Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g437 Utricularia gibba HOM05D004875 ORTHO05D005598 3.8e-260 901.0 459 100.0
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.9e-150 536.6 533 55.3
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 3.7e-146 522.3 537 53.6
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 1.7e-143 513.5 535 52.9
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.3e-138 497.3 528 51.3
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 7.5e-131 471.5 516 50.4
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 3.2e-129 466.1 535 48.6
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 4.6e-128 462.2 507 49.9
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 5.6e-126 455.3 536 47.6
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 3.1e-124 449.5 531 46.5
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 1.1e-121 441.0 535 44.7
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.4e-121 440.7 525 47.4
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 1.4e-121 440.7 534 46.1
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.9e-121 440.3 531 46.5
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 1.9e-121 440.3 531 46.9
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 2.1e-120 436.8 537 46.2
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 7.8e-120 434.9 534 45.3
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 3.9e-119 432.6 534 46.1
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 6.6e-119 431.8 531 45.4
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 1.1e-118 431.0 531 46.1
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.1e-118 431.0 534 44.8
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 4.3e-118 429.1 531 44.4
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 7.3e-118 428.3 531 44.1
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 9.5e-118 427.9 531 44.4
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 9.5e-118 427.9 524 44.5
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 2.1e-117 426.8 531 44.8
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 2.1e-117 426.8 536 44.8
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 4.7e-117 425.6 532 44.5
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 1.1e-116 424.5 531 45.6
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 1.8e-116 423.7 529 44.8
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.1e-116 422.9 531 43.9
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 8.9e-116 421.4 517 44.7
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 2.6e-115 419.9 512 46.9
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 3.4e-115 419.5 538 44.4
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 3.4e-115 419.5 506 45.3
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 1.3e-114 417.5 572 43.0
Cpa.g.sc2.356 Carica papaya HOM05D004875 ORTHO05D005598 2.9e-114 416.4 532 44.5
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 2.9e-114 416.4 534 44.2
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 6.4e-114 415.2 534 44.0
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 8.4e-114 414.8 523 45.1
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.1e-113 414.5 529 44.6
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 1.1e-113 414.5 533 45.6
Peaxi162Scf00055g00107 Petunia axillaris HOM05D004875 ORTHO05D005598 1.1e-113 414.5 513 44.6
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.1e-113 414.5 532 45.1
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.2e-113 412.9 517 44.1
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 3.2e-113 412.9 531 43.7
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 4.1e-113 412.5 534 43.6
Ca_15009_v3 Cicer arietinum L. HOM05D004875 ORTHO05D005598 9.2e-113 411.4 528 44.7
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 1.0e-111 407.9 540 43.5
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 3.0e-111 406.4 526 44.3
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 3.9e-111 406.0 533 45.0
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 3.3e-110 402.9 532 44.2
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 7.3e-110 401.7 528 43.9
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 7.3e-110 401.7 532 42.7
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 9.6e-110 401.4 532 42.5
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 1.2e-109 401.0 534 43.8
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 2.1e-109 400.2 532 44.2
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 2.8e-109 399.8 531 43.9
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 3.6e-109 399.4 532 43.8
Solyc09g057920.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 1.8e-108 397.1 517 44.7
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 2.4e-108 396.7 530 42.5
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 4.0e-108 396.0 532 43.2
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 1.2e-107 394.4 535 43.6
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.5e-107 394.0 533 41.8
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 1.5e-107 394.0 525 42.3
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 2.0e-107 393.7 533 43.3
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.6e-107 393.3 523 43.0
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 4.4e-107 392.5 527 42.1
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 9.9e-107 391.3 534 42.9
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 1.3e-106 391.0 532 43.0
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 2.2e-106 390.2 531 43.7
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 4.9e-106 389.0 526 42.6
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.9e-105 387.1 533 42.2
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 3.2e-105 386.3 528 42.0
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 4.6e-104 382.5 536 40.1
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 3.0e-103 379.8 527 41.4
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 3.9e-103 379.4 532 41.7
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 1.5e-102 377.5 527 41.4
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 1.5e-102 377.5 527 41.4
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 4.3e-102 375.9 527 41.4
Oeu027574.2 Olea europaea HOM05D004875 ORTHO05D005598 5.6e-102 375.6 460 46.3
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 9.6e-102 374.8 527 41.0
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 2.1e-101 373.6 537 40.2
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 1.8e-100 370.5 536 39.7
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 7.6e-99 365.2 534 41.9
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 2.1e-93 347.1 533 37.9
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 2.8e-93 346.7 535 39.3
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 4.0e-92 342.8 510 39.8
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 1.5e-91 340.9 538 38.7
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 3.4e-91 339.7 538 38.3
Atru.chr3.4119 Acer truncatum HOM05D004875 ORTHO05D005598 2.2e-90 337.0 412 46.6
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 3.8e-90 336.3 528 39.2
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.1e-86 324.7 554 37.4
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 6.9e-84 315.5 549 38.1
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 7.6e-83 312.0 551 37.9
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 4.8e-77 292.7 301 51.2
SHI19214 Sapria himalayana HOM05D004875 ORTHO05D005598 1.0e-74 285.0 577 33.4
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 8.8e-71 271.9 565 32.0
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 2.2e-66 257.3 304 46.1
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 3.7e-61 240.0 301 44.9
MELO3C025696.2 Cucumis melo HOM05D004875 ORTHO05D005598 6.9e-60 235.7 440 37.0
Nitab4.5_0005130g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.5e-59 234.6 315 43.8
Nitab4.5_0000002g0020 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.0e-58 231.9 312 43.9
CAN.G3.43 Capsicum annuum HOM05D004875 ORTHO05D005598 8.0e-56 222.2 327 41.6
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 3.9e-55 219.9 159 65.4
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.4e-52 211.5 133 73.7
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 1.0e-50 205.3 117 81.2
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 2.5e-49 200.7 478 31.8
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 4.2e-49 199.9 568 28.7
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 1.0e-34 152.1 158 51.3
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 1.0e-31 142.1 156 44.2
MELO3C027117.2 Cucumis melo HOM05D004875 ORTHO05D005598 5.6e-25 119.8 80 66.2
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 8.9e-23 112.5 157 38.9
Lsat_1_v5_gn_9_14740 Lactuca sativa HOM05D000378 ORTHO05D005598 2.0e-19 101.3 144 42.4
BcaB03g16392 Brassica carinata HOM05D004875 ORTHO05D005598 1.8e-15 88.2 160 30.0
PSO170G5101 Papaver somniferum HOM05D004875 ORTHO05D005598 2.0e-14 84.7 389 24.2
BcaB06g26910 Brassica carinata HOM05D000375 ORTHO05D000240 9.5e-09 65.9 88 37.5
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 4.4e-06 57.0 51 58.8


User provided reference genes

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