Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 0.0e+00 2053.5 1064 100.0
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 0.0e+00 1100.9 1271 50.7
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 8.5e-303 1043.9 1256 49.7
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 5.9e-288 994.6 1279 47.9
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 5.8e-251 871.7 1277 42.5
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 1.1e-246 857.4 1270 42.3
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.9e-246 856.7 1296 41.7
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 3.6e-245 852.4 1267 42.0
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 1.4e-244 850.5 1270 42.0
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 5.2e-244 848.6 1296 41.5
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 7.8e-240 834.7 1265 41.2
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 8.7e-239 831.2 1274 41.1
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.1e-238 830.9 1296 41.0
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 9.6e-238 827.8 1304 40.9
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 1.6e-237 827.0 1314 39.9
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 2.2e-234 816.6 1300 40.5
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 2.9e-234 816.2 1272 39.2
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 3.5e-232 809.3 1254 41.7
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 3.0e-231 806.2 1255 39.8
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 2.5e-230 803.1 1299 39.6
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 2.8e-229 799.7 1269 40.8
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 6.2e-229 798.5 1292 39.6
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 1.1e-228 797.7 1299 39.3
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 3.2e-225 786.2 1259 39.8
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.5e-225 785.4 1281 38.9
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 7.1e-225 785.0 1292 39.0
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 1.9e-222 776.9 1300 38.8
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 2.5e-222 776.5 1295 39.0
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 4.3e-222 775.8 1295 38.6
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 6.2e-221 771.9 1248 39.6
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.1e-220 771.2 1288 39.1
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 1.4e-220 770.8 1289 38.9
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 1.8e-220 770.4 1286 38.9
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 7.6e-219 765.0 1290 39.1
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 7.6e-219 765.0 1289 37.7
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 1.0e-218 764.6 1296 38.3
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 4.9e-218 762.3 1295 38.1
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 8.4e-218 761.5 1252 38.2
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 1.1e-217 761.1 1276 37.8
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 4.2e-217 759.2 1287 38.3
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 4.2e-217 759.2 1274 38.6
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 5.5e-217 758.8 1294 38.5
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 2.1e-216 756.9 1287 38.2
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 2.7e-216 756.5 1287 38.2
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 2.7e-216 756.5 1294 38.0
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 7.9e-216 755.0 1265 37.5
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 3.9e-215 752.7 1283 37.3
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 3.3e-214 749.6 1251 37.1
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 4.3e-214 749.2 1300 37.0
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 7.4e-214 748.4 1309 37.7
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 2.2e-213 746.9 1261 38.5
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 3.7e-213 746.1 1291 38.0
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 4.8e-213 745.7 1243 37.1
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 6.3e-213 745.3 1288 36.8
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.1e-212 744.6 1237 36.9
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 5.3e-212 742.3 1093 42.7
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 1.5e-211 740.7 1279 38.1
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 2.0e-211 740.3 1301 36.4
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.6e-211 740.0 1259 36.8
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 2.6e-211 740.0 1275 36.5
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.0e-210 735.7 1224 38.8
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 6.5e-210 735.3 1275 37.2
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 2.5e-209 733.4 1292 37.4
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 9.4e-209 731.5 1287 36.8
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 1.6e-208 730.7 1287 36.9
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 4.6e-208 729.2 1297 36.9
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 6.1e-208 728.8 1283 36.7
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 1.4e-207 727.6 1228 40.3
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 8.8e-207 724.9 1299 36.3
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 4.3e-206 722.6 1258 38.2
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 2.2e-205 720.3 1281 36.5
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 4.1e-204 716.1 1240 38.2
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 2.6e-203 713.4 1292 36.2
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 1.7e-202 710.7 1287 36.3
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 3.2e-201 706.4 1212 36.4
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.2e-200 704.5 1183 39.1
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 1.0e-199 701.4 1281 36.6
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 1.1e-196 691.4 1273 36.5
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 3.4e-195 686.4 1293 36.7
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 1.0e-194 684.9 721 51.7
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 1.6e-192 677.6 1210 37.8
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 4.7e-192 676.0 726 51.2
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 1.5e-190 671.0 715 52.4
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 5.7e-190 669.1 1268 35.0
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 9.7e-190 668.3 1267 35.0
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 1.3e-189 667.9 1256 35.1
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 3.1e-188 663.3 1267 34.9
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 2.0e-187 660.6 1266 35.1
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 3.8e-186 656.4 1214 35.3
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 8.5e-186 655.2 1075 39.7
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 4.2e-177 626.3 883 42.6
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 9.5e-169 598.6 1226 33.1
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 1.8e-167 594.3 1046 38.0
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 3.5e-163 580.1 870 42.1
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 7.5e-158 562.4 782 43.2
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 2.7e-155 553.9 1068 34.1
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 6.0e-155 552.7 784 42.2
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 3.3e-145 520.4 621 46.1
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 1.7e-141 508.1 1025 34.9
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 2.1e-139 501.1 627 43.7
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 2.4e-132 477.6 720 38.3
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 3.2e-132 477.2 1145 30.7
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 1.9e-129 468.0 614 41.9
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 4.9e-125 453.4 746 36.2
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 2.2e-117 427.9 608 40.1
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 3.3e-113 414.1 488 50.4
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 5.6e-113 413.3 361 62.9
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 5.3e-95 353.6 466 42.3
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 5.9e-86 323.6 342 53.8
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 1.0e-85 322.8 345 53.9
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 4.2e-84 317.4 341 53.4
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 7.9e-83 313.2 410 42.7
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 3.7e-64 251.1 500 30.0
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 8.3e-64 250.0 287 47.0
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 5.2e-58 230.7 495 31.3
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 7.7e-54 216.9 308 41.9
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-53 214.2 387 32.6
Cpa.g.sc6.25 Carica papaya HOM05D000726 ORTHO05D007554 4.3e-44 184.5 366 32.5
SEGI_24863 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 1.8e-42 179.1 292 34.2
Glyma.11G048366 Glycine max HOM05D000726 ORTHO05D007554 8.3e-40 170.2 344 34.3
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.8e-34 152.5 309 31.7
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 2.1e-27 129.0 211 36.5
RcHm_v2.0_Chr2g0138441 Rosa chinensis HOM05D000726 ORTHO05D007554 5.2e-26 124.4 234 38.0
ATR0208G027 Amborella trichopoda HOM05D000726 ORTHO05D007554 6.0e-22 110.9 311 29.6
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 6.0e-14 84.3 203 29.6
SEGI_23696 Sequoiadendron giganteum HOM05D000726 ORTHO05D000001 3.0e-13 82.0 281 28.1
Nn1g04577 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.6e-11 76.3 114 33.3
Lsat_1_v5_gn_2_113660 Lactuca sativa HOM05D000726 ORTHO05D007554 1.1e-07 63.5 61 47.5


User provided reference genes

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