Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g541 Utricularia gibba HOM05D004010 ORTHO05D004995 7.7e-186 653.7 329 100.0
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 2.4e-99 366.3 332 59.9
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 1.0e-84 317.8 332 55.1
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 2.9e-84 316.2 331 50.2
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 5.5e-83 312.0 332 52.4
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 2.5e-80 303.1 332 47.9
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 8.2e-79 298.1 328 46.0
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 4.1e-78 295.8 330 46.1
Actinidia36109 Actinidia chinensis HOM05D004010 ORTHO05D004995 9.0e-78 294.7 330 45.2
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 1.5e-77 293.9 328 46.0
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.0e-77 293.5 329 46.8
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 2.0e-77 293.5 333 47.4
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 4.5e-77 292.4 339 46.0
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 7.6e-77 291.6 333 45.6
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 1.7e-76 290.4 329 46.2
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 2.2e-76 290.0 333 45.3
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 2.2e-76 290.0 330 45.5
Cc07_g01810 Coffea canephora HOM05D004010 ORTHO05D004995 2.9e-76 289.7 332 47.3
COL.COLO4_29096 Corchorus olitorius HOM05D004010 ORTHO05D004995 4.2e-75 285.8 330 45.2
Lju41A39T81 Lonicera japonica HOM05D004010 ORTHO05D004995 4.2e-75 285.8 334 47.0
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 5.5e-75 285.4 334 45.2
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 1.6e-74 283.9 336 46.7
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 3.6e-74 282.7 334 45.2
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 2.3e-73 280.0 332 47.6
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 3.0e-73 279.6 333 45.0
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 8.8e-73 278.1 331 45.0
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 8.8e-73 278.1 331 46.2
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 1.1e-72 277.7 331 45.3
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 1.9e-72 276.9 330 44.5
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 3.3e-72 276.2 333 44.7
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 7.4e-72 275.0 331 44.4
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 9.7e-72 274.6 331 46.2
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 9.7e-72 274.6 331 44.1
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 1.3e-71 274.2 334 44.3
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.7e-71 273.9 334 45.8
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 2.2e-71 273.5 336 44.0
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 4.8e-71 272.3 329 43.8
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 1.1e-70 271.2 333 43.8
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 4.1e-70 269.2 371 40.7
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 4.1e-70 269.2 333 43.5
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 5.3e-70 268.9 343 44.6
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 9.1e-70 268.1 328 43.3
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 1.5e-69 267.3 334 46.4
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.0e-69 266.9 331 45.0
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 1.0e-68 264.6 333 43.2
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.8e-68 262.7 331 45.9
Hund06718 Selenicereus undatus HOM05D004010 ORTHO05D004995 3.8e-68 262.7 345 41.4
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.4e-67 260.8 332 44.6
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 1.4e-67 260.8 332 41.3
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 3.2e-67 259.6 330 41.5
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 5.5e-67 258.8 333 43.2
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 7.2e-67 258.5 333 42.3
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 1.6e-66 257.3 343 41.1
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.6e-66 257.3 331 41.4
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 2.7e-66 256.5 331 42.6
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 3.6e-66 256.1 333 40.8
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 4.7e-66 255.8 329 42.6
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 6.1e-66 255.4 331 42.0
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 1.0e-65 254.6 330 41.2
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 1.4e-65 254.2 331 42.0
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 3.0e-65 253.1 330 40.9
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 3.9e-65 252.7 327 41.9
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 3.9e-65 252.7 381 40.4
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 2.6e-64 250.0 331 42.9
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 2.6e-64 250.0 331 42.3
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 1.7e-63 247.3 342 42.1
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 4.8e-63 245.7 333 41.1
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 3.1e-62 243.0 343 41.1
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 4.1e-62 242.7 337 41.5
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 4.1e-62 242.7 331 40.2
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 9.1e-62 241.5 337 40.7
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 1.2e-61 241.1 335 39.7
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 2.6e-61 240.0 333 42.9
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 3.4e-61 239.6 331 39.3
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 5.9e-61 238.8 331 40.2
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 5.9e-61 238.8 333 42.6
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 3.8e-60 236.1 333 39.6
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 8.5e-60 235.0 334 38.9
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 9.4e-59 231.5 333 38.4
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 9.4e-59 231.5 335 39.7
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 9.4e-59 231.5 335 39.7
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 9.4e-59 231.5 335 39.7
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 2.7e-58 229.9 334 38.0
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 1.8e-57 227.3 337 40.7
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 1.7e-55 220.7 336 39.9
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 1.1e-54 218.0 335 37.9
Psat2g096200 Pisum sativum HOM05D004010 ORTHO05D004995 1.8e-54 217.2 264 43.6
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 9.1e-54 214.9 347 38.6
CDE05G1248 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.9e-51 207.2 331 36.6
Prupe.3G290500 Prunus persica HOM05D004010 ORTHO05D004995 5.5e-51 205.7 342 37.4
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 1.5e-48 197.6 342 35.7
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 1.4e-46 191.0 331 35.3
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 2.4e-46 190.3 331 35.3
SEGI_20333 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 7.7e-45 185.3 341 35.8
Phvul.004G009701 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 5.9e-37 159.1 188 45.2
Atru.chr6.2281 Acer truncatum HOM05D004010 ORTHO05D004995 7.2e-35 152.1 156 48.7
Sopen00g012710 Solanum pennellii HOM05D004010 ORTHO05D004995 2.8e-34 150.2 211 38.9
HPP92_004912 Vanilla planifolia HOM05D004010 ORTHO05D004995 3.7e-31 139.8 160 45.6
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 1.3e-28 131.3 177 42.4
vmacro05456 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.9e-27 127.5 333 30.0
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 1.8e-25 120.9 346 28.3
Phvul.004G009161 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 6.8e-25 119.0 191 39.3
Cpa.g.sc108.58 Carica papaya HOM05D004010 ORTHO05D004995 4.9e-23 112.8 121 47.1
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 2.4e-22 110.5 194 37.1
Phvul.004G008861 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.6e-18 97.8 104 46.2
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 2.1e-18 97.4 271 27.3
Atru.chr6.2280 Acer truncatum HOM05D004010 ORTHO05D004995 3.5e-13 80.1 101 41.6
Phvul.004G009000 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.1e-11 75.1 122 40.2
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 1.9e-11 74.3 122 41.0


User provided reference genes

Program Settings