Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 3.9e-111 404.8 209 100.0
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 1.7e-85 319.7 198 78.8
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 7.0e-84 314.3 198 78.8
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 3.3e-81 305.4 198 75.8
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 2.8e-80 302.4 198 74.7
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 6.1e-80 301.2 198 73.7
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.3e-79 299.3 198 73.2
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.3e-79 299.3 198 73.2
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 5.2e-79 298.1 198 73.7
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 1.2e-78 297.0 198 73.2
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 2.0e-78 296.2 201 73.6
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 2.0e-78 296.2 198 72.7
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 2.6e-78 295.8 198 74.7
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 2.6e-78 295.8 200 73.0
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 5.7e-78 294.7 198 73.7
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 5.7e-78 294.7 198 72.7
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 7.5e-78 294.3 198 73.7
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 9.8e-78 293.9 198 73.7
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 9.8e-78 293.9 198 73.7
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 9.8e-78 293.9 201 72.6
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 1.3e-77 293.5 198 72.7
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 1.7e-77 293.1 198 72.7
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 1.7e-77 293.1 198 73.2
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 2.2e-77 292.7 198 73.7
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 4.9e-77 291.6 198 71.7
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 4.9e-77 291.6 198 72.2
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.1e-76 290.4 220 68.2
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 4.1e-76 288.5 212 69.3
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 4.1e-76 288.5 195 73.3
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 4.1e-76 288.5 198 72.2
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 7.0e-76 287.7 198 70.7
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 9.2e-76 287.3 195 72.3
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 9.2e-76 287.3 198 72.2
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 9.2e-76 287.3 198 70.7
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 1.2e-75 287.0 198 70.7
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 1.2e-75 287.0 198 71.7
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 4.5e-75 285.0 198 71.7
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 7.8e-75 284.3 227 65.2
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 7.8e-75 284.3 198 70.2
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 7.8e-75 284.3 198 69.2
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.0e-74 283.9 198 71.2
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 1.0e-74 283.9 198 68.7
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 1.3e-74 283.5 201 69.2
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 2.3e-74 282.7 198 70.2
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 2.3e-74 282.7 198 71.2
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 2.9e-74 282.3 198 71.2
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 2.9e-74 282.3 198 72.2
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 3.9e-74 282.0 198 69.2
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 5.0e-74 281.6 198 71.2
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 5.0e-74 281.6 198 67.2
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 6.6e-74 281.2 198 70.7
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 6.6e-74 281.2 198 70.2
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 8.6e-74 280.8 203 69.0
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 1.1e-73 280.4 201 69.2
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 1.5e-73 280.0 198 70.2
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 3.3e-73 278.9 204 69.1
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 5.6e-73 278.1 202 70.3
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 5.6e-73 278.1 198 68.7
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 7.3e-73 277.7 207 67.1
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 7.3e-73 277.7 198 68.7
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 1.2e-72 276.9 198 68.2
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 2.1e-72 276.2 198 68.7
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 3.6e-72 275.4 187 73.8
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 8.0e-72 274.2 198 68.7
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 5.2e-71 271.6 198 69.2
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 1.5e-70 270.0 198 69.2
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 2.6e-70 269.2 198 68.2
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 3.4e-70 268.9 198 66.7
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 3.4e-70 268.9 198 66.7
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 3.4e-70 268.9 198 67.7
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 9.8e-70 267.3 201 66.7
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 9.8e-70 267.3 204 66.7
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.3e-69 266.9 201 66.2
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.7e-69 266.5 204 65.2
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 1.7e-69 266.5 228 63.2
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 2.9e-69 265.8 198 67.2
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 2.9e-69 265.8 186 67.2
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 4.9e-69 265.0 198 65.2
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 8.3e-69 264.2 237 58.6
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 1.1e-68 263.8 198 65.2
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 1.4e-68 263.5 198 66.2
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 3.2e-68 262.3 198 64.6
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 3.2e-68 262.3 198 64.6
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 3.2e-68 262.3 198 63.6
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 3.2e-68 262.3 203 65.5
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 9.2e-68 260.8 195 67.2
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 4.3e-65 251.9 198 65.7
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 1.1e-63 247.3 188 67.0
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 2.3e-63 246.1 169 71.6
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 3.7e-61 238.8 160 71.2
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 3.0e-58 229.2 202 58.4
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 8.1e-56 221.1 251 49.8
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 8.1e-56 221.1 200 56.0
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 1.7e-53 213.4 198 57.6
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.2e-51 207.2 197 55.8
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.6e-51 206.8 197 55.8
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.1e-51 206.5 197 55.8
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 2.4e-47 193.0 196 57.7
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.1e-47 192.6 197 54.3
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 8.9e-47 191.0 181 56.9
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 1.2e-46 190.7 125 76.0
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 1.7e-42 176.8 111 80.2
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 5.1e-42 175.3 113 76.1
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 7.3e-41 171.4 114 74.6
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 5.8e-38 161.8 144 57.6
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 7.6e-38 161.4 133 59.4
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 1.4e-36 157.1 114 69.3
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 4.2e-28 129.0 190 41.1
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 3.9e-26 122.5 178 42.7
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 4.3e-25 119.0 175 44.0
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 1.3e-24 117.5 214 36.9
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 1.3e-24 117.5 216 37.5
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 2.1e-24 116.7 77 77.9
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 2.1e-24 116.7 104 58.7
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 3.7e-24 115.9 209 39.2
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 1.7e-21 107.1 126 50.8
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 2.5e-20 103.2 76 67.1
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 1.2e-19 100.9 72 61.1
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 2.1e-19 100.1 209 32.1
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 1.5e-17 94.0 201 37.3
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 2.5e-17 93.2 95 46.3
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 5.7e-17 92.0 194 30.9
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 1.6e-16 90.5 150 38.7
Cre08.g372000 Chlamydomonas reinhardtii HOM05D005703 ORTHO05D006643 2.7e-11 73.2 200 28.5
MCO02G267 Micromonas commoda HOM05D005703 ORTHO05D006643 1.1e-09 67.8 135 34.1
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 4.3e-09 65.9 129 33.3
Lsat_1_v5_gn_1_61800 Lactuca sativa HOM05D005428 ORTHO05D002547 5.7e-09 65.5 56 62.5
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 2.2e-08 63.5 50 64.0
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 3.1e-07 59.7 50 60.0
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 2.0e-06 57.0 66 50.0


User provided reference genes

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