Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 1.4e-142 509.6 255 100.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 1.6e-66 256.9 310 45.8
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 5.2e-65 251.9 340 44.4
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 9.8e-64 247.7 310 46.5
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.3e-63 247.3 320 44.1
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 1.7e-63 246.9 295 46.4
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.2e-63 246.5 330 43.3
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 6.4e-63 245.0 296 46.6
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 5.4e-62 241.9 313 46.3
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 7.0e-62 241.5 304 44.7
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.2e-61 240.7 307 44.6
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 6.0e-61 238.4 304 45.1
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 6.0e-61 238.4 312 44.6
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.5e-59 233.8 306 46.1
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 2.5e-59 233.0 316 42.1
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 4.3e-59 232.3 318 43.1
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 9.5e-59 231.1 306 45.1
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 1.2e-58 230.7 275 50.5
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.6e-58 230.3 319 42.6
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.6e-58 230.3 293 43.3
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 2.1e-58 229.9 307 42.7
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 8.1e-58 228.0 317 43.8
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.1e-57 227.6 314 42.4
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.1e-57 227.6 314 42.0
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.1e-57 227.6 314 42.0
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.1e-57 227.6 375 37.6
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.1e-57 227.6 298 45.3
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 1.4e-57 227.3 318 43.4
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 2.3e-57 226.5 320 42.8
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 5.2e-57 225.3 204 57.4
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 6.8e-57 224.9 322 42.9
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 8.9e-57 224.6 320 41.2
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.4e-56 222.6 338 38.5
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.8e-56 221.9 325 40.0
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 7.5e-56 221.5 332 39.8
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.7e-55 220.3 332 40.7
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 2.2e-55 219.9 326 41.7
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 2.9e-55 219.5 327 40.7
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 2.9e-55 219.5 311 41.2
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 4.9e-55 218.8 334 40.4
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 1.1e-54 217.6 318 40.6
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 1.4e-54 217.2 323 40.2
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.9e-54 216.9 311 40.8
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 1.9e-54 216.9 324 40.4
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 3.2e-54 216.1 313 41.5
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 9.2e-54 214.5 304 44.7
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.2e-53 214.2 318 41.2
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.6e-53 213.8 298 43.3
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 1.6e-53 213.8 326 40.5
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 2.1e-53 213.4 316 39.9
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 2.1e-53 213.4 311 39.2
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 2.1e-53 213.4 319 40.1
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.7e-53 213.0 349 37.2
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 3.5e-53 212.6 323 40.9
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.5e-53 212.6 280 43.6
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 6.0e-53 211.8 298 42.6
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 6.0e-53 211.8 346 37.3
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 7.8e-53 211.5 317 41.6
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 7.8e-53 211.5 321 38.9
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 7.8e-53 211.5 347 36.9
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.0e-52 211.1 310 40.6
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.3e-52 210.7 341 37.5
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 1.7e-52 210.3 301 41.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.7e-52 210.3 334 38.9
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 1.7e-52 210.3 307 40.1
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 3.9e-52 209.1 317 39.7
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 6.6e-52 208.4 313 39.3
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 1.5e-51 207.2 356 36.0
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 1.9e-51 206.8 299 43.5
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 4.3e-51 205.7 340 37.9
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 5.6e-51 205.3 336 38.1
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.6e-51 205.3 296 39.9
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.6e-50 203.8 339 39.2
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 1.6e-50 203.8 319 39.8
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 2.8e-50 203.0 314 39.8
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 3.6e-50 202.6 341 37.2
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.6e-50 202.6 296 39.5
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 6.2e-50 201.8 334 37.7
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 8.1e-50 201.4 363 36.4
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 8.9e-49 198.0 312 40.4
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 8.9e-49 198.0 334 37.4
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 8.9e-49 198.0 334 37.4
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 1.5e-48 197.2 328 38.1
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 4.4e-48 195.7 309 42.4
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 9.9e-48 194.5 328 39.0
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 1.7e-47 193.7 299 38.8
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 2.2e-47 193.4 337 36.5
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 2.9e-47 193.0 337 36.5
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.9e-47 192.2 296 38.9
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 6.4e-47 191.8 300 39.7
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.1e-46 191.0 337 36.2
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 1.1e-46 191.0 353 36.5
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 4.1e-46 189.1 343 35.6
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 5.4e-46 188.7 323 36.2
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 7.1e-46 188.3 337 35.6
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 7.1e-46 188.3 337 35.6
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 7.1e-46 188.3 337 35.6
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 9.2e-46 188.0 337 35.9
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 1.6e-45 187.2 360 34.7
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.1e-45 186.8 313 36.4
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.7e-44 183.7 276 41.3
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.7e-44 183.7 248 42.7
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.9e-44 182.6 226 46.5
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 5.1e-44 182.2 322 36.0
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 8.6e-44 181.4 340 34.1
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 4.3e-43 179.1 370 33.5
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.6e-42 177.2 294 38.4
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 8.1e-42 174.9 295 40.0
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 2.4e-41 173.3 375 31.7
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 2.4e-41 173.3 130 59.2
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.1e-38 164.5 324 35.8
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.0e-32 143.7 149 48.3
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.7e-29 133.3 314 31.8
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 5.3e-25 119.0 378 27.0
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.9e-23 113.2 207 34.8
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 8.4e-23 111.7 251 32.7
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 8.7e-20 101.7 345 26.1
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.2e-16 91.3 188 34.0
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 2.1e-13 80.5 304 27.3
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 2.5e-11 73.6 201 33.3
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 5.7e-11 72.4 202 31.7
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 2.1e-10 70.5 161 31.7
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.8e-09 67.4 140 35.0
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.0e-07 61.6 155 32.3
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.2e-07 60.5 205 25.9
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 3.8e-07 59.7 93 39.8
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 7.2e-06 55.5 90 35.6


User provided reference genes

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