Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 1.5e-133 479.6 242 100.0
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 6.2e-76 288.1 254 56.3
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 2.4e-75 286.2 258 55.0
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 5.3e-75 285.0 264 54.2
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 1.9e-72 276.6 262 53.4
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 6.7e-70 268.1 243 55.6
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.1e-67 260.8 256 53.5
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.4e-67 260.4 261 51.0
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 6.9e-67 258.1 261 50.6
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 6.9e-67 258.1 252 52.0
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 3.4e-66 255.8 264 51.1
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 3.4e-66 255.8 253 52.6
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 4.5e-66 255.4 250 52.8
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.8e-66 255.0 237 54.9
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 7.6e-66 254.6 255 51.0
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 7.6e-66 254.6 256 50.8
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 7.6e-66 254.6 260 51.5
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 2.9e-65 252.7 264 50.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.8e-65 252.3 254 53.1
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 3.8e-65 252.3 260 51.2
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 4.9e-65 251.9 264 49.6
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 4.9e-65 251.9 251 49.0
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 6.5e-65 251.5 264 48.5
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 8.4e-65 251.1 235 54.9
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 8.4e-65 251.1 259 48.3
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 9.3e-64 247.7 255 50.6
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 9.3e-64 247.7 263 47.9
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 1.6e-63 246.9 255 49.4
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 2.1e-63 246.5 248 50.0
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 3.5e-63 245.7 250 50.4
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 6.0e-63 245.0 229 55.9
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 1.0e-62 244.2 250 50.4
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.3e-62 243.8 248 49.2
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 1.8e-62 243.4 252 48.8
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 2.3e-62 243.0 261 48.3
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 3.9e-62 242.3 250 50.0
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 3.9e-62 242.3 253 49.8
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 5.1e-62 241.9 246 49.6
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 5.1e-62 241.9 252 50.0
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 6.7e-62 241.5 246 50.4
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 6.7e-62 241.5 246 50.4
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 6.7e-62 241.5 246 50.4
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 6.7e-62 241.5 250 50.0
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.1e-61 240.7 255 48.6
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.5e-61 240.4 247 47.0
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 1.9e-61 240.0 259 46.3
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.5e-61 239.6 248 49.2
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 2.5e-61 239.6 262 46.2
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 3.3e-61 239.2 253 49.4
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.3e-61 239.2 250 49.6
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 3.3e-61 239.2 259 49.0
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 3.3e-61 239.2 262 48.1
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 4.3e-61 238.8 255 47.5
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 4.3e-61 238.8 261 49.0
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 5.7e-61 238.4 255 49.8
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 5.7e-61 238.4 257 47.9
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 7.4e-61 238.0 250 48.8
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 7.4e-61 238.0 248 48.8
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 2.1e-60 236.5 257 47.1
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 2.8e-60 236.1 254 46.5
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 2.8e-60 236.1 251 47.4
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.8e-60 235.3 241 49.0
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 6.2e-60 235.0 201 57.7
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 2.4e-59 233.0 229 51.5
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 2.4e-59 233.0 251 49.4
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 2.4e-59 233.0 256 47.3
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 1.2e-58 230.7 260 45.4
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 5.8e-58 228.4 251 48.2
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 1.1e-56 224.2 247 47.4
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 2.5e-56 223.0 263 44.5
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 3.2e-56 222.6 208 52.4
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 3.5e-55 219.2 228 50.0
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 1.0e-54 217.6 258 44.2
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.8e-54 216.9 259 43.2
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.5e-53 213.8 215 50.7
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 3.3e-53 212.6 203 52.2
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 5.7e-53 211.8 256 42.2
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 7.4e-53 211.5 192 54.7
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.1e-51 205.7 193 49.7
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 5.3e-51 205.3 254 41.7
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 2.2e-49 199.9 203 47.3
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 2.9e-49 199.5 249 43.4
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 3.8e-49 199.1 244 43.9
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 2.0e-45 186.8 227 47.1
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 3.3e-45 186.0 188 50.5
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 6.9e-43 178.3 198 46.5
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 2.0e-42 176.8 171 52.0
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.9e-40 170.2 193 47.2
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 2.5e-40 169.9 243 40.7
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 3.3e-37 159.5 341 30.5
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 8.2e-36 154.8 142 56.3
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.8e-35 153.7 149 52.3
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.7e-28 130.6 268 32.1
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 3.7e-28 129.4 243 35.4
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 6.3e-28 128.6 245 34.7
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 1.8e-27 127.1 276 31.2
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 1.1e-24 117.9 289 28.4
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.1e-23 113.6 111 50.5
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 2.7e-23 113.2 209 34.9
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 1.1e-19 101.3 109 48.6
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 3.1e-19 99.8 109 42.2
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.1e-19 99.4 167 38.3
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 4.0e-14 82.8 132 38.6
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 3.4e-13 79.7 104 40.4
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.2e-10 71.2 91 45.1
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 4.7e-07 59.3 44 52.3
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 2.3e-06 57.0 91 37.4
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 2.3e-06 57.0 51 49.0


User provided reference genes

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