Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 8.6e-79 297.0 155 100.0
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 4.3e-54 214.9 156 75.6
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.6e-53 213.0 127 85.0
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.2e-53 211.1 157 72.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 6.2e-53 211.1 136 79.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 6.2e-53 211.1 127 81.9
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 8.1e-53 210.7 144 75.7
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 8.1e-53 210.7 155 69.7
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 8.1e-53 210.7 146 72.6
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 8.1e-53 210.7 128 82.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.1e-52 210.3 118 89.0
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 1.1e-52 210.3 136 80.1
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.1e-52 210.3 156 72.4
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.4e-52 209.9 128 80.5
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.4e-52 209.9 136 77.2
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 1.8e-52 209.5 124 83.1
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 136 79.4
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 136 79.4
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 1.8e-52 209.5 126 81.7
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.4e-52 209.1 130 80.0
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.1e-52 208.8 127 83.5
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.1e-52 208.8 127 83.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 4.0e-52 208.4 156 71.8
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 4.0e-52 208.4 124 83.1
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 4.0e-52 208.4 141 77.3
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 5.2e-52 208.0 116 87.9
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 5.2e-52 208.0 155 73.5
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.2e-52 208.0 132 80.3
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 5.2e-52 208.0 125 84.0
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 5.2e-52 208.0 149 73.2
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.8e-52 207.6 116 87.1
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 6.8e-52 207.6 152 71.7
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 8.9e-52 207.2 138 78.3
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.2e-51 206.8 146 74.7
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.5e-51 206.5 116 87.1
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.5e-51 206.5 116 87.1
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.0e-51 206.1 116 87.9
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 2.6e-51 205.7 134 76.9
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 129 82.2
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 126 81.0
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.4e-51 205.3 136 77.9
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 4.4e-51 204.9 145 72.4
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 5.8e-51 204.5 139 76.3
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.8e-51 204.5 117 85.5
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 7.6e-51 204.1 136 76.5
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 7.6e-51 204.1 129 77.5
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 119 84.9
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.3e-50 203.4 116 84.5
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 1.7e-50 203.0 156 71.2
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 1.7e-50 203.0 116 86.2
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 2.2e-50 202.6 134 79.1
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.2e-50 202.6 148 72.3
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 2.9e-50 202.2 116 83.6
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.9e-50 202.2 154 71.4
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.9e-50 202.2 139 74.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 3.8e-50 201.8 125 79.2
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 3.8e-50 201.8 137 76.6
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 3.8e-50 201.8 159 68.6
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 4.9e-50 201.4 121 83.5
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 4.9e-50 201.4 115 87.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 8.4e-50 200.7 156 68.6
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 8.4e-50 200.7 156 68.6
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 8.4e-50 200.7 116 82.8
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.1e-49 200.3 123 79.7
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.1e-49 200.3 118 83.1
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.1e-49 200.3 115 86.1
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.1e-49 200.3 115 86.1
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.9e-49 199.5 116 82.8
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 2.4e-49 199.1 135 77.0
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.4e-49 199.1 126 81.0
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 2.4e-49 199.1 145 73.1
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 2.4e-49 199.1 145 73.1
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 4.2e-49 198.4 134 75.4
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 5.4e-49 198.0 116 85.3
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 5.4e-49 198.0 124 79.8
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.4e-49 198.0 140 74.3
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 7.1e-49 197.6 136 75.0
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.2e-48 196.8 141 74.5
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 1.6e-48 196.4 123 80.5
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.6e-48 196.4 156 66.7
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 2.1e-48 196.1 118 83.1
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.7e-48 195.7 116 80.2
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.7e-48 195.7 120 80.0
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 3.5e-48 195.3 135 75.6
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 6.0e-48 194.5 117 83.8
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 6.0e-48 194.5 116 84.5
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 1.0e-47 193.7 136 75.0
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.9e-47 191.8 156 66.0
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.1e-46 190.3 114 86.0
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 6.9e-44 181.0 131 72.5
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 5.1e-39 164.9 121 70.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 6.6e-39 164.5 118 70.3
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 4.3e-38 161.8 124 68.5
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 4.8e-37 158.3 104 74.0
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.1e-36 155.6 127 64.6
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.1e-36 155.6 147 58.5
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 5.3e-36 154.8 129 65.1
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.2e-35 153.7 128 64.1
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.6e-35 152.5 110 70.9
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 2.6e-35 152.5 105 72.4
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 9.9e-35 150.6 126 63.5
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 3.8e-34 148.7 118 66.9
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 3.8e-34 148.7 90 77.8
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 8.4e-34 147.5 126 65.1
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 8.4e-34 147.5 117 65.0
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.9e-33 146.4 113 65.5
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.8e-31 139.8 97 71.1
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.6e-29 133.3 131 55.7
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.3e-14 82.0 64 70.3
unitig_60.g25541 Utricularia gibba HOM05D007050 ORTHO05D008849 1.6e-13 80.1 95 52.6
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.8e-12 76.6 68 55.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.2e-11 73.9 105 41.0


User provided reference genes

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