Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 1.0e-73 280.0 149 100.0
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.4e-41 173.3 147 60.5
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 2.3e-41 172.6 138 64.5
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 1.5e-40 169.9 149 61.1
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.7e-39 166.4 137 60.6
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 6.4e-39 164.5 151 58.9
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.6e-34 148.7 151 53.6
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.8e-33 146.4 150 54.0
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 4.0e-33 145.2 151 55.6
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 4.0e-33 145.2 151 55.6
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 4.0e-33 145.2 148 52.7
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 4.0e-33 145.2 148 56.1
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 5.8e-32 141.4 147 52.4
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 5.8e-32 141.4 152 53.3
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 7.6e-32 141.0 145 55.2
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 2.2e-31 139.4 150 52.0
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 2.9e-31 139.0 150 52.0
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 1.0e-28 130.6 139 51.8
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 3.0e-28 129.0 143 49.7
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 3.3e-27 125.6 139 50.4
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 9.6e-27 124.0 141 49.6
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 6.9e-25 117.9 143 49.0
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 9.0e-25 117.5 152 42.8
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 1.5e-24 116.7 156 42.9
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 3.4e-24 115.5 140 47.1
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 5.8e-24 114.8 152 42.1
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 7.6e-24 114.4 154 40.9
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 7.6e-24 114.4 154 42.2
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 9.9e-24 114.0 154 41.6
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 1.3e-23 113.6 139 46.0
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 1.3e-23 113.6 150 42.7
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 8.4e-23 110.9 148 47.3
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 1.9e-22 109.8 137 46.7
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 1.9e-22 109.8 150 40.7
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 5.4e-22 108.2 136 47.1
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 7.1e-22 107.8 149 45.6
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 7.1e-22 107.8 143 45.5
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 9.3e-22 107.5 139 44.6
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 2.1e-21 106.3 137 40.1
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 2.1e-21 106.3 135 40.7
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 3.5e-21 105.5 140 42.1
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 3.5e-21 105.5 141 42.6
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 4.6e-21 105.1 150 43.3
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 7.8e-21 104.4 133 46.6
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 7.8e-21 104.4 133 46.6
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 7.8e-21 104.4 133 46.6
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.0e-20 104.0 150 42.0
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.0e-20 104.0 150 41.3
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.0e-20 104.0 150 40.7
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.3e-20 103.6 141 44.0
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 1.3e-20 103.6 150 41.3
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.3e-20 103.6 143 43.4
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 1.7e-20 103.2 150 40.0
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.3e-20 102.8 141 45.4
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 2.3e-20 102.8 150 41.3
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 3.0e-20 102.4 147 42.9
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 3.9e-20 102.1 142 43.0
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 5.1e-20 101.7 135 45.2
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 6.6e-20 101.3 141 44.0
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 8.7e-20 100.9 133 41.4
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 8.7e-20 100.9 145 43.4
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 1.1e-19 100.5 160 40.0
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 1.5e-19 100.1 125 46.4
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 1.5e-19 100.1 150 38.7
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.9e-19 99.8 163 39.3
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.9e-19 99.8 127 45.7
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 7.3e-19 97.8 125 47.2
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 7.3e-19 97.8 150 40.0
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.3e-18 97.1 130 44.6
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 1.3e-18 97.1 151 41.1
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 1.6e-18 96.7 136 44.1
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.8e-18 95.9 143 42.7
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 2.8e-18 95.9 150 37.3
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 4.8e-18 95.1 100 51.0
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.1e-17 94.0 136 41.2
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 2.4e-17 92.8 127 44.1
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.1e-17 92.4 137 40.9
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.0e-17 92.0 127 44.1
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 4.0e-17 92.0 151 39.1
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.3e-17 91.7 127 44.1
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 5.3e-17 91.7 152 38.8
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 6.9e-17 91.3 127 43.3
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 6.9e-17 91.3 152 39.5
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 6.9e-17 91.3 146 38.4
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 9.0e-17 90.9 147 40.1
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 9.0e-17 90.9 147 40.1
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.2e-16 90.5 177 36.7
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.5e-16 88.6 127 43.3
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 1.3e-15 87.0 97 52.6
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 1.7e-15 86.7 155 38.1
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 2.9e-15 85.9 150 42.0
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.1e-14 84.0 100 50.0
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 4.2e-14 82.0 139 37.4
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 1.2e-13 80.5 152 37.5
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 2.7e-13 79.3 102 49.0
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 6.7e-12 74.7 140 33.6
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 1.4e-09 67.0 104 38.5
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 1.4e-09 67.0 164 28.7
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 2.2e-07 59.7 104 32.7
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.9e-07 59.3 73 41.1
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 2.9e-07 59.3 69 50.7
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 3.2e-06 55.8 114 34.2


User provided reference genes

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