Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 5.3e-101 370.9 177 100.0
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 2.3e-64 249.2 179 69.3
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 6.8e-64 247.7 162 71.6
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 6.4e-62 241.1 164 71.3
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 3.2e-61 238.8 143 76.2
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 1.7e-59 233.0 143 76.2
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 6.6e-59 231.1 137 78.1
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 8.6e-59 230.7 165 63.6
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.1e-58 230.3 158 69.0
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.1e-58 230.3 158 69.0
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 1.5e-58 229.9 184 62.0
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 1.9e-58 229.6 137 77.4
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 1.9e-58 229.6 169 65.1
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 3.3e-58 228.8 137 76.6
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 4.3e-58 228.4 172 62.8
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 4.3e-58 228.4 162 66.0
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 4.3e-58 228.4 168 64.9
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 4.3e-58 228.4 148 72.3
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 5.6e-58 228.0 182 62.6
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 9.5e-58 227.3 171 62.6
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.2e-57 226.9 137 76.6
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 1.2e-57 226.9 137 76.6
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 1.2e-57 226.9 156 69.2
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.6e-57 226.5 168 67.3
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 2.1e-57 226.1 162 66.0
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 2.1e-57 226.1 148 72.3
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 2.8e-57 225.7 170 64.1
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 3.6e-57 225.3 175 64.6
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 3.6e-57 225.3 148 71.6
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 4.7e-57 224.9 165 64.8
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 4.7e-57 224.9 137 75.9
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 6.2e-57 224.6 143 72.7
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 1.1e-56 223.8 147 72.8
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 1.4e-56 223.4 137 76.6
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 1.4e-56 223.4 137 76.6
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 1.8e-56 223.0 153 69.3
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 3.1e-56 222.2 137 75.2
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 3.1e-56 222.2 137 74.5
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 3.1e-56 222.2 137 74.5
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 3.1e-56 222.2 137 74.5
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 4.0e-56 221.9 173 61.3
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 5.2e-56 221.5 137 74.5
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 5.2e-56 221.5 137 73.7
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 6.8e-56 221.1 156 67.9
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 6.8e-56 221.1 150 69.3
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 6.8e-56 221.1 150 69.3
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 6.8e-56 221.1 137 74.5
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 6.8e-56 221.1 137 74.5
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 1.2e-55 220.3 137 74.5
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.2e-55 220.3 137 74.5
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 1.2e-55 220.3 137 74.5
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 1.5e-55 219.9 165 62.4
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 2.6e-55 219.2 143 71.3
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 4.4e-55 218.4 137 75.2
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 5.8e-55 218.0 149 69.8
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 7.6e-55 217.6 137 74.5
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 7.6e-55 217.6 151 68.9
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 9.9e-55 217.2 153 66.7
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 9.9e-55 217.2 137 73.0
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 1.3e-54 216.9 137 73.0
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 1.3e-54 216.9 137 72.3
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 1.3e-54 216.9 139 73.4
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 1.3e-54 216.9 137 72.3
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 1.7e-54 216.5 137 73.0
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 2.2e-54 216.1 137 73.7
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 2.2e-54 216.1 146 68.5
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 2.9e-54 215.7 137 71.5
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 4.9e-54 214.9 137 71.5
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 4.9e-54 214.9 149 69.1
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 6.4e-54 214.5 137 70.1
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 6.4e-54 214.5 149 67.8
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 1.1e-53 213.8 155 66.5
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 1.4e-53 213.4 148 69.6
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 1.9e-53 213.0 165 61.8
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 3.2e-53 212.2 143 68.5
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 3.2e-53 212.2 162 62.3
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 3.2e-53 212.2 170 61.2
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 5.4e-53 211.5 166 61.4
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 5.4e-53 211.5 138 71.0
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 9.2e-53 210.7 162 59.9
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 9.2e-53 210.7 155 65.2
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 1.2e-52 210.3 170 57.6
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 1.6e-52 209.9 138 70.3
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 2.1e-52 209.5 155 65.8
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 6.0e-52 208.0 155 65.8
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 1.0e-51 207.2 165 61.2
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 1.7e-51 206.5 123 78.0
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 3.0e-51 205.7 137 67.9
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 6.6e-51 204.5 154 64.9
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 8.6e-51 204.1 123 76.4
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.9e-50 203.0 138 65.2
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 1.9e-50 203.0 147 62.6
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 5.6e-50 201.4 136 64.0
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 4.7e-49 198.4 144 63.9
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 1.4e-48 196.8 162 59.9
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 1.8e-48 196.4 167 59.3
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 2.4e-48 196.1 156 58.3
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 5.2e-48 194.9 145 65.5
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 5.2e-48 194.9 145 65.5
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 6.8e-48 194.5 210 51.0
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 2.6e-47 192.6 137 65.0
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 3.4e-47 192.2 156 61.5
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 4.4e-47 191.8 145 64.1
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 4.4e-47 191.8 155 59.4
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 9.9e-47 190.7 145 64.1
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 9.9e-47 190.7 145 64.1
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 9.9e-47 190.7 145 64.1
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 1.3e-46 190.3 146 63.7
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 1.7e-46 189.9 145 64.1
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 3.8e-46 188.7 161 57.1
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 6.4e-46 188.0 148 62.8
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 6.4e-46 188.0 160 58.1
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 2.4e-45 186.0 145 60.7
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 7.1e-45 184.5 136 60.3
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 9.3e-45 184.1 145 61.4
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 2.1e-44 183.0 156 53.8
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 6.6e-43 177.9 124 66.9
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 5.6e-42 174.9 165 53.3
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 6.2e-41 171.4 131 64.9
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 1.4e-37 160.2 160 51.2
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 1.1e-34 150.6 131 58.0
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 1.3e-33 147.1 149 51.0
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 1.6e-33 146.7 156 46.2
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 1.1e-32 144.1 150 47.3
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 5.8e-31 138.3 95 66.3
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 6.4e-30 134.8 88 70.5
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 3.7e-25 119.0 101 62.4
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 2.5e-21 106.3 151 38.4
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 1.0e-19 100.9 164 34.1
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 1.6e-17 93.6 144 32.6
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 7.9e-12 74.7 49 73.5
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 1.1e-08 64.3 75 42.7
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 1.5e-07 60.5 45 62.2
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 1.7e-06 57.0 51 56.9


User provided reference genes

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