Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 0.0e+00 1147.9 590 100.0
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.2e-120 438.0 511 50.9
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 3.4e-99 366.7 605 41.3
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 2.4e-97 360.5 612 41.3
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 2.3e-95 354.0 605 39.7
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.5e-94 351.3 597 40.5
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.0e-92 345.1 642 39.4
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.0e-92 343.2 596 40.8
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.4e-89 334.7 606 41.4
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.8e-89 334.3 609 40.7
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 4.1e-89 333.2 641 39.5
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 4.1e-89 333.2 611 40.8
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 5.6e-86 322.8 623 38.4
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.6e-86 322.8 607 38.2
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 5.6e-86 322.8 614 40.1
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.6e-85 321.2 597 38.7
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.0e-84 318.5 628 38.5
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 6.8e-84 315.8 620 38.5
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 9.8e-83 312.0 584 39.6
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.7e-82 311.2 611 39.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 3.7e-82 310.1 634 37.2
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 1.1e-81 308.5 602 37.7
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.4e-81 307.4 612 39.9
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 7.0e-81 305.8 613 37.5
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 2.0e-80 304.3 633 38.4
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.7e-80 303.9 627 36.7
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 6.0e-80 302.8 615 40.2
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 7.8e-80 302.4 603 38.6
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.0e-79 302.0 616 37.8
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.0e-79 302.0 600 38.3
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 3.0e-79 300.4 308 55.5
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 6.6e-79 299.3 613 38.7
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.5e-78 298.1 598 37.6
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 2.5e-78 297.4 628 36.3
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 4.3e-78 296.6 593 36.4
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.3e-78 296.6 621 36.4
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 2.1e-77 294.3 608 38.7
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 4.7e-77 293.1 621 38.0
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 6.2e-77 292.7 615 36.9
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 8.0e-77 292.4 649 35.9
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.1e-76 292.0 608 38.5
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.1e-76 292.0 270 61.5
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.4e-76 291.6 611 36.2
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 2.3e-76 290.8 609 37.9
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 8.9e-76 288.9 638 36.4
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 8.9e-76 288.9 614 35.5
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.5e-75 288.1 616 36.0
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 2.0e-75 287.7 616 35.9
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.0e-75 287.7 256 59.8
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.6e-75 287.3 618 37.4
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 2.6e-75 287.3 599 37.6
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.6e-75 287.3 620 36.1
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 3.4e-75 287.0 617 37.3
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 4.4e-75 286.6 636 35.5
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.8e-75 285.4 625 36.8
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.3e-74 285.0 628 36.8
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.3e-74 285.0 634 36.0
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 2.2e-74 284.3 486 42.4
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 3.2e-73 280.4 618 39.0
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.2e-73 280.4 618 35.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 4.1e-73 280.0 649 35.6
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 5.4e-73 279.6 624 36.2
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 5.4e-73 279.6 350 49.1
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 7.0e-73 279.3 625 36.6
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 7.0e-73 279.3 616 36.4
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.0e-71 275.4 631 35.2
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.3e-71 275.0 630 35.9
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.3e-71 275.0 619 35.1
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.7e-71 274.6 623 36.9
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.3e-71 274.2 593 36.8
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.0e-71 273.9 609 36.3
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 8.6e-71 272.3 604 34.8
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.1e-70 271.9 264 56.4
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.5e-70 271.6 608 35.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 4.3e-70 270.0 311 50.5
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 5.6e-70 269.6 354 48.0
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.5e-70 268.9 273 52.4
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 4.7e-69 266.5 273 54.9
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 6.8e-68 262.7 621 35.7
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 1.5e-67 261.5 598 35.5
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 2.6e-67 260.8 615 35.6
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 5.8e-67 259.6 626 35.3
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 5.8e-67 259.6 272 56.2
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.2e-66 257.7 331 50.2
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.2e-66 257.7 619 36.2
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-66 257.7 609 36.3
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 4.9e-66 256.5 613 35.6
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.1e-65 255.4 618 34.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 3.5e-64 250.4 240 55.8
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 6.0e-64 249.6 599 34.6
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 7.8e-64 249.2 272 53.3
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.0e-63 248.8 260 53.8
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.7e-63 248.1 610 34.3
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-63 248.1 622 35.2
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 3.0e-63 247.3 587 34.4
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 3.9e-63 246.9 599 33.6
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.1e-62 245.4 283 54.1
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.5e-62 245.0 630 33.0
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.5e-62 244.2 237 56.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 9.5e-62 242.3 587 34.2
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 3.6e-61 240.4 285 50.9
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 8.1e-61 239.2 297 52.5
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 3.1e-60 237.3 628 31.4
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 6.8e-60 236.1 615 34.6
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 8.9e-60 235.7 234 59.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.2e-59 235.3 562 35.1
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.0e-59 234.6 599 34.7
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 4.4e-59 233.4 248 53.6
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.2e-58 231.1 629 33.2
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 4.9e-58 229.9 626 33.2
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 6.4e-58 229.6 241 51.5
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 6.4e-58 229.6 560 32.1
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.1e-57 228.8 263 53.6
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-57 228.8 622 33.1
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.9e-57 228.0 583 34.1
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.4e-57 227.6 372 42.2
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.4e-57 227.6 588 34.2
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.2e-57 227.3 269 50.6
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.2e-56 225.3 588 33.5
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.5e-56 223.8 264 53.4
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 4.6e-56 223.4 628 32.8
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.8e-56 222.6 270 49.3
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 1.0e-55 222.2 586 33.3
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.0e-55 222.2 250 49.6
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.3e-55 221.9 598 33.3
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.7e-55 221.5 586 31.4
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.7e-55 221.5 559 31.8
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 2.3e-55 221.1 617 33.7
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 5.1e-55 219.9 597 31.7
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 1.5e-54 218.4 585 31.6
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.5e-54 218.4 728 30.5
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.3e-54 216.9 621 32.9
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 9.6e-54 215.7 590 32.7
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.6e-54 215.7 626 32.3
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.4e-52 211.8 586 31.2
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.4e-52 211.8 590 32.2
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.8e-52 211.5 268 47.4
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.4e-52 211.1 260 51.9
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.4e-52 211.1 585 30.3
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 3.4e-51 207.2 586 32.3
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.7e-50 204.9 592 30.9
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 3.8e-50 203.8 251 49.0
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 1.1e-49 202.2 593 31.7
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.1e-49 202.2 273 46.5
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 6.0e-48 196.4 676 30.8
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 3.9e-47 193.7 286 40.2
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 5.1e-47 193.4 637 30.8
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 8.7e-47 192.6 235 46.4
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.4e-44 184.5 220 50.5
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.5e-43 181.8 270 44.4
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.2e-32 145.6 506 30.8
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 4.6e-32 143.7 144 62.5
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.0e-31 141.0 114 57.0
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.7e-26 125.2 183 50.3
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 7.1e-25 119.8 298 35.2
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.1e-24 118.2 114 51.8
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 3.5e-24 117.5 134 52.2
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 7.9e-24 116.3 207 39.6
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.1e-20 104.0 144 47.9
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 7.7e-19 99.8 287 30.3
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 2.2e-18 98.2 412 27.4
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.8e-15 88.6 155 45.2
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 8.2e-13 79.7 78 61.5
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.9e-09 68.6 391 25.8
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.6e-08 64.3 373 24.9


User provided reference genes

Program Settings