7 64 87.5
Ciclev10022184m.g Citrus clementina HOM05D005702 ORTHO05D007080 7.4e-28 126.7 64 87.5
Lj5g0011651 Lotus japonicus HOM05D005702 ORTHO05D007080 7.4e-28 126.7 64 87.5
Manes.01G207200 Manihot esculenta HOM05D005702 ORTHO05D007080 7.4e-28 126.7 64 87.5
Sed0015744 Sechium edule HOM05D005702 ORTHO05D007080 7.4e-28 126.7 64 87.5
COL.COLO4_09080 Corchorus olitorius HOM05D005702 ORTHO05D007080 9.7e-28 126.3 64 87.5
ECA236G5031 Erigeron canadensis HOM05D005702 ORTHO05D007080 9.7e-28 126.3 64 85.9
HanXRQChr04g0118891 Helianthus annuus HOM05D005702 ORTHO05D007080 9.7e-28 126.3 64 85.9
Lsat_1_v5_gn_8_56441 Lactuca sativa HOM05D005702 ORTHO05D007080 9.7e-28 126.3 64 85.9
MD03G1263400 Malus domestica HOM05D005702 ORTHO05D007080 9.7e-28 126.3 64 89.1
THA.LOC104815941 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 9.7e-28 126.3 64 85.9
MSTRG.17448 Avicennia marina HOM05D005702 ORTHO05D007080 1.3e-27 125.9 64 87.5
Hma1.2p1_0822F.1_g224450 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 1.3e-27 125.9 64 89.1
Lalb_Chr02g0142721 Lupinus albus HOM05D005702 ORTHO05D007080 1.3e-27 125.9 64 85.9
GSVIVG01001156001 Vitis vinifera HOM05D005702 ORTHO05D007080 1.3e-27 125.9 64 87.5
Zm00001eb054010 Zea mays HOM05D005702 ORTHO05D007080 1.3e-27 125.9 64 85.9
Gohir.A08G066400 Gossypium hirsutum HOM05D005702 ORTHO05D007080 1.7e-27 125.6 64 87.5
Gorai.004G216300 Gossypium raimondii HOM05D005702 ORTHO05D007080 1.7e-27 125.6 77 75.3
Psat3g003080 Pisum sativum HOM05D005702 ORTHO05D007080 1.7e-27 125.6 64 85.9
TPR.G4786 Trifolium pratense HOM05D005702 ORTHO05D007080 1.7e-27 125.6 64 85.9
TWI59G0659 Tripterygium wilfordii HOM05D005702 ORTHO05D007080 1.7e-27 125.6 64 87.5
Aqoxy5G00486 Aquilegia oxysepala HOM05D005702 ORTHO05D007080 2.2e-27 125.2 64 85.9
Atru.chr5.1454 Acer truncatum HOM05D005702 ORTHO05D007080 3.7e-27 124.4 64 85.9
Os03g0699400 Oryza sativa ssp. japonica HOM05D005702 ORTHO05D007080 3.7e-27 124.4 64 82.8
A08p37460 Brassica napus HOM05D005702 ORTHO05D007080 4.8e-27 124.0 64 85.9
BraA08t35644Z Brassica rapa HOM05D005702 ORTHO05D007080 4.8e-27 124.0 64 85.9
CAN.G308.71 Capsicum annuum HOM05D005702 ORTHO05D007080 4.8e-27 124.0 64 87.5
Medtr7g117040 Medicago truncatula HOM05D005702 ORTHO05D007080 4.8e-27 124.0 64 84.4
Nitab4.5_0001082g0090 Nicotiana tabacum HOM05D005702 ORTHO05D007080 4.8e-27 124.0 64 87.5
FAN27G1453 Fragaria x ananassa HOM05D005702 ORTHO05D007080 6.3e-27 123.6 64 85.9
Sabra05G0160500 Salix brachista HOM05D005702 ORTHO05D007080 6.3e-27 123.6 64 85.9
Solyc06g065230.3 Solanum lycopersicum HOM05D005702 ORTHO05D007080 6.3e-27 123.6 64 87.5
Sopen06g023720 Solanum pennellii HOM05D005702 ORTHO05D007080 6.3e-27 123.6 64 87.5
PGSC0003DMG400026070 Solanum tuberosum HOM05D005702 ORTHO05D007080 6.3e-27 123.6 64 87.5
ATR0332G108 Amborella trichopoda HOM05D005702 ORTHO05D007080 8.2e-27 123.2 64 84.4
SEGI_22390 Sequoiadendron giganteum HOM05D005702 ORTHO05D007080 8.2e-27 123.2 64 82.8
Atru.chr5.1455 Acer truncatum HOM05D005702 ORTHO05D007080 1.1e-26 122.9 64 85.9
Dinv32924 Davidia involucrata HOM05D005702 ORTHO05D007080 1.1e-26 122.9 64 85.9
AL1G12620 Arabidopsis lyrata HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
AT1G03150 Arabidopsis thaliana HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
BcaC05g24554 Brassica carinata HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
BcaC05g24631 Brassica carinata HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
A10p01770 Brassica napus HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
C05p01750 Brassica napus HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
BraA10t42452Z Brassica rapa HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
Carub.0001s0229 Capsella rubella HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
CARHR002490 Cardamine hirsuta HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
Thhalv10008907m.g Eutrema salsugineum HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
Gohir.D08G204300 Gossypium hirsutum HOM05D005702 ORTHO05D007080 1.4e-26 122.5 77 74.0
Potri.005G210400 Populus trichocarpa HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
Sp1g02180 Schrenkiella parvula HOM05D005702 ORTHO05D007080 1.4e-26 122.5 64 84.4
Eucgr.K03364 Eucalyptus grandis HOM05D005702 ORTHO05D007080 1.8e-26 122.1 64 82.8
PSO210G0941 Papaver somniferum HOM05D005702 ORTHO05D007080 1.8e-26 122.1 64 84.4
PSO832G0751 Papaver somniferum HOM05D005702 ORTHO05D007080 1.8e-26 122.1 64 84.4
THA.LOC104825996 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 5.3e-26 120.6 64 84.4
HPP92_023571 Vanilla planifolia HOM05D005702 ORTHO05D007080 9.1e-26 119.8 64 85.9
CDE02G2156 Ceratophyllum demersum HOM05D005702 ORTHO05D007080 1.5e-25 119.0 64 81.2
Aa31LG1G9380 Aethionema arabicum HOM05D005702 ORTHO05D007080 5.9e-25 117.1 66 80.3
Mapoly0054s0004 Marchantia polymorpha HOM05D005702 ORTHO05D007080 5.9e-25 117.1 64 81.2
Ah.08g211300 Amaranthus hybridus HOM05D005702 ORTHO05D007080 2.2e-24 115.2 56 91.1
Gohir.A08G186200 Gossypium hirsutum HOM05D005702 ORTHO05D007080 3.8e-24 114.4 73 72.6
Peaxi162Scf00268g00086 Petunia axillaris HOM05D005702 ORTHO05D007080 6.5e-24 113.6 71 74.6
AagrBONN_evm.TU.Sc2ySwM_368.1507 Anthoceros agrestis HOM05D005702 ORTHO05D007080 1.4e-23 112.5 63 76.2
Haze_04696 Corylus avellana HOM05D005702 ORTHO05D007080 1.4e-23 112.5 91 61.5
Pp3c10_6780 Physcomitrium patens HOM05D005702 ORTHO05D007080 1.9e-23 112.1 70 74.3
AagrBONN_evm.TU.Sc2ySwM_228.2719 Anthoceros agrestis HOM05D005702 ORTHO05D007080 9.4e-23 109.8 63 74.6
SMO118G0064 Selaginella moellendorffii HOM05D005702 ORTHO05D007080 6.7e-21 103.6 63 71.4
AUR62019565 Chenopodium quinoa HOM05D005702 ORTHO05D007080 4.8e-19 97.4 50 86.0
CBR_g41307 Chara braunii HOM05D005702 ORTHO05D007080 2.4e-18 95.1 70 64.3
Cre08.g383150 Chlamydomonas reinhardtii HOM05D005702 ORTHO05D007080 2.0e-17 92.0 64 60.9
MCO07G257 Micromonas commoda HOM05D005702 ORTHO05D007080 3.2e-15 84.7 64 54.7
PRCOL_00006102 Prasinoderma coloniale HOM05D005702 ORTHO05D007080 1.6e-14 82.4 63 58.7
Haze_26338 Corylus avellana HOM05D005702 ORTHO05D007080 6.1e-14 80.5 63 55.6
MELO3C015828.2 Cucumis melo HOM05D005702 ORTHO05D007080 1.3e-11 72.8 36 86.1
Hma1.2p1_0822F.1_g224460 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 1.3e-11 72.8 36 86.1
MBI01_g45394_MAGBIO Magnolia biondii HOM05D005702 ORTHO05D007080 3.7e-11 71.2 36 83.3
Sc24g0002770 Simmondsia chinensis HOM05D005702 ORTHO05D007080 4.8e-11 70.9 36 80.6
FAN20G0031 Fragaria x ananassa HOM05D005702 ORTHO05D007080 1.4e-10 69.3 78 48.7
Sabra02G0042100 Salix brachista HOM05D005702 ORTHO05D007080 1.8e-10 68.9 70 52.9
PSO761G0472 Papaver somniferum HOM05D005702 ORTHO05D007080 7.0e-10 67.0 71 46.5
Glyma.19G157100 Glycine max HOM05D005702 ORTHO05D007080 2.9e-08 61.6 32 81.2
PSO170G5254 Papaver somniferum HOM05D005702 ORTHO05D007080 1.1e-07 59.7 71 40.8
PSO170G3488 Papaver somniferum HOM05D024353 ORTHO05D007080 1.9e-07 58.9 69 43.5
Psat5g222360 Pisum sativum HOM05D000140 ORTHO05D000087 7.2e-07 57.0 28 82.1
PSO832G4203 Papaver somniferum HOM05D003692 ORTHO05D004295 3.6e-06 54.7 64 45.3


User provided reference genes

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